EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000007881 (Gene tree)
Gene ID: 103669331
Gene Symbol: RTCA
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 25840 bases
Position: chrKK498637.1:4023147-4048986
Accession: 103669331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000010470	RTC	PF01137.21	1.3e-87	1	1
ENSUMAP00000010470	RTC_insert	PF05189.13	7.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000012496	RTCA-201	2710	-	ENSUMAP00000010470	366 (aa)	XP_008695879	UPI0004E01488

Gene Model

Click here to download ENSUMAG00000007881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000007881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000007881	RTCA	100	94.262	ENSG00000137996	RTCA	100	94.262	Homo_sapiens
ENSUMAG00000007881	RTCA	99	71.468	ENSAPOG00000001345	rtca	98	71.468	Acanthochromis_polyacanthus
ENSUMAG00000007881	RTCA	73	98.513	ENSAMEG00000008855	RTCA	100	98.513	Ailuropoda_melanoleuca
ENSUMAG00000007881	RTCA	99	71.468	ENSACIG00000019643	rtca	99	71.468	Amphilophus_citrinellus
ENSUMAG00000007881	RTCA	100	70.765	ENSAOCG00000014979	rtca	99	70.765	Amphiprion_ocellaris
ENSUMAG00000007881	RTCA	100	70.765	ENSAPEG00000006945	rtca	99	70.765	Amphiprion_percula
ENSUMAG00000007881	RTCA	100	69.399	ENSATEG00000006315	rtca	100	69.399	Anabas_testudineus
ENSUMAG00000007881	RTCA	96	79.379	ENSAPLG00000015430	RTCA	100	79.379	Anas_platyrhynchos
ENSUMAG00000007881	RTCA	100	93.989	ENSANAG00000025446	RTCA	100	93.989	Aotus_nancymaae
ENSUMAG00000007881	RTCA	100	69.945	ENSACLG00000020770	rtca	99	69.945	Astatotilapia_calliptera
ENSUMAG00000007881	RTCA	100	72.404	ENSAMXG00000043271	rtca	100	72.404	Astyanax_mexicanus
ENSUMAG00000007881	RTCA	100	95.628	ENSBTAG00000006321	RTCA	100	95.628	Bos_taurus
ENSUMAG00000007881	RTCA	100	93.989	ENSCJAG00000003398	RTCA	100	93.989	Callithrix_jacchus
ENSUMAG00000007881	RTCA	100	98.087	ENSCAFG00000020010	RTCA	68	98.087	Canis_familiaris
ENSUMAG00000007881	RTCA	100	98.087	ENSCAFG00020011528	RTCA	57	98.087	Canis_lupus_dingo
ENSUMAG00000007881	RTCA	100	95.902	ENSCHIG00000018937	RTCA	100	95.902	Capra_hircus
ENSUMAG00000007881	RTCA	100	93.169	ENSTSYG00000011305	RTCA	100	93.169	Carlito_syrichta
ENSUMAG00000007881	RTCA	100	93.716	ENSCCAG00000021844	RTCA	100	93.716	Cebus_capucinus
ENSUMAG00000007881	RTCA	100	91.293	ENSCATG00000019364	RTCA	100	94.498	Cercocebus_atys
ENSUMAG00000007881	RTCA	87	94.322	ENSCLAG00000006125	RTCA	100	94.322	Chinchilla_lanigera
ENSUMAG00000007881	RTCA	100	94.536	ENSCSAG00000001509	RTCA	100	94.536	Chlorocebus_sabaeus
ENSUMAG00000007881	RTCA	99	94.780	ENSCHOG00000005211	RTCA	99	94.780	Choloepus_hoffmanni
ENSUMAG00000007881	RTCA	100	83.333	ENSCPBG00000026658	RTCA	100	83.333	Chrysemys_picta_bellii
ENSUMAG00000007881	RTCA	98	56.111	ENSCING00000007875	-	98	56.111	Ciona_intestinalis
ENSUMAG00000007881	RTCA	98	54.722	ENSCSAVG00000007269	-	98	54.722	Ciona_savignyi
ENSUMAG00000007881	RTCA	100	94.262	ENSCANG00000040106	RTCA	100	94.262	Colobus_angolensis_palliatus
ENSUMAG00000007881	RTCA	73	92.193	ENSCGRG00001013163	Rtca	85	92.193	Cricetulus_griseus_chok1gshd
ENSUMAG00000007881	RTCA	98	69.444	ENSCSEG00000000530	rtca	96	69.444	Cynoglossus_semilaevis
ENSUMAG00000007881	RTCA	100	59.290	ENSCVAG00000021809	rtca	100	59.290	Cyprinodon_variegatus
ENSUMAG00000007881	RTCA	100	72.678	ENSDARG00000002215	rtca	100	72.678	Danio_rerio
ENSUMAG00000007881	RTCA	99	94.505	ENSDNOG00000000456	RTCA	99	94.505	Dasypus_novemcinctus
ENSUMAG00000007881	RTCA	100	93.443	ENSDORG00000005448	Rtca	100	93.443	Dipodomys_ordii
ENSUMAG00000007881	RTCA	99	38.398	FBgn0025630	Rtca	99	38.398	Drosophila_melanogaster
ENSUMAG00000007881	RTCA	95	54.520	ENSEBUG00000008556	rtca	97	54.520	Eptatretus_burgeri
ENSUMAG00000007881	RTCA	100	96.175	ENSEASG00005015926	RTCA	100	96.175	Equus_asinus_asinus
ENSUMAG00000007881	RTCA	100	96.175	ENSECAG00000019831	RTCA	100	96.175	Equus_caballus
ENSUMAG00000007881	RTCA	91	84.104	ENSEEUG00000001165	RTCA	100	84.104	Erinaceus_europaeus
ENSUMAG00000007881	RTCA	99	71.468	ENSELUG00000003741	rtca	99	71.468	Esox_lucius
ENSUMAG00000007881	RTCA	100	97.814	ENSFCAG00000024460	RTCA	100	97.814	Felis_catus
ENSUMAG00000007881	RTCA	93	81.471	ENSFALG00000002443	RTCA	91	81.471	Ficedula_albicollis
ENSUMAG00000007881	RTCA	98	72.652	ENSFDAG00000016084	-	100	72.652	Fukomys_damarensis
ENSUMAG00000007881	RTCA	100	93.989	ENSFDAG00000012070	-	100	93.989	Fukomys_damarensis
ENSUMAG00000007881	RTCA	70	62.109	ENSFHEG00000002868	rtca	96	69.027	Fundulus_heteroclitus
ENSUMAG00000007881	RTCA	100	68.306	ENSGMOG00000013264	rtca	100	68.306	Gadus_morhua
ENSUMAG00000007881	RTCA	100	82.240	ENSGALG00000005277	RTCA	100	82.240	Gallus_gallus
ENSUMAG00000007881	RTCA	100	71.038	ENSGAFG00000011853	rtca	99	71.038	Gambusia_affinis
ENSUMAG00000007881	RTCA	100	69.126	ENSGACG00000013497	rtca	100	69.126	Gasterosteus_aculeatus
ENSUMAG00000007881	RTCA	80	84.300	ENSGAGG00000023306	RTCA	100	84.300	Gopherus_agassizii
ENSUMAG00000007881	RTCA	100	93.443	ENSGGOG00000044018	-	100	93.443	Gorilla_gorilla
ENSUMAG00000007881	RTCA	100	94.262	ENSGGOG00000009546	-	100	94.262	Gorilla_gorilla
ENSUMAG00000007881	RTCA	100	69.672	ENSHBUG00000002114	rtca	99	69.672	Haplochromis_burtoni
ENSUMAG00000007881	RTCA	100	92.896	ENSHGLG00000002617	RTCA	100	92.896	Heterocephalus_glaber_female
ENSUMAG00000007881	RTCA	100	92.896	ENSHGLG00100006056	RTCA	100	92.896	Heterocephalus_glaber_male
ENSUMAG00000007881	RTCA	100	63.661	ENSHCOG00000020628	rtca	88	64.266	Hippocampus_comes
ENSUMAG00000007881	RTCA	100	72.678	ENSIPUG00000024803	rtca	100	72.678	Ictalurus_punctatus
ENSUMAG00000007881	RTCA	100	83.106	ENSSTOG00000033099	-	100	83.106	Ictidomys_tridecemlineatus
ENSUMAG00000007881	RTCA	100	87.705	ENSSTOG00000013528	-	100	87.705	Ictidomys_tridecemlineatus
ENSUMAG00000007881	RTCA	100	66.393	ENSJJAG00000016178	Rtca	100	66.393	Jaculus_jaculus
ENSUMAG00000007881	RTCA	99	71.745	ENSKMAG00000006651	rtca	98	71.745	Kryptolebias_marmoratus
ENSUMAG00000007881	RTCA	99	69.252	ENSLBEG00000028971	rtca	99	69.252	Labrus_bergylta
ENSUMAG00000007881	RTCA	88	68.847	ENSLBEG00000002448	-	99	68.847	Labrus_bergylta
ENSUMAG00000007881	RTCA	100	77.869	ENSLACG00000013666	RTCA	100	77.869	Latimeria_chalumnae
ENSUMAG00000007881	RTCA	100	72.678	ENSLOCG00000000093	rtca	99	72.678	Lepisosteus_oculatus
ENSUMAG00000007881	RTCA	100	93.989	ENSLAFG00000001473	RTCA	100	93.989	Loxodonta_africana
ENSUMAG00000007881	RTCA	100	94.536	ENSMFAG00000034132	RTCA	100	94.536	Macaca_fascicularis
ENSUMAG00000007881	RTCA	100	93.989	ENSMMUG00000019105	RTCA	100	93.989	Macaca_mulatta
ENSUMAG00000007881	RTCA	84	94.498	ENSMNEG00000037163	RTCA	100	94.498	Macaca_nemestrina
ENSUMAG00000007881	RTCA	100	77.596	ENSMLEG00000042151	RTCA	100	77.596	Mandrillus_leucophaeus
ENSUMAG00000007881	RTCA	100	72.951	ENSMAMG00000016536	rtca	100	72.951	Mastacembelus_armatus
ENSUMAG00000007881	RTCA	100	69.945	ENSMZEG00005017945	rtca	99	69.945	Maylandia_zebra
ENSUMAG00000007881	RTCA	87	80.878	ENSMGAG00000006892	RTCA	99	80.878	Meleagris_gallopavo
ENSUMAG00000007881	RTCA	100	91.530	ENSMAUG00000008488	Rtca	100	91.530	Mesocricetus_auratus
ENSUMAG00000007881	RTCA	84	95.469	ENSMICG00000008643	RTCA	100	95.469	Microcebus_murinus
ENSUMAG00000007881	RTCA	100	92.350	ENSMOCG00000016660	Rtca	100	92.350	Microtus_ochrogaster
ENSUMAG00000007881	RTCA	84	71.521	ENSMMOG00000007750	rtca	100	71.521	Mola_mola
ENSUMAG00000007881	RTCA	100	90.710	ENSMODG00000003557	RTCA	100	90.710	Monodelphis_domestica
ENSUMAG00000007881	RTCA	100	72.404	ENSMALG00000020844	rtca	100	72.404	Monopterus_albus
ENSUMAG00000007881	RTCA	100	90.710	MGP_CAROLIEiJ_G0025565	Rtca	100	90.710	Mus_caroli
ENSUMAG00000007881	RTCA	100	90.164	ENSMUSG00000000339	Rtca	100	90.164	Mus_musculus
ENSUMAG00000007881	RTCA	100	90.437	MGP_PahariEiJ_G0027011	Rtca	100	90.437	Mus_pahari
ENSUMAG00000007881	RTCA	100	90.437	MGP_SPRETEiJ_G0026515	Rtca	100	90.437	Mus_spretus
ENSUMAG00000007881	RTCA	100	98.361	ENSMPUG00000012119	RTCA	100	98.361	Mustela_putorius_furo
ENSUMAG00000007881	RTCA	100	88.283	ENSMLUG00000009922	RTCA	100	88.283	Myotis_lucifugus
ENSUMAG00000007881	RTCA	100	92.350	ENSNGAG00000011540	Rtca	99	92.350	Nannospalax_galili
ENSUMAG00000007881	RTCA	100	69.945	ENSNBRG00000003062	rtca	99	69.945	Neolamprologus_brichardi
ENSUMAG00000007881	RTCA	100	94.262	ENSNLEG00000031426	RTCA	100	94.262	Nomascus_leucogenys
ENSUMAG00000007881	RTCA	58	95.122	ENSMEUG00000010030	-	77	69.697	Notamacropus_eugenii
ENSUMAG00000007881	RTCA	73	87.732	ENSOPRG00000012092	RTCA	71	87.732	Ochotona_princeps
ENSUMAG00000007881	RTCA	95	93.678	ENSODEG00000006990	RTCA	96	93.732	Octodon_degus
ENSUMAG00000007881	RTCA	100	69.672	ENSONIG00000007753	rtca	99	69.672	Oreochromis_niloticus
ENSUMAG00000007881	RTCA	87	86.751	ENSOANG00000012055	RTCA	98	86.751	Ornithorhynchus_anatinus
ENSUMAG00000007881	RTCA	100	95.355	ENSOCUG00000014247	RTCA	100	95.355	Oryctolagus_cuniculus
ENSUMAG00000007881	RTCA	100	70.219	ENSORLG00000013605	rtca	100	70.219	Oryzias_latipes
ENSUMAG00000007881	RTCA	100	70.219	ENSORLG00020001904	rtca	100	70.219	Oryzias_latipes_hni
ENSUMAG00000007881	RTCA	100	70.219	ENSORLG00015021064	rtca	100	70.219	Oryzias_latipes_hsok
ENSUMAG00000007881	RTCA	100	70.765	ENSOMEG00000000756	rtca	100	70.765	Oryzias_melastigma
ENSUMAG00000007881	RTCA	100	84.973	ENSOGAG00000005627	RTCA	100	84.973	Otolemur_garnettii
ENSUMAG00000007881	RTCA	87	95.597	ENSOARG00000018122	RTCA	100	95.597	Ovis_aries
ENSUMAG00000007881	RTCA	100	91.293	ENSPPAG00000035119	RTCA	100	94.175	Pan_paniscus
ENSUMAG00000007881	RTCA	100	97.541	ENSPPRG00000000350	RTCA	100	97.541	Panthera_pardus
ENSUMAG00000007881	RTCA	100	97.541	ENSPTIG00000012816	RTCA	100	97.541	Panthera_tigris_altaica
ENSUMAG00000007881	RTCA	100	91.293	ENSPTRG00000001004	RTCA	100	94.175	Pan_troglodytes
ENSUMAG00000007881	RTCA	100	94.262	ENSPANG00000000346	RTCA	100	94.262	Papio_anubis
ENSUMAG00000007881	RTCA	100	74.044	ENSPKIG00000001653	rtca	100	74.044	Paramormyrops_kingsleyae
ENSUMAG00000007881	RTCA	100	83.607	ENSPSIG00000011408	RTCA	100	83.607	Pelodiscus_sinensis
ENSUMAG00000007881	RTCA	100	91.803	ENSPEMG00000018582	Rtca	100	91.803	Peromyscus_maniculatus_bairdii
ENSUMAG00000007881	RTCA	99	58.564	ENSPMAG00000009110	rtca	99	58.082	Petromyzon_marinus
ENSUMAG00000007881	RTCA	100	90.984	ENSPCIG00000007684	RTCA	100	90.984	Phascolarctos_cinereus
ENSUMAG00000007881	RTCA	100	71.390	ENSPFOG00000004824	rtca	100	71.390	Poecilia_formosa
ENSUMAG00000007881	RTCA	100	71.585	ENSPLAG00000011753	rtca	99	71.585	Poecilia_latipinna
ENSUMAG00000007881	RTCA	100	71.585	ENSPMEG00000020469	rtca	99	71.585	Poecilia_mexicana
ENSUMAG00000007881	RTCA	100	72.404	ENSPREG00000001365	rtca	99	72.404	Poecilia_reticulata
ENSUMAG00000007881	RTCA	100	94.262	ENSPPYG00000001115	RTCA	100	94.262	Pongo_abelii
ENSUMAG00000007881	RTCA	100	90.164	ENSPCAG00000005076	RTCA	100	90.164	Procavia_capensis
ENSUMAG00000007881	RTCA	100	96.175	ENSPCOG00000005603	RTCA	100	96.175	Propithecus_coquereli
ENSUMAG00000007881	RTCA	100	91.029	ENSPVAG00000009478	RTCA	100	91.029	Pteropus_vampyrus
ENSUMAG00000007881	RTCA	100	69.945	ENSPNYG00000004722	rtca	99	69.945	Pundamilia_nyererei
ENSUMAG00000007881	RTCA	100	72.404	ENSPNAG00000022270	rtca	100	72.404	Pygocentrus_nattereri
ENSUMAG00000007881	RTCA	100	90.984	ENSRNOG00000014575	Rtca	100	90.984	Rattus_norvegicus
ENSUMAG00000007881	RTCA	100	90.501	ENSRBIG00000041180	RTCA	100	93.528	Rhinopithecus_bieti
ENSUMAG00000007881	RTCA	100	93.716	ENSRROG00000024929	RTCA	100	93.716	Rhinopithecus_roxellana
ENSUMAG00000007881	RTCA	100	93.169	ENSSBOG00000028626	RTCA	100	93.169	Saimiri_boliviensis_boliviensis
ENSUMAG00000007881	RTCA	100	91.257	ENSSHAG00000001758	RTCA	100	91.257	Sarcophilus_harrisii
ENSUMAG00000007881	RTCA	98	68.889	ENSSMAG00000014680	rtca	97	68.889	Scophthalmus_maximus
ENSUMAG00000007881	RTCA	98	71.667	ENSSDUG00000015585	rtca	97	71.667	Seriola_dumerili
ENSUMAG00000007881	RTCA	96	72.080	ENSSLDG00000018985	rtca	95	72.080	Seriola_lalandi_dorsalis
ENSUMAG00000007881	RTCA	87	86.120	ENSSARG00000013993	RTCA	100	86.120	Sorex_araneus
ENSUMAG00000007881	RTCA	100	69.945	ENSSPAG00000011938	rtca	99	69.945	Stegastes_partitus
ENSUMAG00000007881	RTCA	100	95.902	ENSSSCG00000006865	RTCA	100	95.902	Sus_scrofa
ENSUMAG00000007881	RTCA	100	82.514	ENSTGUG00000005154	RTCA	100	82.514	Taeniopygia_guttata
ENSUMAG00000007881	RTCA	100	70.492	ENSTRUG00000008799	rtca	100	70.492	Takifugu_rubripes
ENSUMAG00000007881	RTCA	100	71.858	ENSTNIG00000004725	rtca	100	71.858	Tetraodon_nigroviridis
ENSUMAG00000007881	RTCA	59	81.818	ENSTBEG00000000943	RTCA	82	65.546	Tupaia_belangeri
ENSUMAG00000007881	RTCA	100	91.293	ENSTTRG00000015327	RTCA	100	91.293	Tursiops_truncatus
ENSUMAG00000007881	RTCA	94	97.085	ENSUAMG00000017265	RTCA	96	97.085	Ursus_americanus
ENSUMAG00000007881	RTCA	87	85.804	ENSVPAG00000001039	RTCA	84	85.804	Vicugna_pacos
ENSUMAG00000007881	RTCA	100	97.814	ENSVVUG00000022041	RTCA	68	97.814	Vulpes_vulpes
ENSUMAG00000007881	RTCA	99	65.753	ENSXETG00000031661	RTCA	99	65.753	Xenopus_tropicalis
ENSUMAG00000007881	RTCA	100	62.022	ENSXCOG00000008002	rtca	100	62.022	Xiphophorus_couchianus
ENSUMAG00000007881	RTCA	100	71.311	ENSXMAG00000005482	rtca	99	71.311	Xiphophorus_maculatus