EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000008274 (Gene tree)
Gene ID: 103668848
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 51670 bases
Position: chrKK498630.1:168714-220383
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000011277	Ago_hook	PF10427.9	2.9e-19	1	1
ENSUMAP00000011315	Ago_hook	PF10427.9	3e-19	1	1
ENSUMAP00000011309	Ago_hook	PF10427.9	3.6e-19	1	1
ENSUMAP00000011281	Ago_hook	PF10427.9	1.4e-18	1	1
ENSUMAP00000011332	Ago_hook	PF10427.9	2.4e-18	1	1
ENSUMAP00000011288	Ago_hook	PF10427.9	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000013439	TNRC6A-203	6089	-	ENSUMAP00000011288	1600 (aa)	-	-
ENSUMAT00000013432	TNRC6A-202	6233	-	ENSUMAP00000011281	1648 (aa)	-	-
ENSUMAT00000013492	TNRC6A-206	5217	-	ENSUMAP00000011332	1738 (aa)	-	-
ENSUMAT00000013472	TNRC6A-205	5748	-	ENSUMAP00000011315	1915 (aa)	-	-
ENSUMAT00000013428	TNRC6A-201	6266	-	ENSUMAP00000011277	1659 (aa)	-	-
ENSUMAT00000013463	TNRC6A-204	5733	-	ENSUMAP00000011309	1910 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000008274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000008274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000008274	TNRC6A	99	42.757	ENSUMAG00000013614	TNRC6C	99	42.405
ENSUMAG00000008274	TNRC6A	97	37.375	ENSUMAG00000014336	TNRC6B	100	36.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000008274	TNRC6A	100	97.349	ENSG00000090905	TNRC6A	99	98.564	Homo_sapiens
ENSUMAG00000008274	TNRC6A	99	99.003	ENSAMEG00000009333	TNRC6A	99	99.003	Ailuropoda_melanoleuca
ENSUMAG00000008274	TNRC6A	100	83.012	ENSAPLG00000009978	TNRC6A	100	82.267	Anas_platyrhynchos
ENSUMAG00000008274	TNRC6A	99	54.699	ENSACAG00000011857	TNRC6A	94	57.292	Anolis_carolinensis
ENSUMAG00000008274	TNRC6A	100	97.169	ENSANAG00000025252	TNRC6A	99	95.206	Aotus_nancymaae
ENSUMAG00000008274	TNRC6A	100	60.851	ENSAMXG00000019919	tnrc6a	99	58.065	Astyanax_mexicanus
ENSUMAG00000008274	TNRC6A	100	96.986	ENSBTAG00000017999	TNRC6A	100	95.156	Bos_taurus
ENSUMAG00000008274	TNRC6A	100	97.289	ENSCJAG00000020677	TNRC6A	98	94.935	Callithrix_jacchus
ENSUMAG00000008274	TNRC6A	100	99.156	ENSCAFG00000017531	TNRC6A	98	97.455	Canis_familiaris
ENSUMAG00000008274	TNRC6A	100	97.890	ENSCAFG00020021160	TNRC6A	99	97.269	Canis_lupus_dingo
ENSUMAG00000008274	TNRC6A	100	96.504	ENSCHIG00000019448	TNRC6A	99	92.267	Capra_hircus
ENSUMAG00000008274	TNRC6A	100	97.229	ENSTSYG00000012711	TNRC6A	100	95.132	Carlito_syrichta
ENSUMAG00000008274	TNRC6A	100	96.747	ENSCPOG00000036684	TNRC6A	98	92.167	Cavia_porcellus
ENSUMAG00000008274	TNRC6A	100	97.349	ENSCCAG00000033664	TNRC6A	99	96.115	Cebus_capucinus
ENSUMAG00000008274	TNRC6A	100	97.530	ENSCATG00000019284	TNRC6A	100	91.430	Cercocebus_atys
ENSUMAG00000008274	TNRC6A	99	92.597	ENSCLAG00000010217	TNRC6A	99	87.461	Chinchilla_lanigera
ENSUMAG00000008274	TNRC6A	99	96.275	ENSCSAG00000006561	TNRC6A	98	95.381	Chlorocebus_sabaeus
ENSUMAG00000008274	TNRC6A	95	91.892	ENSCHOG00000009374	TNRC6A	92	91.967	Choloepus_hoffmanni
ENSUMAG00000008274	TNRC6A	100	83.514	ENSCPBG00000001881	TNRC6A	99	80.067	Chrysemys_picta_bellii
ENSUMAG00000008274	TNRC6A	100	97.590	ENSCANG00000041549	TNRC6A	98	95.532	Colobus_angolensis_palliatus
ENSUMAG00000008274	TNRC6A	99	95.512	ENSCGRG00001015021	Tnrc6a	99	94.105	Cricetulus_griseus_chok1gshd
ENSUMAG00000008274	TNRC6A	99	94.724	ENSCGRG00000013351	Tnrc6a	99	89.673	Cricetulus_griseus_crigri
ENSUMAG00000008274	TNRC6A	100	58.172	ENSDARG00000079688	tnrc6a	99	56.832	Danio_rerio
ENSUMAG00000008274	TNRC6A	100	92.898	ENSDNOG00000013989	TNRC6A	99	93.836	Dasypus_novemcinctus
ENSUMAG00000008274	TNRC6A	99	86.759	ENSETEG00000014658	TNRC6A	99	85.609	Echinops_telfairi
ENSUMAG00000008274	TNRC6A	100	97.590	ENSEASG00005017693	TNRC6A	99	96.684	Equus_asinus_asinus
ENSUMAG00000008274	TNRC6A	100	97.590	ENSECAG00000025056	TNRC6A	99	96.737	Equus_caballus
ENSUMAG00000008274	TNRC6A	100	89.009	ENSEEUG00000004530	TNRC6A	99	89.256	Erinaceus_europaeus
ENSUMAG00000008274	TNRC6A	100	97.227	ENSFCAG00000025236	TNRC6A	99	96.632	Felis_catus
ENSUMAG00000008274	TNRC6A	100	82.202	ENSFALG00000003757	TNRC6A	98	79.547	Ficedula_albicollis
ENSUMAG00000008274	TNRC6A	100	84.087	ENSGALG00000006068	TNRC6A	99	80.998	Gallus_gallus
ENSUMAG00000008274	TNRC6A	100	82.742	ENSGAGG00000023209	TNRC6A	99	79.698	Gopherus_agassizii
ENSUMAG00000008274	TNRC6A	100	97.410	ENSGGOG00000005137	TNRC6A	99	96.134	Gorilla_gorilla
ENSUMAG00000008274	TNRC6A	99	95.085	ENSHGLG00000012474	-	99	90.402	Heterocephalus_glaber_female
ENSUMAG00000008274	TNRC6A	99	74.442	ENSHGLG00000007368	-	93	72.440	Heterocephalus_glaber_female
ENSUMAG00000008274	TNRC6A	99	95.012	ENSHGLG00100012496	-	98	90.299	Heterocephalus_glaber_male
ENSUMAG00000008274	TNRC6A	100	95.473	ENSSTOG00000023394	TNRC6A	96	95.502	Ictidomys_tridecemlineatus
ENSUMAG00000008274	TNRC6A	100	70.605	ENSLACG00000006277	TNRC6A	100	70.665	Latimeria_chalumnae
ENSUMAG00000008274	TNRC6A	100	83.223	ENSLOCG00000005517	tnrc6a	90	83.223	Lepisosteus_oculatus
ENSUMAG00000008274	TNRC6A	100	96.386	ENSLAFG00000004209	TNRC6A	99	92.555	Loxodonta_africana
ENSUMAG00000008274	TNRC6A	100	94.393	ENSMFAG00000003824	TNRC6A	100	94.239	Macaca_fascicularis
ENSUMAG00000008274	TNRC6A	100	97.470	ENSMMUG00000020428	TNRC6A	99	95.440	Macaca_mulatta
ENSUMAG00000008274	TNRC6A	100	97.410	ENSMNEG00000034854	TNRC6A	100	94.287	Macaca_nemestrina
ENSUMAG00000008274	TNRC6A	99	94.325	ENSMLEG00000042737	TNRC6A	98	93.158	Mandrillus_leucophaeus
ENSUMAG00000008274	TNRC6A	100	82.429	ENSMGAG00000006455	TNRC6A	94	82.883	Meleagris_gallopavo
ENSUMAG00000008274	TNRC6A	99	95.573	ENSMAUG00000012750	Tnrc6a	99	90.375	Mesocricetus_auratus
ENSUMAG00000008274	TNRC6A	100	97.892	ENSMICG00000030685	TNRC6A	99	95.938	Microcebus_murinus
ENSUMAG00000008274	TNRC6A	99	96.056	ENSMOCG00000000152	Tnrc6a	99	90.938	Microtus_ochrogaster
ENSUMAG00000008274	TNRC6A	100	84.056	ENSMODG00000016348	TNRC6A	97	82.110	Monodelphis_domestica
ENSUMAG00000008274	TNRC6A	100	94.759	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.782	Mus_caroli
ENSUMAG00000008274	TNRC6A	100	95.060	ENSMUSG00000052707	Tnrc6a	99	95.068	Mus_musculus
ENSUMAG00000008274	TNRC6A	100	95.063	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.211	Mus_pahari
ENSUMAG00000008274	TNRC6A	100	92.882	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.925	Mus_spretus
ENSUMAG00000008274	TNRC6A	99	89.079	ENSMPUG00000012324	TNRC6A	100	83.983	Mustela_putorius_furo
ENSUMAG00000008274	TNRC6A	99	93.879	ENSMLUG00000002701	TNRC6A	100	93.826	Myotis_lucifugus
ENSUMAG00000008274	TNRC6A	100	96.448	ENSNGAG00000020702	Tnrc6a	99	91.528	Nannospalax_galili
ENSUMAG00000008274	TNRC6A	100	95.911	ENSNLEG00000011851	TNRC6A	99	93.191	Nomascus_leucogenys
ENSUMAG00000008274	TNRC6A	76	89.590	ENSMEUG00000015959	-	74	89.590	Notamacropus_eugenii
ENSUMAG00000008274	TNRC6A	95	99.627	ENSOPRG00000005819	TNRC6A	94	99.627	Ochotona_princeps
ENSUMAG00000008274	TNRC6A	99	91.391	ENSODEG00000012802	TNRC6A	99	87.297	Octodon_degus
ENSUMAG00000008274	TNRC6A	100	81.516	ENSOANG00000007672	TNRC6A	99	83.606	Ornithorhynchus_anatinus
ENSUMAG00000008274	TNRC6A	100	92.999	ENSOCUG00000004325	TNRC6A	100	93.245	Oryctolagus_cuniculus
ENSUMAG00000008274	TNRC6A	99	96.476	ENSOGAG00000006666	TNRC6A	98	96.476	Otolemur_garnettii
ENSUMAG00000008274	TNRC6A	100	96.926	ENSOARG00000017950	TNRC6A	98	95.029	Ovis_aries
ENSUMAG00000008274	TNRC6A	100	97.289	ENSPPAG00000028379	TNRC6A	99	95.725	Pan_paniscus
ENSUMAG00000008274	TNRC6A	100	97.227	ENSPPRG00000005861	TNRC6A	98	95.731	Panthera_pardus
ENSUMAG00000008274	TNRC6A	100	97.167	ENSPTIG00000006346	TNRC6A	97	95.300	Panthera_tigris_altaica
ENSUMAG00000008274	TNRC6A	100	95.387	ENSPTRG00000007898	TNRC6A	99	95.831	Pan_troglodytes
ENSUMAG00000008274	TNRC6A	100	95.906	ENSPANG00000018523	TNRC6A	99	92.347	Papio_anubis
ENSUMAG00000008274	TNRC6A	96	75.862	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSUMAG00000008274	TNRC6A	88	78.897	ENSPSIG00000003965	TNRC6A	100	78.897	Pelodiscus_sinensis
ENSUMAG00000008274	TNRC6A	99	95.449	ENSPEMG00000016318	Tnrc6a	99	90.578	Peromyscus_maniculatus_bairdii
ENSUMAG00000008274	TNRC6A	100	86.933	ENSPCIG00000012106	TNRC6A	99	84.308	Phascolarctos_cinereus
ENSUMAG00000008274	TNRC6A	100	94.875	ENSPPYG00000007202	TNRC6A	99	94.060	Pongo_abelii
ENSUMAG00000008274	TNRC6A	94	100.000	ENSPCAG00000008260	TNRC6A	93	100.000	Procavia_capensis
ENSUMAG00000008274	TNRC6A	100	95.361	ENSPCOG00000010134	TNRC6A	99	92.809	Propithecus_coquereli
ENSUMAG00000008274	TNRC6A	88	72.492	ENSPVAG00000012066	TNRC6A	99	71.103	Pteropus_vampyrus
ENSUMAG00000008274	TNRC6A	100	94.762	ENSRNOG00000024737	Tnrc6a	99	91.649	Rattus_norvegicus
ENSUMAG00000008274	TNRC6A	100	97.590	ENSRBIG00000014222	TNRC6A	99	96.429	Rhinopithecus_bieti
ENSUMAG00000008274	TNRC6A	100	95.906	ENSRROG00000032360	TNRC6A	99	95.119	Rhinopithecus_roxellana
ENSUMAG00000008274	TNRC6A	99	96.304	ENSSBOG00000036197	TNRC6A	100	97.484	Saimiri_boliviensis_boliviensis
ENSUMAG00000008274	TNRC6A	100	85.468	ENSSHAG00000008811	TNRC6A	99	83.543	Sarcophilus_harrisii
ENSUMAG00000008274	TNRC6A	93	67.665	ENSSFOG00015008920	tnrc6a	99	67.669	Scleropages_formosus
ENSUMAG00000008274	TNRC6A	73	83.877	ENSSARG00000002479	TNRC6A	90	84.239	Sorex_araneus
ENSUMAG00000008274	TNRC6A	100	79.521	ENSSPUG00000010525	TNRC6A	100	78.835	Sphenodon_punctatus
ENSUMAG00000008274	TNRC6A	100	98.312	ENSSSCG00000038870	TNRC6A	100	98.312	Sus_scrofa
ENSUMAG00000008274	TNRC6A	100	83.034	ENSTGUG00000006142	TNRC6A	98	78.130	Taeniopygia_guttata
ENSUMAG00000008274	TNRC6A	99	93.711	ENSTBEG00000014965	TNRC6A	99	93.711	Tupaia_belangeri
ENSUMAG00000008274	TNRC6A	93	98.058	ENSTTRG00000002008	TNRC6A	90	98.058	Tursiops_truncatus
ENSUMAG00000008274	TNRC6A	79	100.000	ENSUAMG00000006656	-	94	95.652	Ursus_americanus
ENSUMAG00000008274	TNRC6A	56	85.604	ENSVPAG00000010764	-	56	85.604	Vicugna_pacos
ENSUMAG00000008274	TNRC6A	100	99.036	ENSVVUG00000005380	TNRC6A	99	98.267	Vulpes_vulpes
ENSUMAG00000008274	TNRC6A	99	66.085	ENSXETG00000030437	TNRC6A	99	66.344	Xenopus_tropicalis