EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000008979 (Gene tree)
Gene ID: 103665938
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 6806 bases
Position: chrKK498611.1:12968275-12975080
Accession: 103665938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000011990	tRNA_int_end_N2	PF12928.7	3.3e-12	1	1
ENSUMAP00000012000	tRNA_int_end_N2	PF12928.7	6.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000014264	TSEN54-201	1698	XM_008693972	ENSUMAP00000011990	444 (aa)	XP_008692194	-
ENSUMAT00000014272	TSEN54-202	1775	-	ENSUMAP00000012000	429 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000008979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000008979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000008979	TSEN54	100	81.798	ENSG00000182173	TSEN54	100	93.056	Homo_sapiens
ENSUMAG00000008979	TSEN54	99	43.792	ENSAPOG00000009659	tsen54	99	42.191	Acanthochromis_polyacanthus
ENSUMAG00000008979	TSEN54	100	98.649	ENSAMEG00000009414	TSEN54	84	98.649	Ailuropoda_melanoleuca
ENSUMAG00000008979	TSEN54	99	44.170	ENSAOCG00000000152	tsen54	81	43.172	Amphiprion_ocellaris
ENSUMAG00000008979	TSEN54	99	43.498	ENSAPEG00000018931	tsen54	81	42.511	Amphiprion_percula
ENSUMAG00000008979	TSEN54	99	42.697	ENSATEG00000019860	tsen54	84	40.397	Anabas_testudineus
ENSUMAG00000008979	TSEN54	100	50.783	ENSAPLG00000009419	TSEN54	97	50.000	Anas_platyrhynchos
ENSUMAG00000008979	TSEN54	99	48.780	ENSACAG00000006714	TSEN54	84	47.265	Anolis_carolinensis
ENSUMAG00000008979	TSEN54	100	83.146	ENSANAG00000024061	TSEN54	83	83.146	Aotus_nancymaae
ENSUMAG00000008979	TSEN54	99	43.018	ENSACLG00000019800	tsen54	83	43.237	Astatotilapia_calliptera
ENSUMAG00000008979	TSEN54	99	44.470	ENSAMXG00000006546	tsen54	83	44.470	Astyanax_mexicanus
ENSUMAG00000008979	TSEN54	100	84.944	ENSBTAG00000000824	TSEN54	84	84.944	Bos_taurus
ENSUMAG00000008979	TSEN54	100	81.798	ENSCJAG00000014278	TSEN54	83	81.798	Callithrix_jacchus
ENSUMAG00000008979	TSEN54	100	92.360	ENSCAFG00000004798	TSEN54	84	92.360	Canis_familiaris
ENSUMAG00000008979	TSEN54	100	92.360	ENSCAFG00020000312	TSEN54	84	92.360	Canis_lupus_dingo
ENSUMAG00000008979	TSEN54	100	82.921	ENSCHIG00000019908	TSEN54	84	82.247	Capra_hircus
ENSUMAG00000008979	TSEN54	100	82.366	ENSTSYG00000037439	TSEN54	97	82.366	Carlito_syrichta
ENSUMAG00000008979	TSEN54	100	82.472	ENSCCAG00000036624	TSEN54	83	82.472	Cebus_capucinus
ENSUMAG00000008979	TSEN54	100	82.472	ENSCATG00000042877	TSEN54	83	82.472	Cercocebus_atys
ENSUMAG00000008979	TSEN54	100	78.202	ENSCLAG00000002924	TSEN54	83	77.978	Chinchilla_lanigera
ENSUMAG00000008979	TSEN54	100	82.472	ENSCSAG00000004809	TSEN54	84	82.472	Chlorocebus_sabaeus
ENSUMAG00000008979	TSEN54	99	52.242	ENSCPBG00000028071	TSEN54	84	52.242	Chrysemys_picta_bellii
ENSUMAG00000008979	TSEN54	100	81.124	ENSCANG00000028053	TSEN54	84	81.124	Colobus_angolensis_palliatus
ENSUMAG00000008979	TSEN54	100	76.854	ENSCGRG00001020029	Tsen54	84	76.180	Cricetulus_griseus_chok1gshd
ENSUMAG00000008979	TSEN54	100	76.854	ENSCGRG00000016289	Tsen54	99	76.180	Cricetulus_griseus_crigri
ENSUMAG00000008979	TSEN54	99	38.813	ENSCSEG00000020586	tsen54	99	38.073	Cynoglossus_semilaevis
ENSUMAG00000008979	TSEN54	99	43.925	ENSDARG00000036844	tsen54	99	43.953	Danio_rerio
ENSUMAG00000008979	TSEN54	100	82.921	ENSDNOG00000018452	TSEN54	84	82.921	Dasypus_novemcinctus
ENSUMAG00000008979	TSEN54	100	78.876	ENSDORG00000004073	Tsen54	84	78.876	Dipodomys_ordii
ENSUMAG00000008979	TSEN54	99	32.174	ENSEBUG00000005203	TSEN54	82	32.174	Eptatretus_burgeri
ENSUMAG00000008979	TSEN54	100	86.966	ENSEASG00005000579	TSEN54	84	86.517	Equus_asinus_asinus
ENSUMAG00000008979	TSEN54	100	86.292	ENSECAG00000004924	TSEN54	84	85.843	Equus_caballus
ENSUMAG00000008979	TSEN54	100	82.697	ENSEEUG00000008467	TSEN54	97	82.697	Erinaceus_europaeus
ENSUMAG00000008979	TSEN54	99	43.142	ENSELUG00000017703	tsen54	78	42.241	Esox_lucius
ENSUMAG00000008979	TSEN54	100	92.360	ENSFCAG00000023712	TSEN54	84	92.360	Felis_catus
ENSUMAG00000008979	TSEN54	100	49.443	ENSFALG00000001119	TSEN54	83	50.334	Ficedula_albicollis
ENSUMAG00000008979	TSEN54	100	80.899	ENSFDAG00000019090	TSEN54	97	80.449	Fukomys_damarensis
ENSUMAG00000008979	TSEN54	99	44.898	ENSFHEG00000005470	tsen54	83	44.820	Fundulus_heteroclitus
ENSUMAG00000008979	TSEN54	77	47.899	ENSGMOG00000013146	tsen54	67	51.648	Gadus_morhua
ENSUMAG00000008979	TSEN54	99	45.676	ENSGALG00000047163	TSEN54	87	42.616	Gallus_gallus
ENSUMAG00000008979	TSEN54	99	44.118	ENSGAFG00000005111	tsen54	82	44.570	Gambusia_affinis
ENSUMAG00000008979	TSEN54	99	43.107	ENSGACG00000014987	tsen54	70	57.009	Gasterosteus_aculeatus
ENSUMAG00000008979	TSEN54	100	52.759	ENSGAGG00000006825	TSEN54	83	52.318	Gopherus_agassizii
ENSUMAG00000008979	TSEN54	100	82.022	ENSGGOG00000009417	TSEN54	87	82.022	Gorilla_gorilla
ENSUMAG00000008979	TSEN54	97	36.768	ENSHBUG00000018296	tsen54	99	36.768	Haplochromis_burtoni
ENSUMAG00000008979	TSEN54	100	80.930	ENSHGLG00000007979	TSEN54	83	81.306	Heterocephalus_glaber_female
ENSUMAG00000008979	TSEN54	100	80.930	ENSHGLG00100005497	TSEN54	83	81.306	Heterocephalus_glaber_male
ENSUMAG00000008979	TSEN54	99	42.290	ENSHCOG00000007481	tsen54	99	40.698	Hippocampus_comes
ENSUMAG00000008979	TSEN54	70	73.810	ENSIPUG00000000590	tsen54	55	73.810	Ictalurus_punctatus
ENSUMAG00000008979	TSEN54	100	76.854	ENSSTOG00000012883	TSEN54	84	76.629	Ictidomys_tridecemlineatus
ENSUMAG00000008979	TSEN54	100	78.300	ENSJJAG00000007365	Tsen54	84	77.852	Jaculus_jaculus
ENSUMAG00000008979	TSEN54	99	45.217	ENSKMAG00000006944	tsen54	83	43.778	Kryptolebias_marmoratus
ENSUMAG00000008979	TSEN54	99	41.871	ENSLBEG00000004199	tsen54	83	41.071	Labrus_bergylta
ENSUMAG00000008979	TSEN54	100	42.342	ENSLACG00000009497	TSEN54	86	42.670	Latimeria_chalumnae
ENSUMAG00000008979	TSEN54	99	45.336	ENSLOCG00000011191	tsen54	83	44.252	Lepisosteus_oculatus
ENSUMAG00000008979	TSEN54	100	83.820	ENSLAFG00000011655	TSEN54	84	83.820	Loxodonta_africana
ENSUMAG00000008979	TSEN54	100	82.472	ENSMFAG00000000712	TSEN54	84	82.472	Macaca_fascicularis
ENSUMAG00000008979	TSEN54	100	82.247	ENSMNEG00000029199	TSEN54	84	82.247	Macaca_nemestrina
ENSUMAG00000008979	TSEN54	100	82.472	ENSMLEG00000044168	TSEN54	86	82.472	Mandrillus_leucophaeus
ENSUMAG00000008979	TSEN54	99	41.943	ENSMAMG00000019773	tsen54	83	42.094	Mastacembelus_armatus
ENSUMAG00000008979	TSEN54	99	43.018	ENSMZEG00005000884	tsen54	83	43.237	Maylandia_zebra
ENSUMAG00000008979	TSEN54	100	47.566	ENSMGAG00000009556	TSEN54	84	47.566	Meleagris_gallopavo
ENSUMAG00000008979	TSEN54	100	77.753	ENSMAUG00000016838	Tsen54	84	77.079	Mesocricetus_auratus
ENSUMAG00000008979	TSEN54	100	82.247	ENSMICG00000044012	TSEN54	83	82.247	Microcebus_murinus
ENSUMAG00000008979	TSEN54	100	78.876	ENSMOCG00000021585	Tsen54	84	78.202	Microtus_ochrogaster
ENSUMAG00000008979	TSEN54	99	39.024	ENSMMOG00000020189	tsen54	79	66.667	Mola_mola
ENSUMAG00000008979	TSEN54	100	67.325	ENSMODG00000007438	TSEN54	83	67.325	Monodelphis_domestica
ENSUMAG00000008979	TSEN54	99	42.198	ENSMALG00000020573	tsen54	83	41.978	Monopterus_albus
ENSUMAG00000008979	TSEN54	100	75.955	MGP_CAROLIEiJ_G0017417	Tsen54	84	75.281	Mus_caroli
ENSUMAG00000008979	TSEN54	100	76.629	ENSMUSG00000020781	Tsen54	84	75.955	Mus_musculus
ENSUMAG00000008979	TSEN54	100	75.506	MGP_PahariEiJ_G0018547	Tsen54	84	74.831	Mus_pahari
ENSUMAG00000008979	TSEN54	100	76.629	MGP_SPRETEiJ_G0018262	Tsen54	84	75.955	Mus_spretus
ENSUMAG00000008979	TSEN54	100	91.685	ENSMPUG00000013870	TSEN54	84	91.685	Mustela_putorius_furo
ENSUMAG00000008979	TSEN54	100	84.944	ENSMLUG00000015298	TSEN54	84	84.944	Myotis_lucifugus
ENSUMAG00000008979	TSEN54	100	79.775	ENSNGAG00000015673	Tsen54	83	79.101	Nannospalax_galili
ENSUMAG00000008979	TSEN54	100	65.247	ENSMEUG00000011908	TSEN54	94	65.247	Notamacropus_eugenii
ENSUMAG00000008979	TSEN54	100	72.809	ENSOPRG00000012513	TSEN54	83	72.809	Ochotona_princeps
ENSUMAG00000008979	TSEN54	99	42.637	ENSONIG00000009543	tsen54	83	43.077	Oreochromis_niloticus
ENSUMAG00000008979	TSEN54	100	74.550	ENSOCUG00000009875	TSEN54	82	74.550	Oryctolagus_cuniculus
ENSUMAG00000008979	TSEN54	99	43.084	ENSORLG00000000852	tsen54	83	40.969	Oryzias_latipes
ENSUMAG00000008979	TSEN54	99	41.950	ENSORLG00020018221	tsen54	93	41.518	Oryzias_latipes_hni
ENSUMAG00000008979	TSEN54	99	42.212	ENSORLG00015009413	tsen54	64	66.667	Oryzias_latipes_hsok
ENSUMAG00000008979	TSEN54	99	42.664	ENSOMEG00000014402	tsen54	80	42.438	Oryzias_melastigma
ENSUMAG00000008979	TSEN54	100	77.079	ENSOGAG00000001442	TSEN54	83	77.079	Otolemur_garnettii
ENSUMAG00000008979	TSEN54	100	85.169	ENSOARG00000010361	TSEN54	97	85.169	Ovis_aries
ENSUMAG00000008979	TSEN54	100	81.124	ENSPPAG00000043519	TSEN54	89	81.573	Pan_paniscus
ENSUMAG00000008979	TSEN54	100	91.910	ENSPPRG00000009162	TSEN54	84	91.910	Panthera_pardus
ENSUMAG00000008979	TSEN54	100	90.337	ENSPTIG00000019312	TSEN54	94	90.337	Panthera_tigris_altaica
ENSUMAG00000008979	TSEN54	100	81.798	ENSPTRG00000009646	TSEN54	84	82.022	Pan_troglodytes
ENSUMAG00000008979	TSEN54	100	82.472	ENSPANG00000020133	TSEN54	83	82.472	Papio_anubis
ENSUMAG00000008979	TSEN54	100	44.944	ENSPKIG00000023018	tsen54	100	43.820	Paramormyrops_kingsleyae
ENSUMAG00000008979	TSEN54	99	52.315	ENSPSIG00000012807	TSEN54	99	51.852	Pelodiscus_sinensis
ENSUMAG00000008979	TSEN54	99	34.452	ENSPMGG00000019578	tsen54	88	33.929	Periophthalmus_magnuspinnatus
ENSUMAG00000008979	TSEN54	100	78.876	ENSPEMG00000014857	Tsen54	84	78.202	Peromyscus_maniculatus_bairdii
ENSUMAG00000008979	TSEN54	99	45.778	ENSPFOG00000022740	tsen54	83	45.212	Poecilia_formosa
ENSUMAG00000008979	TSEN54	99	45.023	ENSPLAG00000014847	tsen54	82	45.291	Poecilia_latipinna
ENSUMAG00000008979	TSEN54	99	45.638	ENSPMEG00000022876	tsen54	82	45.067	Poecilia_mexicana
ENSUMAG00000008979	TSEN54	99	44.595	ENSPREG00000013090	tsen54	82	44.796	Poecilia_reticulata
ENSUMAG00000008979	TSEN54	100	75.056	ENSPPYG00000008629	TSEN54	91	76.180	Pongo_abelii
ENSUMAG00000008979	TSEN54	94	71.429	ENSPCAG00000002093	TSEN54	82	71.429	Procavia_capensis
ENSUMAG00000008979	TSEN54	100	86.486	ENSPCOG00000027880	TSEN54	84	86.486	Propithecus_coquereli
ENSUMAG00000008979	TSEN54	100	88.764	ENSPVAG00000008446	TSEN54	84	88.764	Pteropus_vampyrus
ENSUMAG00000008979	TSEN54	99	43.848	ENSPNYG00000010217	tsen54	99	40.972	Pundamilia_nyererei
ENSUMAG00000008979	TSEN54	99	45.067	ENSPNAG00000003770	tsen54	83	43.833	Pygocentrus_nattereri
ENSUMAG00000008979	TSEN54	100	77.303	ENSRNOG00000004598	Tsen54	84	76.629	Rattus_norvegicus
ENSUMAG00000008979	TSEN54	100	82.022	ENSRBIG00000043040	TSEN54	84	82.022	Rhinopithecus_bieti
ENSUMAG00000008979	TSEN54	100	82.022	ENSRROG00000030797	TSEN54	84	82.022	Rhinopithecus_roxellana
ENSUMAG00000008979	TSEN54	100	78.652	ENSSBOG00000013543	TSEN54	82	78.652	Saimiri_boliviensis_boliviensis
ENSUMAG00000008979	TSEN54	100	66.079	ENSSHAG00000018127	TSEN54	83	66.079	Sarcophilus_harrisii
ENSUMAG00000008979	TSEN54	100	44.419	ENSSFOG00015004093	tsen54	100	41.907	Scleropages_formosus
ENSUMAG00000008979	TSEN54	99	40.481	ENSSMAG00000012449	tsen54	99	41.630	Scophthalmus_maximus
ENSUMAG00000008979	TSEN54	99	44.124	ENSSDUG00000021506	tsen54	83	43.207	Seriola_dumerili
ENSUMAG00000008979	TSEN54	99	43.681	ENSSLDG00000016303	tsen54	83	42.762	Seriola_lalandi_dorsalis
ENSUMAG00000008979	TSEN54	80	48.189	ENSSPUG00000008988	TSEN54	80	47.354	Sphenodon_punctatus
ENSUMAG00000008979	TSEN54	99	41.204	ENSSPAG00000008047	tsen54	77	59.459	Stegastes_partitus
ENSUMAG00000008979	TSEN54	99	44.018	ENSSPAG00000008098	-	77	59.459	Stegastes_partitus
ENSUMAG00000008979	TSEN54	100	88.989	ENSSSCG00000036852	TSEN54	93	88.989	Sus_scrofa
ENSUMAG00000008979	TSEN54	100	50.562	ENSTGUG00000008548	TSEN54	97	50.562	Taeniopygia_guttata
ENSUMAG00000008979	TSEN54	99	41.950	ENSTRUG00000004230	tsen54	62	65.657	Takifugu_rubripes
ENSUMAG00000008979	TSEN54	54	44.444	ENSTNIG00000011281	tsen54	84	41.556	Tetraodon_nigroviridis
ENSUMAG00000008979	TSEN54	100	88.631	ENSTTRG00000015828	TSEN54	98	88.565	Tursiops_truncatus
ENSUMAG00000008979	TSEN54	100	99.534	ENSUAMG00000010045	TSEN54	100	99.534	Ursus_americanus
ENSUMAG00000008979	TSEN54	100	91.910	ENSVVUG00000011411	TSEN54	85	91.910	Vulpes_vulpes
ENSUMAG00000008979	TSEN54	99	45.212	ENSXETG00000012532	tsen54	82	44.098	Xenopus_tropicalis
ENSUMAG00000008979	TSEN54	99	42.396	ENSXCOG00000018245	tsen54	99	41.339	Xiphophorus_couchianus
ENSUMAG00000008979	TSEN54	99	45.618	ENSXMAG00000018818	tsen54	82	44.719	Xiphophorus_maculatus