EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000007901 (Gene tree)
Gene ID: 103669334
Gene Symbol: TRMT13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 20932 bases
Position: chrKK498637.1:4138757-4159688
Accession: 103669334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000010487	TRM13	PF05206.14	1.7e-91	1	1
ENSUMAP00000010492	TRM13	PF05206.14	3.2e-91	1	1
ENSUMAP00000010487	zf-U11-48K	PF05253.12	3.1e-09	1	1
ENSUMAP00000010492	zf-U11-48K	PF05253.12	3.5e-09	1	1
ENSUMAP00000010492	zf-TRM13_CCCH	PF11722.8	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000012516	TRMT13-201	1987	-	ENSUMAP00000010487	433 (aa)	XP_008695886	UPI0004E0297E
ENSUMAT00000012523	TRMT13-202	1905	-	ENSUMAP00000010492	481 (aa)	XP_008695884	UPI0004E013CF

Gene Model

Click here to download ENSUMAG00000007901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000007901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000007901	TRMT13	100	90.229	ENSG00000122435	TRMT13	100	90.229	Homo_sapiens
ENSUMAG00000007901	TRMT13	98	48.394	ENSAPOG00000015131	trmt13	99	49.497	Acanthochromis_polyacanthus
ENSUMAG00000007901	TRMT13	100	98.129	ENSAMEG00000008917	TRMT13	100	98.129	Ailuropoda_melanoleuca
ENSUMAG00000007901	TRMT13	98	51.598	ENSACIG00000005804	trmt13	97	50.833	Amphilophus_citrinellus
ENSUMAG00000007901	TRMT13	98	48.822	ENSAOCG00000023585	trmt13	99	49.801	Amphiprion_ocellaris
ENSUMAG00000007901	TRMT13	98	48.822	ENSAPEG00000004025	trmt13	99	49.801	Amphiprion_percula
ENSUMAG00000007901	TRMT13	99	52.675	ENSATEG00000006597	trmt13	99	52.675	Anabas_testudineus
ENSUMAG00000007901	TRMT13	97	68.750	ENSAPLG00000014924	TRMT13	99	68.750	Anas_platyrhynchos
ENSUMAG00000007901	TRMT13	98	65.340	ENSACAG00000003498	TRMT13	99	64.619	Anolis_carolinensis
ENSUMAG00000007901	TRMT13	100	90.229	ENSANAG00000019525	TRMT13	100	91.743	Aotus_nancymaae
ENSUMAG00000007901	TRMT13	99	54.318	ENSACLG00000020018	trmt13	98	53.961	Astatotilapia_calliptera
ENSUMAG00000007901	TRMT13	97	54.060	ENSAMXG00000017963	trmt13	97	55.532	Astyanax_mexicanus
ENSUMAG00000007901	TRMT13	99	92.593	ENSBTAG00000015781	TRMT13	100	91.268	Bos_taurus
ENSUMAG00000007901	TRMT13	100	88.150	ENSCJAG00000000200	TRMT13	99	91.743	Callithrix_jacchus
ENSUMAG00000007901	TRMT13	73	94.268	ENSCAFG00000020021	TRMT13	99	94.268	Canis_familiaris
ENSUMAG00000007901	TRMT13	57	95.238	ENSCAFG00020011572	TRMT13	95	94.545	Canis_lupus_dingo
ENSUMAG00000007901	TRMT13	99	92.130	ENSCHIG00000015395	TRMT13	100	91.060	Capra_hircus
ENSUMAG00000007901	TRMT13	98	80.465	ENSTSYG00000010811	TRMT13	98	86.869	Carlito_syrichta
ENSUMAG00000007901	TRMT13	84	67.769	ENSCAPG00000009085	TRMT13	100	68.320	Cavia_aperea
ENSUMAG00000007901	TRMT13	100	87.318	ENSCPOG00000000694	TRMT13	100	87.318	Cavia_porcellus
ENSUMAG00000007901	TRMT13	100	90.229	ENSCCAG00000023772	TRMT13	100	90.826	Cebus_capucinus
ENSUMAG00000007901	TRMT13	100	89.813	ENSCATG00000033556	TRMT13	100	90.826	Cercocebus_atys
ENSUMAG00000007901	TRMT13	99	83.372	ENSCLAG00000008220	TRMT13	100	83.841	Chinchilla_lanigera
ENSUMAG00000007901	TRMT13	100	90.437	ENSCSAG00000001506	TRMT13	100	90.437	Chlorocebus_sabaeus
ENSUMAG00000007901	TRMT13	99	71.991	ENSCPBG00000026671	TRMT13	100	70.270	Chrysemys_picta_bellii
ENSUMAG00000007901	TRMT13	100	90.644	ENSCANG00000034659	TRMT13	100	91.743	Colobus_angolensis_palliatus
ENSUMAG00000007901	TRMT13	99	86.279	ENSCGRG00001021601	Trmt13	99	84.615	Cricetulus_griseus_chok1gshd
ENSUMAG00000007901	TRMT13	59	82.101	ENSCGRG00000000093	-	99	82.101	Cricetulus_griseus_crigri
ENSUMAG00000007901	TRMT13	99	47.786	ENSCSEG00000000591	trmt13	97	49.015	Cynoglossus_semilaevis
ENSUMAG00000007901	TRMT13	98	49.548	ENSCVAG00000017342	trmt13	93	50.316	Cyprinodon_variegatus
ENSUMAG00000007901	TRMT13	97	56.909	ENSDARG00000102846	trmt13	96	57.235	Danio_rerio
ENSUMAG00000007901	TRMT13	57	88.768	ENSDNOG00000001710	TRMT13	84	88.768	Dasypus_novemcinctus
ENSUMAG00000007901	TRMT13	100	85.863	ENSDORG00000015808	Trmt13	99	85.863	Dipodomys_ordii
ENSUMAG00000007901	TRMT13	98	30.734	FBgn0037435	CG18048	95	31.405	Drosophila_melanogaster
ENSUMAG00000007901	TRMT13	99	76.618	ENSETEG00000005819	TRMT13	99	76.618	Echinops_telfairi
ENSUMAG00000007901	TRMT13	97	46.934	ENSEBUG00000014444	trmt13	96	46.220	Eptatretus_burgeri
ENSUMAG00000007901	TRMT13	100	92.723	ENSEASG00005015918	TRMT13	100	92.723	Equus_asinus_asinus
ENSUMAG00000007901	TRMT13	100	92.308	ENSECAG00000022626	TRMT13	100	92.308	Equus_caballus
ENSUMAG00000007901	TRMT13	79	80.380	ENSEEUG00000000294	TRMT13	80	80.380	Erinaceus_europaeus
ENSUMAG00000007901	TRMT13	98	55.581	ENSELUG00000003803	trmt13	99	55.021	Esox_lucius
ENSUMAG00000007901	TRMT13	100	93.347	ENSFCAG00000030618	TRMT13	100	96.330	Felis_catus
ENSUMAG00000007901	TRMT13	99	67.599	ENSFALG00000002424	TRMT13	99	65.900	Ficedula_albicollis
ENSUMAG00000007901	TRMT13	99	88.525	ENSFDAG00000006342	TRMT13	99	88.235	Fukomys_damarensis
ENSUMAG00000007901	TRMT13	78	52.707	ENSFHEG00000022954	trmt13	97	51.621	Fundulus_heteroclitus
ENSUMAG00000007901	TRMT13	97	48.571	ENSGMOG00000013223	trmt13	100	49.451	Gadus_morhua
ENSUMAG00000007901	TRMT13	98	67.139	ENSGALG00000005290	TRMT13	96	66.449	Gallus_gallus
ENSUMAG00000007901	TRMT13	75	51.075	ENSGAFG00000001577	trmt13	81	51.075	Gambusia_affinis
ENSUMAG00000007901	TRMT13	99	50.577	ENSGACG00000013428	trmt13	97	51.613	Gasterosteus_aculeatus
ENSUMAG00000007901	TRMT13	99	72.517	ENSGAGG00000023303	TRMT13	99	74.182	Gopherus_agassizii
ENSUMAG00000007901	TRMT13	100	90.021	ENSGGOG00000005616	TRMT13	100	90.021	Gorilla_gorilla
ENSUMAG00000007901	TRMT13	99	54.545	ENSHBUG00000007754	trmt13	99	54.123	Haplochromis_burtoni
ENSUMAG00000007901	TRMT13	99	90.164	ENSHGLG00000002164	TRMT13	99	89.916	Heterocephalus_glaber_female
ENSUMAG00000007901	TRMT13	99	90.164	ENSHGLG00100001618	TRMT13	99	89.916	Heterocephalus_glaber_male
ENSUMAG00000007901	TRMT13	98	48.122	ENSHCOG00000020553	trmt13	98	48.498	Hippocampus_comes
ENSUMAG00000007901	TRMT13	97	56.941	ENSIPUG00000024787	trmt13	98	57.576	Ictalurus_punctatus
ENSUMAG00000007901	TRMT13	100	91.060	ENSSTOG00000013483	TRMT13	100	91.060	Ictidomys_tridecemlineatus
ENSUMAG00000007901	TRMT13	100	86.902	ENSJJAG00000018012	Trmt13	100	86.902	Jaculus_jaculus
ENSUMAG00000007901	TRMT13	71	48.428	ENSKMAG00000007639	trmt13	92	48.701	Kryptolebias_marmoratus
ENSUMAG00000007901	TRMT13	99	49.661	ENSLBEG00000020238	trmt13	99	50.628	Labrus_bergylta
ENSUMAG00000007901	TRMT13	99	61.297	ENSLACG00000013153	TRMT13	100	60.891	Latimeria_chalumnae
ENSUMAG00000007901	TRMT13	97	57.109	ENSLOCG00000000418	trmt13	97	58.043	Lepisosteus_oculatus
ENSUMAG00000007901	TRMT13	85	88.378	ENSLAFG00000002383	TRMT13	100	88.378	Loxodonta_africana
ENSUMAG00000007901	TRMT13	100	90.229	ENSMFAG00000034681	TRMT13	100	91.743	Macaca_fascicularis
ENSUMAG00000007901	TRMT13	100	90.229	ENSMMUG00000004243	TRMT13	100	91.743	Macaca_mulatta
ENSUMAG00000007901	TRMT13	100	90.229	ENSMNEG00000036102	TRMT13	100	91.743	Macaca_nemestrina
ENSUMAG00000007901	TRMT13	100	90.229	ENSMLEG00000034258	TRMT13	100	92.661	Mandrillus_leucophaeus
ENSUMAG00000007901	TRMT13	99	51.131	ENSMAMG00000016597	trmt13	98	51.899	Mastacembelus_armatus
ENSUMAG00000007901	TRMT13	99	54.091	ENSMZEG00005020959	trmt13	98	53.747	Maylandia_zebra
ENSUMAG00000007901	TRMT13	97	68.171	ENSMGAG00000006970	TRMT13	99	68.171	Meleagris_gallopavo
ENSUMAG00000007901	TRMT13	99	85.383	ENSMAUG00000010448	Trmt13	99	83.750	Mesocricetus_auratus
ENSUMAG00000007901	TRMT13	100	92.100	ENSMICG00000005283	TRMT13	100	92.661	Microcebus_murinus
ENSUMAG00000007901	TRMT13	99	83.295	ENSMOCG00000019914	Trmt13	99	82.708	Microtus_ochrogaster
ENSUMAG00000007901	TRMT13	54	52.075	ENSMMOG00000007762	trmt13	89	52.075	Mola_mola
ENSUMAG00000007901	TRMT13	99	77.367	ENSMODG00000003646	TRMT13	99	75.620	Monodelphis_domestica
ENSUMAG00000007901	TRMT13	99	50.701	ENSMALG00000020965	trmt13	97	50.972	Monopterus_albus
ENSUMAG00000007901	TRMT13	99	85.082	MGP_CAROLIEiJ_G0025568	Trmt13	94	91.071	Mus_caroli
ENSUMAG00000007901	TRMT13	99	85.548	ENSMUSG00000033439	Trmt13	94	91.071	Mus_musculus
ENSUMAG00000007901	TRMT13	99	86.014	MGP_PahariEiJ_G0027014	Trmt13	93	91.566	Mus_pahari
ENSUMAG00000007901	TRMT13	99	85.781	MGP_SPRETEiJ_G0026518	Trmt13	94	91.071	Mus_spretus
ENSUMAG00000007901	TRMT13	88	91.076	ENSMPUG00000002078	-	100	91.076	Mustela_putorius_furo
ENSUMAG00000007901	TRMT13	100	79.834	ENSMLUG00000002124	TRMT13	100	79.834	Myotis_lucifugus
ENSUMAG00000007901	TRMT13	98	49.884	ENSNBRG00000006783	trmt13	95	50.000	Neolamprologus_brichardi
ENSUMAG00000007901	TRMT13	100	89.813	ENSNLEG00000035917	TRMT13	100	89.908	Nomascus_leucogenys
ENSUMAG00000007901	TRMT13	51	72.984	ENSMEUG00000013346	-	100	72.984	Notamacropus_eugenii
ENSUMAG00000007901	TRMT13	67	89.338	ENSOPRG00000012048	TRMT13	67	89.338	Ochotona_princeps
ENSUMAG00000007901	TRMT13	99	54.670	ENSONIG00000004574	trmt13	99	54.237	Oreochromis_niloticus
ENSUMAG00000007901	TRMT13	99	74.419	ENSOANG00000012057	TRMT13	99	74.419	Ornithorhynchus_anatinus
ENSUMAG00000007901	TRMT13	100	89.605	ENSOCUG00000023095	TRMT13	100	89.605	Oryctolagus_cuniculus
ENSUMAG00000007901	TRMT13	96	50.212	ENSORLG00000003320	trmt13	99	50.847	Oryzias_latipes
ENSUMAG00000007901	TRMT13	95	48.922	ENSORLG00020005972	trmt13	97	50.524	Oryzias_latipes_hni
ENSUMAG00000007901	TRMT13	99	53.333	ENSORLG00015002270	trmt13	99	53.715	Oryzias_latipes_hsok
ENSUMAG00000007901	TRMT13	99	51.843	ENSOMEG00000006724	trmt13	94	53.404	Oryzias_melastigma
ENSUMAG00000007901	TRMT13	98	91.509	ENSOGAG00000005618	TRMT13	97	90.852	Otolemur_garnettii
ENSUMAG00000007901	TRMT13	99	92.130	ENSOARG00000017983	TRMT13	100	91.060	Ovis_aries
ENSUMAG00000007901	TRMT13	100	89.813	ENSPPAG00000043736	TRMT13	100	89.813	Pan_paniscus
ENSUMAG00000007901	TRMT13	100	93.763	ENSPPRG00000003424	TRMT13	100	96.330	Panthera_pardus
ENSUMAG00000007901	TRMT13	100	93.763	ENSPTIG00000018598	TRMT13	100	96.330	Panthera_tigris_altaica
ENSUMAG00000007901	TRMT13	100	89.813	ENSPTRG00000001001	TRMT13	100	89.813	Pan_troglodytes
ENSUMAG00000007901	TRMT13	100	90.437	ENSPANG00000007598	TRMT13	100	91.743	Papio_anubis
ENSUMAG00000007901	TRMT13	98	55.792	ENSPKIG00000001514	trmt13	98	55.870	Paramormyrops_kingsleyae
ENSUMAG00000007901	TRMT13	92	70.927	ENSPSIG00000012703	TRMT13	99	70.743	Pelodiscus_sinensis
ENSUMAG00000007901	TRMT13	99	51.620	ENSPMGG00000013298	trmt13	94	52.146	Periophthalmus_magnuspinnatus
ENSUMAG00000007901	TRMT13	99	83.527	ENSPEMG00000000275	Trmt13	99	83.125	Peromyscus_maniculatus_bairdii
ENSUMAG00000007901	TRMT13	97	45.372	ENSPMAG00000000823	trmt13	100	44.578	Petromyzon_marinus
ENSUMAG00000007901	TRMT13	99	77.674	ENSPCIG00000007699	TRMT13	99	76.507	Phascolarctos_cinereus
ENSUMAG00000007901	TRMT13	100	48.966	ENSPFOG00000008675	trmt13	98	48.945	Poecilia_formosa
ENSUMAG00000007901	TRMT13	98	48.513	ENSPLAG00000009709	trmt13	99	48.723	Poecilia_latipinna
ENSUMAG00000007901	TRMT13	97	47.586	ENSPMEG00000022954	trmt13	99	47.863	Poecilia_mexicana
ENSUMAG00000007901	TRMT13	75	51.917	ENSPREG00000005645	trmt13	91	50.000	Poecilia_reticulata
ENSUMAG00000007901	TRMT13	100	89.605	ENSPPYG00000001120	TRMT13	100	89.605	Pongo_abelii
ENSUMAG00000007901	TRMT13	99	88.889	ENSPCAG00000002340	TRMT13	100	87.526	Procavia_capensis
ENSUMAG00000007901	TRMT13	100	91.684	ENSPCOG00000017984	TRMT13	100	93.578	Propithecus_coquereli
ENSUMAG00000007901	TRMT13	100	91.476	ENSPVAG00000017430	TRMT13	100	91.476	Pteropus_vampyrus
ENSUMAG00000007901	TRMT13	99	52.403	ENSPNYG00000013690	trmt13	99	52.340	Pundamilia_nyererei
ENSUMAG00000007901	TRMT13	97	54.673	ENSPNAG00000022130	trmt13	97	55.388	Pygocentrus_nattereri
ENSUMAG00000007901	TRMT13	99	85.548	ENSRNOG00000015140	Trmt13	96	84.310	Rattus_norvegicus
ENSUMAG00000007901	TRMT13	100	90.644	ENSRBIG00000037686	TRMT13	100	91.743	Rhinopithecus_bieti
ENSUMAG00000007901	TRMT13	100	90.644	ENSRROG00000044057	TRMT13	100	91.743	Rhinopithecus_roxellana
ENSUMAG00000007901	TRMT13	100	90.021	ENSSBOG00000026541	TRMT13	100	91.743	Saimiri_boliviensis_boliviensis
ENSUMAG00000007901	TRMT13	99	78.009	ENSSHAG00000005213	TRMT13	97	77.346	Sarcophilus_harrisii
ENSUMAG00000007901	TRMT13	99	54.312	ENSSFOG00015017560	trmt13	98	54.194	Scleropages_formosus
ENSUMAG00000007901	TRMT13	99	50.685	ENSSMAG00000014592	trmt13	97	51.368	Scophthalmus_maximus
ENSUMAG00000007901	TRMT13	98	50.794	ENSSDUG00000015508	trmt13	97	50.725	Seriola_dumerili
ENSUMAG00000007901	TRMT13	98	51.131	ENSSLDG00000019060	trmt13	96	51.368	Seriola_lalandi_dorsalis
ENSUMAG00000007901	TRMT13	99	77.156	ENSSARG00000010344	TRMT13	99	76.778	Sorex_araneus
ENSUMAG00000007901	TRMT13	99	68.056	ENSSPUG00000016339	TRMT13	100	68.035	Sphenodon_punctatus
ENSUMAG00000007901	TRMT13	98	52.765	ENSSPAG00000011922	trmt13	99	52.772	Stegastes_partitus
ENSUMAG00000007901	TRMT13	100	92.931	ENSSSCG00000006869	TRMT13	100	92.931	Sus_scrofa
ENSUMAG00000007901	TRMT13	99	67.824	ENSTGUG00000005253	TRMT13	100	67.308	Taeniopygia_guttata
ENSUMAG00000007901	TRMT13	97	50.580	ENSTRUG00000008400	trmt13	99	50.313	Takifugu_rubripes
ENSUMAG00000007901	TRMT13	96	74.519	ENSTBEG00000008911	TRMT13	100	74.519	Tupaia_belangeri
ENSUMAG00000007901	TRMT13	51	97.333	ENSTTRG00000015302	-	60	97.333	Tursiops_truncatus
ENSUMAG00000007901	TRMT13	100	93.971	ENSUAMG00000017251	TRMT13	100	93.971	Ursus_americanus
ENSUMAG00000007901	TRMT13	99	75.231	ENSVPAG00000001034	TRMT13	100	75.231	Vicugna_pacos
ENSUMAG00000007901	TRMT13	99	94.432	ENSVVUG00000021996	TRMT13	99	93.971	Vulpes_vulpes
ENSUMAG00000007901	TRMT13	97	57.377	ENSXETG00000013204	trmt13	97	57.388	Xenopus_tropicalis
ENSUMAG00000007901	TRMT13	98	47.826	ENSXMAG00000010765	trmt13	99	48.085	Xiphophorus_maculatus