EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000008280 (Gene tree)
Gene ID: 103658564
Gene Symbol: POLR2D
Alias: RBP4
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 9747 bases
Position: chrKK498550.1:1326092-1335838
Accession: 9191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000010992	RNA_pol_Rpb4	PF03874.16	4.6e-25	1	1
ENSUMAP00000010994	RNA_pol_Rpb4	PF03874.16	5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000013092	POLR2D-202	776	-	ENSUMAP00000010994	104 (aa)	-	UPI00000222CC
ENSUMAT00000013090	POLR2D-201	402	-	ENSUMAP00000010992	133 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000008280's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03020	RNA polymerase	KEGG
umr05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000008280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000008280	POLR2D	100	100.000	ENSG00000144231	POLR2D	100	100.000	Homo_sapiens
ENSUMAG00000008280	POLR2D	100	95.192	ENSAPOG00000023553	polr2d	83	94.167	Acanthochromis_polyacanthus
ENSUMAG00000008280	POLR2D	100	100.000	ENSAMEG00000011746	POLR2D	98	87.943	Ailuropoda_melanoleuca
ENSUMAG00000008280	POLR2D	100	95.192	ENSAOCG00000007295	polr2d	83	94.167	Amphiprion_ocellaris
ENSUMAG00000008280	POLR2D	100	95.192	ENSAPEG00000018714	polr2d	83	94.167	Amphiprion_percula
ENSUMAG00000008280	POLR2D	100	95.192	ENSATEG00000020416	polr2d	97	83.688	Anabas_testudineus
ENSUMAG00000008280	POLR2D	100	99.038	ENSACAG00000005255	POLR2D	85	98.333	Anolis_carolinensis
ENSUMAG00000008280	POLR2D	100	100.000	ENSANAG00000019959	POLR2D	98	89.209	Aotus_nancymaae
ENSUMAG00000008280	POLR2D	100	95.192	ENSACLG00000009919	polr2d	57	94.167	Astatotilapia_calliptera
ENSUMAG00000008280	POLR2D	100	97.115	ENSAMXG00000008954	polr2d	84	95.000	Astyanax_mexicanus
ENSUMAG00000008280	POLR2D	100	100.000	ENSBTAG00000053244	POLR2D	98	89.209	Bos_taurus
ENSUMAG00000008280	POLR2D	99	61.165	WBGene00018391	rpb-4	79	59.649	Caenorhabditis_elegans
ENSUMAG00000008280	POLR2D	100	100.000	ENSCJAG00000042216	-	98	89.209	Callithrix_jacchus
ENSUMAG00000008280	POLR2D	100	99.038	ENSCJAG00000021814	-	98	88.489	Callithrix_jacchus
ENSUMAG00000008280	POLR2D	100	100.000	ENSCAFG00000004311	POLR2D	98	89.209	Canis_familiaris
ENSUMAG00000008280	POLR2D	100	100.000	ENSCAFG00020003617	POLR2D	98	89.209	Canis_lupus_dingo
ENSUMAG00000008280	POLR2D	100	100.000	ENSCHIG00000025995	POLR2D	98	88.489	Capra_hircus
ENSUMAG00000008280	POLR2D	100	99.038	ENSTSYG00000036021	POLR2D	100	99.145	Carlito_syrichta
ENSUMAG00000008280	POLR2D	100	99.038	ENSCPOG00000002571	POLR2D	98	87.770	Cavia_porcellus
ENSUMAG00000008280	POLR2D	100	100.000	ENSCCAG00000037709	POLR2D	98	89.209	Cebus_capucinus
ENSUMAG00000008280	POLR2D	100	100.000	ENSCATG00000036749	POLR2D	98	88.489	Cercocebus_atys
ENSUMAG00000008280	POLR2D	100	99.038	ENSCLAG00000004449	POLR2D	98	88.489	Chinchilla_lanigera
ENSUMAG00000008280	POLR2D	100	100.000	ENSCSAG00000016861	POLR2D	98	88.489	Chlorocebus_sabaeus
ENSUMAG00000008280	POLR2D	100	100.000	ENSCHOG00000013850	POLR2D	100	100.000	Choloepus_hoffmanni
ENSUMAG00000008280	POLR2D	99	87.379	ENSCING00000011474	-	88	87.179	Ciona_intestinalis
ENSUMAG00000008280	POLR2D	99	87.379	ENSCSAVG00000008353	-	80	87.931	Ciona_savignyi
ENSUMAG00000008280	POLR2D	100	100.000	ENSCANG00000043665	POLR2D	98	89.209	Colobus_angolensis_palliatus
ENSUMAG00000008280	POLR2D	100	100.000	ENSCGRG00001013608	Polr2d	98	89.209	Cricetulus_griseus_chok1gshd
ENSUMAG00000008280	POLR2D	100	100.000	ENSCGRG00000012624	Polr2d	100	100.000	Cricetulus_griseus_crigri
ENSUMAG00000008280	POLR2D	100	95.192	ENSCSEG00000006147	polr2d	83	94.167	Cynoglossus_semilaevis
ENSUMAG00000008280	POLR2D	100	94.231	ENSCVAG00000000779	polr2d	83	93.333	Cyprinodon_variegatus
ENSUMAG00000008280	POLR2D	100	97.115	ENSDARG00000076509	polr2d	85	95.833	Danio_rerio
ENSUMAG00000008280	POLR2D	100	100.000	ENSDNOG00000008527	POLR2D	98	87.770	Dasypus_novemcinctus
ENSUMAG00000008280	POLR2D	100	100.000	ENSDORG00000026897	Polr2d	98	88.489	Dipodomys_ordii
ENSUMAG00000008280	POLR2D	100	77.885	FBgn0263757	Rpb4	86	78.333	Drosophila_melanogaster
ENSUMAG00000008280	POLR2D	100	97.115	ENSEBUG00000007675	polr2d	85	95.000	Eptatretus_burgeri
ENSUMAG00000008280	POLR2D	100	100.000	ENSEASG00005007103	POLR2D	98	89.209	Equus_asinus_asinus
ENSUMAG00000008280	POLR2D	100	100.000	ENSECAG00000000556	POLR2D	98	89.209	Equus_caballus
ENSUMAG00000008280	POLR2D	100	96.154	ENSELUG00000005928	polr2d	84	95.000	Esox_lucius
ENSUMAG00000008280	POLR2D	100	100.000	ENSFCAG00000027816	POLR2D	98	89.209	Felis_catus
ENSUMAG00000008280	POLR2D	100	99.038	ENSFALG00000003528	POLR2D	98	88.489	Ficedula_albicollis
ENSUMAG00000008280	POLR2D	100	99.038	ENSFDAG00000007217	POLR2D	98	88.489	Fukomys_damarensis
ENSUMAG00000008280	POLR2D	100	97.115	ENSGMOG00000001823	polr2d	83	96.667	Gadus_morhua
ENSUMAG00000008280	POLR2D	100	99.038	ENSGALG00000002057	POLR2D	98	88.489	Gallus_gallus
ENSUMAG00000008280	POLR2D	100	95.192	ENSGAFG00000016932	polr2d	59	94.167	Gambusia_affinis
ENSUMAG00000008280	POLR2D	100	94.231	ENSGACG00000004639	polr2d	83	92.500	Gasterosteus_aculeatus
ENSUMAG00000008280	POLR2D	100	99.038	ENSGAGG00000021308	POLR2D	85	98.333	Gopherus_agassizii
ENSUMAG00000008280	POLR2D	100	100.000	ENSGGOG00000004723	POLR2D	98	89.209	Gorilla_gorilla
ENSUMAG00000008280	POLR2D	100	99.038	ENSHGLG00000016570	Polr2d	98	88.489	Heterocephalus_glaber_female
ENSUMAG00000008280	POLR2D	100	99.038	ENSHGLG00100013785	Polr2d	98	88.489	Heterocephalus_glaber_male
ENSUMAG00000008280	POLR2D	100	93.269	ENSHCOG00000006425	polr2d	100	79.577	Hippocampus_comes
ENSUMAG00000008280	POLR2D	100	97.115	ENSIPUG00000011192	polr2d	85	95.833	Ictalurus_punctatus
ENSUMAG00000008280	POLR2D	100	97.115	ENSSTOG00000023329	POLR2D	98	87.050	Ictidomys_tridecemlineatus
ENSUMAG00000008280	POLR2D	100	93.269	ENSJJAG00000005723	-	94	94.017	Jaculus_jaculus
ENSUMAG00000008280	POLR2D	100	92.308	ENSJJAG00000000783	-	85	91.667	Jaculus_jaculus
ENSUMAG00000008280	POLR2D	100	100.000	ENSJJAG00000015053	-	98	88.489	Jaculus_jaculus
ENSUMAG00000008280	POLR2D	99	94.175	ENSKMAG00000010677	polr2d	66	94.017	Kryptolebias_marmoratus
ENSUMAG00000008280	POLR2D	100	98.077	ENSLACG00000017253	POLR2D	85	96.667	Latimeria_chalumnae
ENSUMAG00000008280	POLR2D	100	96.154	ENSLOCG00000009106	polr2d	83	95.000	Lepisosteus_oculatus
ENSUMAG00000008280	POLR2D	100	100.000	ENSLAFG00000001848	POLR2D	98	88.489	Loxodonta_africana
ENSUMAG00000008280	POLR2D	100	100.000	ENSMFAG00000031937	POLR2D	98	88.489	Macaca_fascicularis
ENSUMAG00000008280	POLR2D	100	100.000	ENSMMUG00000001989	POLR2D	98	88.489	Macaca_mulatta
ENSUMAG00000008280	POLR2D	100	100.000	ENSMNEG00000035505	POLR2D	98	88.489	Macaca_nemestrina
ENSUMAG00000008280	POLR2D	100	100.000	ENSMLEG00000035827	POLR2D	98	88.489	Mandrillus_leucophaeus
ENSUMAG00000008280	POLR2D	100	99.038	ENSMGAG00000001248	POLR2D	98	88.489	Meleagris_gallopavo
ENSUMAG00000008280	POLR2D	100	99.038	ENSMAUG00000014518	Polr2d	98	88.489	Mesocricetus_auratus
ENSUMAG00000008280	POLR2D	100	99.038	ENSMICG00000009931	POLR2D	98	88.489	Microcebus_murinus
ENSUMAG00000008280	POLR2D	100	96.154	ENSMOCG00000019367	Polr2d	97	86.957	Microtus_ochrogaster
ENSUMAG00000008280	POLR2D	100	81.731	ENSMODG00000025027	-	83	82.203	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	81.731	ENSMODG00000025028	-	83	82.203	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	80.769	ENSMODG00000025029	-	83	81.356	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	81.731	ENSMODG00000025026	-	83	82.203	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	99.038	ENSMODG00000018653	-	98	88.489	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	80.769	ENSMODG00000025035	-	82	82.051	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	81.731	ENSMODG00000025034	-	82	82.906	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	80.769	ENSMODG00000025036	-	82	82.051	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	80.769	ENSMODG00000025031	-	82	82.051	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	81.731	ENSMODG00000025030	-	83	82.203	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	80.769	ENSMODG00000025033	-	82	82.051	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	80.769	ENSMODG00000025032	-	82	82.051	Monodelphis_domestica
ENSUMAG00000008280	POLR2D	100	95.192	ENSMALG00000018266	polr2d	83	94.167	Monopterus_albus
ENSUMAG00000008280	POLR2D	100	100.000	MGP_CAROLIEiJ_G0022066	Polr2d	98	89.209	Mus_caroli
ENSUMAG00000008280	POLR2D	100	100.000	ENSMUSG00000024258	Polr2d	98	89.209	Mus_musculus
ENSUMAG00000008280	POLR2D	100	100.000	MGP_PahariEiJ_G0018800	Polr2d	98	89.209	Mus_pahari
ENSUMAG00000008280	POLR2D	100	100.000	MGP_SPRETEiJ_G0022977	Polr2d	98	89.209	Mus_spretus
ENSUMAG00000008280	POLR2D	100	100.000	ENSMPUG00000016685	POLR2D	98	89.209	Mustela_putorius_furo
ENSUMAG00000008280	POLR2D	100	100.000	ENSMLUG00000006862	POLR2D	99	100.000	Myotis_lucifugus
ENSUMAG00000008280	POLR2D	100	100.000	ENSNGAG00000014862	Polr2d	98	89.209	Nannospalax_galili
ENSUMAG00000008280	POLR2D	100	100.000	ENSNLEG00000027191	POLR2D	98	89.209	Nomascus_leucogenys
ENSUMAG00000008280	POLR2D	100	99.038	ENSOPRG00000005327	POLR2D	100	99.145	Ochotona_princeps
ENSUMAG00000008280	POLR2D	100	99.038	ENSODEG00000005262	POLR2D	98	88.489	Octodon_degus
ENSUMAG00000008280	POLR2D	100	95.192	ENSONIG00000017290	polr2d	83	94.167	Oreochromis_niloticus
ENSUMAG00000008280	POLR2D	100	99.038	ENSOANG00000013216	POLR2D	99	99.145	Ornithorhynchus_anatinus
ENSUMAG00000008280	POLR2D	100	90.476	ENSOCUG00000021449	-	98	81.429	Oryctolagus_cuniculus
ENSUMAG00000008280	POLR2D	100	99.038	ENSOCUG00000023403	-	100	85.915	Oryctolagus_cuniculus
ENSUMAG00000008280	POLR2D	100	94.231	ENSORLG00000005266	polr2d	83	92.500	Oryzias_latipes
ENSUMAG00000008280	POLR2D	100	94.231	ENSORLG00020006647	polr2d	83	92.500	Oryzias_latipes_hni
ENSUMAG00000008280	POLR2D	100	94.231	ENSORLG00015003222	polr2d	83	92.500	Oryzias_latipes_hsok
ENSUMAG00000008280	POLR2D	100	94.231	ENSOMEG00000018915	polr2d	83	92.500	Oryzias_melastigma
ENSUMAG00000008280	POLR2D	100	99.038	ENSOGAG00000017118	POLR2D	98	87.234	Otolemur_garnettii
ENSUMAG00000008280	POLR2D	100	100.000	ENSOARG00000015995	POLR2D	98	88.489	Ovis_aries
ENSUMAG00000008280	POLR2D	100	100.000	ENSPPRG00000020222	POLR2D	98	89.209	Panthera_pardus
ENSUMAG00000008280	POLR2D	100	100.000	ENSPTIG00000018618	POLR2D	98	89.209	Panthera_tigris_altaica
ENSUMAG00000008280	POLR2D	100	100.000	ENSPTRG00000012436	POLR2D	98	89.209	Pan_troglodytes
ENSUMAG00000008280	POLR2D	100	100.000	ENSPANG00000018602	POLR2D	98	88.489	Papio_anubis
ENSUMAG00000008280	POLR2D	100	97.115	ENSPKIG00000012166	polr2d	83	95.833	Paramormyrops_kingsleyae
ENSUMAG00000008280	POLR2D	100	99.038	ENSPSIG00000002873	POLR2D	99	99.145	Pelodiscus_sinensis
ENSUMAG00000008280	POLR2D	100	100.000	ENSPEMG00000018244	Polr2d	98	89.209	Peromyscus_maniculatus_bairdii
ENSUMAG00000008280	POLR2D	100	93.269	ENSPMAG00000005021	polr2d	82	92.308	Petromyzon_marinus
ENSUMAG00000008280	POLR2D	100	95.192	ENSPFOG00000008969	polr2d	83	94.167	Poecilia_formosa
ENSUMAG00000008280	POLR2D	100	95.192	ENSPLAG00000017210	polr2d	83	94.167	Poecilia_latipinna
ENSUMAG00000008280	POLR2D	100	95.192	ENSPMEG00000005160	polr2d	83	94.167	Poecilia_mexicana
ENSUMAG00000008280	POLR2D	100	95.192	ENSPREG00000021862	polr2d	100	95.192	Poecilia_reticulata
ENSUMAG00000008280	POLR2D	100	100.000	ENSPPYG00000012759	POLR2D	98	89.209	Pongo_abelii
ENSUMAG00000008280	POLR2D	100	100.000	ENSPCAG00000001396	POLR2D	85	99.167	Procavia_capensis
ENSUMAG00000008280	POLR2D	100	99.038	ENSPCOG00000022076	POLR2D	98	88.489	Propithecus_coquereli
ENSUMAG00000008280	POLR2D	100	100.000	ENSPVAG00000004002	POLR2D	85	99.167	Pteropus_vampyrus
ENSUMAG00000008280	POLR2D	100	97.115	ENSPNAG00000018246	polr2d	84	95.833	Pygocentrus_nattereri
ENSUMAG00000008280	POLR2D	100	100.000	ENSRNOG00000016231	Polr2d	98	89.209	Rattus_norvegicus
ENSUMAG00000008280	POLR2D	100	100.000	ENSRBIG00000039326	POLR2D	98	89.209	Rhinopithecus_bieti
ENSUMAG00000008280	POLR2D	100	100.000	ENSRROG00000023289	POLR2D	98	89.209	Rhinopithecus_roxellana
ENSUMAG00000008280	POLR2D	100	99.038	ENSSHAG00000014817	-	98	88.489	Sarcophilus_harrisii
ENSUMAG00000008280	POLR2D	100	97.115	ENSSFOG00015024204	polr2d	83	95.833	Scleropages_formosus
ENSUMAG00000008280	POLR2D	100	95.192	ENSSDUG00000006060	polr2d	83	94.167	Seriola_dumerili
ENSUMAG00000008280	POLR2D	100	95.192	ENSSLDG00000024485	polr2d	83	94.167	Seriola_lalandi_dorsalis
ENSUMAG00000008280	POLR2D	100	99.038	ENSSARG00000009037	POLR2D	100	99.145	Sorex_araneus
ENSUMAG00000008280	POLR2D	100	99.038	ENSSPUG00000014915	POLR2D	98	88.489	Sphenodon_punctatus
ENSUMAG00000008280	POLR2D	100	95.192	ENSSPAG00000013386	polr2d	83	94.167	Stegastes_partitus
ENSUMAG00000008280	POLR2D	100	100.000	ENSSSCG00000039230	POLR2D	98	89.209	Sus_scrofa
ENSUMAG00000008280	POLR2D	100	99.038	ENSTGUG00000005773	POLR2D	97	88.489	Taeniopygia_guttata
ENSUMAG00000008280	POLR2D	100	95.192	ENSTRUG00000004740	polr2d	85	94.167	Takifugu_rubripes
ENSUMAG00000008280	POLR2D	100	95.192	ENSTNIG00000011210	polr2d	85	94.167	Tetraodon_nigroviridis
ENSUMAG00000008280	POLR2D	100	100.000	ENSTBEG00000006081	POLR2D	100	100.000	Tupaia_belangeri
ENSUMAG00000008280	POLR2D	100	100.000	ENSTTRG00000010055	POLR2D	100	100.000	Tursiops_truncatus
ENSUMAG00000008280	POLR2D	100	100.000	ENSUAMG00000024374	POLR2D	91	99.167	Ursus_americanus
ENSUMAG00000008280	POLR2D	100	100.000	ENSVPAG00000007239	POLR2D	100	100.000	Vicugna_pacos
ENSUMAG00000008280	POLR2D	100	100.000	ENSVVUG00000008616	POLR2D	98	89.209	Vulpes_vulpes
ENSUMAG00000008280	POLR2D	100	95.192	ENSXETG00000002955	polr2d	85	94.167	Xenopus_tropicalis
ENSUMAG00000008280	POLR2D	100	95.192	ENSXCOG00000012668	polr2d	100	95.192	Xiphophorus_couchianus
ENSUMAG00000008280	POLR2D	100	95.192	ENSXMAG00000014031	polr2d	100	95.192	Xiphophorus_maculatus