EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000009211 (Gene tree)
Gene ID: 103666466
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 127274 bases
Position: chrKK498615.1:6882099-7009372
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000012402	PUF	PF00806.19	1.6e-71	1	8
ENSUMAP00000012402	PUF	PF00806.19	1.6e-71	2	8
ENSUMAP00000012402	PUF	PF00806.19	1.6e-71	3	8
ENSUMAP00000012402	PUF	PF00806.19	1.6e-71	4	8
ENSUMAP00000012402	PUF	PF00806.19	1.6e-71	5	8
ENSUMAP00000012402	PUF	PF00806.19	1.6e-71	6	8
ENSUMAP00000012402	PUF	PF00806.19	1.6e-71	7	8
ENSUMAP00000012402	PUF	PF00806.19	1.6e-71	8	8
ENSUMAP00000012381	PUF	PF00806.19	3.5e-71	1	8
ENSUMAP00000012381	PUF	PF00806.19	3.5e-71	2	8
ENSUMAP00000012381	PUF	PF00806.19	3.5e-71	3	8
ENSUMAP00000012381	PUF	PF00806.19	3.5e-71	4	8
ENSUMAP00000012381	PUF	PF00806.19	3.5e-71	5	8
ENSUMAP00000012381	PUF	PF00806.19	3.5e-71	6	8
ENSUMAP00000012381	PUF	PF00806.19	3.5e-71	7	8
ENSUMAP00000012381	PUF	PF00806.19	3.5e-71	8	8
ENSUMAP00000012388	PUF	PF00806.19	1.2e-58	1	7
ENSUMAP00000012388	PUF	PF00806.19	1.2e-58	2	7
ENSUMAP00000012388	PUF	PF00806.19	1.2e-58	3	7
ENSUMAP00000012388	PUF	PF00806.19	1.2e-58	4	7
ENSUMAP00000012388	PUF	PF00806.19	1.2e-58	5	7
ENSUMAP00000012388	PUF	PF00806.19	1.2e-58	6	7
ENSUMAP00000012388	PUF	PF00806.19	1.2e-58	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000014699	PUM1-201	4727	-	ENSUMAP00000012381	1109 (aa)	-	-
ENSUMAT00000014720	PUM1-203	4439	-	ENSUMAP00000012402	1013 (aa)	-	-
ENSUMAT00000014706	PUM1-202	4601	-	ENSUMAP00000012388	1067 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000009211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000009211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000009211	PUM1	89	77.154	ENSUMAG00000023198	PUM2	100	77.355

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000009211	PUM1	100	99.758	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSUMAG00000009211	PUM1	89	72.946	ENSAPOG00000021632	pum1	100	75.500	Acanthochromis_polyacanthus
ENSUMAG00000009211	PUM1	100	100.000	ENSAMEG00000017656	PUM1	97	100.000	Ailuropoda_melanoleuca
ENSUMAG00000009211	PUM1	57	91.566	ENSACIG00000021013	pum1	93	91.084	Amphilophus_citrinellus
ENSUMAG00000009211	PUM1	89	76.453	ENSAOCG00000003944	pum1	100	79.200	Amphiprion_ocellaris
ENSUMAG00000009211	PUM1	89	76.453	ENSAPEG00000014550	pum1	100	79.200	Amphiprion_percula
ENSUMAG00000009211	PUM1	89	76.754	ENSATEG00000016004	pum1	100	79.100	Anabas_testudineus
ENSUMAG00000009211	PUM1	100	98.792	ENSAPLG00000009351	PUM1	95	98.792	Anas_platyrhynchos
ENSUMAG00000009211	PUM1	100	99.034	ENSACAG00000000682	PUM1	92	99.034	Anolis_carolinensis
ENSUMAG00000009211	PUM1	100	99.099	ENSANAG00000027865	PUM1	100	99.099	Aotus_nancymaae
ENSUMAG00000009211	PUM1	57	93.237	ENSAMXG00000020607	pum1	92	93.237	Astyanax_mexicanus
ENSUMAG00000009211	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	99.549	Bos_taurus
ENSUMAG00000009211	PUM1	100	99.758	ENSCJAG00000006035	PUM1	100	99.099	Callithrix_jacchus
ENSUMAG00000009211	PUM1	100	100.000	ENSCAFG00000011205	PUM1	95	100.000	Canis_familiaris
ENSUMAG00000009211	PUM1	90	100.000	ENSCAFG00020024616	PUM1	99	97.835	Canis_lupus_dingo
ENSUMAG00000009211	PUM1	100	99.517	ENSCHIG00000012952	PUM1	100	99.369	Capra_hircus
ENSUMAG00000009211	PUM1	100	99.758	ENSTSYG00000008868	PUM1	100	95.315	Carlito_syrichta
ENSUMAG00000009211	PUM1	100	99.275	ENSCPOG00000031613	PUM1	95	99.275	Cavia_porcellus
ENSUMAG00000009211	PUM1	100	99.758	ENSCATG00000017991	PUM1	100	97.024	Cercocebus_atys
ENSUMAG00000009211	PUM1	100	99.275	ENSCLAG00000007662	PUM1	100	98.829	Chinchilla_lanigera
ENSUMAG00000009211	PUM1	100	99.758	ENSCSAG00000001028	PUM1	95	99.758	Chlorocebus_sabaeus
ENSUMAG00000009211	PUM1	99	96.264	ENSCHOG00000010245	PUM1	93	96.115	Choloepus_hoffmanni
ENSUMAG00000009211	PUM1	100	98.792	ENSCPBG00000009288	PUM1	100	97.477	Chrysemys_picta_bellii
ENSUMAG00000009211	PUM1	100	99.758	ENSCANG00000042606	PUM1	100	99.189	Colobus_angolensis_palliatus
ENSUMAG00000009211	PUM1	100	98.792	ENSCGRG00001024949	Pum1	95	98.792	Cricetulus_griseus_chok1gshd
ENSUMAG00000009211	PUM1	100	98.792	ENSCGRG00000014197	Pum1	95	98.792	Cricetulus_griseus_crigri
ENSUMAG00000009211	PUM1	100	93.478	ENSDARG00000099256	pum1	95	94.408	Danio_rerio
ENSUMAG00000009211	PUM1	100	99.517	ENSDNOG00000010939	PUM1	95	99.517	Dasypus_novemcinctus
ENSUMAG00000009211	PUM1	89	98.182	ENSDORG00000001875	Pum1	100	98.182	Dipodomys_ordii
ENSUMAG00000009211	PUM1	87	95.183	ENSETEG00000004355	PUM1	82	95.645	Echinops_telfairi
ENSUMAG00000009211	PUM1	100	99.517	ENSEASG00005010813	PUM1	95	99.517	Equus_asinus_asinus
ENSUMAG00000009211	PUM1	100	99.517	ENSECAG00000021369	PUM1	95	99.517	Equus_caballus
ENSUMAG00000009211	PUM1	79	100.000	ENSEEUG00000003871	PUM1	71	100.000	Erinaceus_europaeus
ENSUMAG00000009211	PUM1	100	59.462	ENSELUG00000002409	pum1	95	93.720	Esox_lucius
ENSUMAG00000009211	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	99.730	Felis_catus
ENSUMAG00000009211	PUM1	100	99.034	ENSFALG00000001214	PUM1	93	99.034	Ficedula_albicollis
ENSUMAG00000009211	PUM1	100	99.270	ENSFDAG00000011319	PUM1	95	99.275	Fukomys_damarensis
ENSUMAG00000009211	PUM1	91	91.566	ENSGMOG00000010491	pum1	94	91.084	Gadus_morhua
ENSUMAG00000009211	PUM1	100	99.194	ENSGALG00000042598	PUM1	95	99.194	Gallus_gallus
ENSUMAG00000009211	PUM1	89	75.852	ENSGAFG00000015617	pum1	100	78.200	Gambusia_affinis
ENSUMAG00000009211	PUM1	100	98.792	ENSGAGG00000001290	PUM1	95	98.792	Gopherus_agassizii
ENSUMAG00000009211	PUM1	100	99.758	ENSGGOG00000011983	PUM1	100	99.189	Gorilla_gorilla
ENSUMAG00000009211	PUM1	100	99.027	ENSHGLG00000013819	Pum1	95	99.034	Heterocephalus_glaber_female
ENSUMAG00000009211	PUM1	100	99.027	ENSHGLG00100008621	Pum1	95	99.034	Heterocephalus_glaber_male
ENSUMAG00000009211	PUM1	89	73.488	ENSIPUG00000020421	pum1	93	92.512	Ictalurus_punctatus
ENSUMAG00000009211	PUM1	100	99.275	ENSSTOG00000010757	PUM1	95	99.275	Ictidomys_tridecemlineatus
ENSUMAG00000009211	PUM1	100	99.034	ENSJJAG00000000530	Pum1	95	99.034	Jaculus_jaculus
ENSUMAG00000009211	PUM1	100	92.048	ENSLBEG00000002527	pum1	94	91.566	Labrus_bergylta
ENSUMAG00000009211	PUM1	100	88.010	ENSLACG00000017188	PUM1	95	88.010	Latimeria_chalumnae
ENSUMAG00000009211	PUM1	100	96.860	ENSLOCG00000005210	pum1	95	96.860	Lepisosteus_oculatus
ENSUMAG00000009211	PUM1	100	99.275	ENSLAFG00000003178	PUM1	95	96.377	Loxodonta_africana
ENSUMAG00000009211	PUM1	100	99.758	ENSMFAG00000010291	PUM1	100	99.459	Macaca_fascicularis
ENSUMAG00000009211	PUM1	100	99.758	ENSMMUG00000013520	PUM1	100	99.189	Macaca_mulatta
ENSUMAG00000009211	PUM1	100	99.758	ENSMNEG00000034639	PUM1	100	99.189	Macaca_nemestrina
ENSUMAG00000009211	PUM1	100	99.758	ENSMLEG00000038743	PUM1	100	99.189	Mandrillus_leucophaeus
ENSUMAG00000009211	PUM1	100	99.034	ENSMGAG00000000724	PUM1	95	99.034	Meleagris_gallopavo
ENSUMAG00000009211	PUM1	100	99.275	ENSMAUG00000022090	Pum1	95	99.275	Mesocricetus_auratus
ENSUMAG00000009211	PUM1	100	96.396	ENSMICG00000012213	-	100	96.396	Microcebus_murinus
ENSUMAG00000009211	PUM1	100	99.517	ENSMICG00000007713	-	100	99.009	Microcebus_murinus
ENSUMAG00000009211	PUM1	100	99.034	ENSMOCG00000015463	Pum1	95	99.034	Microtus_ochrogaster
ENSUMAG00000009211	PUM1	89	74.447	ENSMMOG00000019817	pum1	100	76.305	Mola_mola
ENSUMAG00000009211	PUM1	100	98.309	ENSMODG00000017067	PUM1	95	98.309	Monodelphis_domestica
ENSUMAG00000009211	PUM1	89	77.355	ENSMALG00000016399	pum1	100	79.000	Monopterus_albus
ENSUMAG00000009211	PUM1	100	99.034	MGP_CAROLIEiJ_G0026549	Pum1	95	99.034	Mus_caroli
ENSUMAG00000009211	PUM1	100	99.275	ENSMUSG00000028580	Pum1	95	99.275	Mus_musculus
ENSUMAG00000009211	PUM1	100	99.275	MGP_PahariEiJ_G0028881	Pum1	95	99.275	Mus_pahari
ENSUMAG00000009211	PUM1	100	99.275	MGP_SPRETEiJ_G0027529	Pum1	95	99.275	Mus_spretus
ENSUMAG00000009211	PUM1	100	99.275	ENSMPUG00000015454	PUM1	95	99.275	Mustela_putorius_furo
ENSUMAG00000009211	PUM1	100	99.517	ENSMLUG00000006490	PUM1	95	99.517	Myotis_lucifugus
ENSUMAG00000009211	PUM1	100	99.275	ENSNGAG00000002378	Pum1	95	99.275	Nannospalax_galili
ENSUMAG00000009211	PUM1	55	91.084	ENSNBRG00000010689	pum1	58	90.602	Neolamprologus_brichardi
ENSUMAG00000009211	PUM1	100	97.658	ENSNLEG00000001151	PUM1	100	97.658	Nomascus_leucogenys
ENSUMAG00000009211	PUM1	73	100.000	ENSMEUG00000000976	-	69	97.297	Notamacropus_eugenii
ENSUMAG00000009211	PUM1	83	99.065	ENSOPRG00000001776	PUM1	71	99.065	Ochotona_princeps
ENSUMAG00000009211	PUM1	100	99.275	ENSODEG00000003465	PUM1	95	99.275	Octodon_degus
ENSUMAG00000009211	PUM1	100	91.587	ENSONIG00000002290	pum1	93	91.325	Oreochromis_niloticus
ENSUMAG00000009211	PUM1	80	82.885	ENSOANG00000004902	-	92	82.443	Ornithorhynchus_anatinus
ENSUMAG00000009211	PUM1	100	98.068	ENSOCUG00000008641	PUM1	95	98.068	Oryctolagus_cuniculus
ENSUMAG00000009211	PUM1	80	93.494	ENSORLG00000011482	pum1	94	91.084	Oryzias_latipes
ENSUMAG00000009211	PUM1	89	76.024	ENSOMEG00000009312	pum1	100	76.869	Oryzias_melastigma
ENSUMAG00000009211	PUM1	100	96.133	ENSOGAG00000011063	PUM1	95	96.523	Otolemur_garnettii
ENSUMAG00000009211	PUM1	100	100.000	ENSOARG00000001899	PUM1	100	100.000	Ovis_aries
ENSUMAG00000009211	PUM1	100	99.758	ENSPPAG00000044003	PUM1	100	99.189	Pan_paniscus
ENSUMAG00000009211	PUM1	100	100.000	ENSPPRG00000001370	PUM1	94	100.000	Panthera_pardus
ENSUMAG00000009211	PUM1	100	100.000	ENSPTIG00000010798	PUM1	94	100.000	Panthera_tigris_altaica
ENSUMAG00000009211	PUM1	100	99.758	ENSPTRG00000000453	PUM1	100	99.189	Pan_troglodytes
ENSUMAG00000009211	PUM1	100	99.758	ENSPANG00000016338	PUM1	100	99.459	Papio_anubis
ENSUMAG00000009211	PUM1	100	79.306	ENSPKIG00000010578	pum1	100	77.935	Paramormyrops_kingsleyae
ENSUMAG00000009211	PUM1	100	98.792	ENSPSIG00000014118	PUM1	95	98.792	Pelodiscus_sinensis
ENSUMAG00000009211	PUM1	86	91.807	ENSPMGG00000005836	pum1	90	91.325	Periophthalmus_magnuspinnatus
ENSUMAG00000009211	PUM1	100	99.275	ENSPEMG00000010009	Pum1	95	99.275	Peromyscus_maniculatus_bairdii
ENSUMAG00000009211	PUM1	100	98.387	ENSPCIG00000014151	PUM1	100	97.750	Phascolarctos_cinereus
ENSUMAG00000009211	PUM1	94	91.325	ENSPFOG00000007289	pum1	93	90.843	Poecilia_formosa
ENSUMAG00000009211	PUM1	100	91.325	ENSPLAG00000007256	pum1	94	90.843	Poecilia_latipinna
ENSUMAG00000009211	PUM1	57	91.325	ENSPREG00000005195	pum1	57	90.361	Poecilia_reticulata
ENSUMAG00000009211	PUM1	100	99.758	ENSPPYG00000001621	PUM1	95	99.758	Pongo_abelii
ENSUMAG00000009211	PUM1	90	99.691	ENSPCAG00000001979	PUM1	74	99.691	Procavia_capensis
ENSUMAG00000009211	PUM1	100	99.517	ENSPCOG00000004398	PUM1	100	99.009	Propithecus_coquereli
ENSUMAG00000009211	PUM1	100	96.266	ENSPVAG00000005207	PUM1	93	96.657	Pteropus_vampyrus
ENSUMAG00000009211	PUM1	89	72.445	ENSPNYG00000009518	pum1	100	74.900	Pundamilia_nyererei
ENSUMAG00000009211	PUM1	100	93.478	ENSPNAG00000026728	pum1	95	93.478	Pygocentrus_nattereri
ENSUMAG00000009211	PUM1	100	98.792	ENSRNOG00000011709	Pum1	95	98.792	Rattus_norvegicus
ENSUMAG00000009211	PUM1	100	99.758	ENSRBIG00000042521	PUM1	100	99.459	Rhinopithecus_bieti
ENSUMAG00000009211	PUM1	100	99.758	ENSRROG00000020156	PUM1	100	99.189	Rhinopithecus_roxellana
ENSUMAG00000009211	PUM1	100	99.758	ENSSBOG00000032037	PUM1	100	99.189	Saimiri_boliviensis_boliviensis
ENSUMAG00000009211	PUM1	100	98.309	ENSSHAG00000010918	PUM1	95	98.309	Sarcophilus_harrisii
ENSUMAG00000009211	PUM1	100	92.048	ENSSMAG00000010918	pum1	94	91.566	Scophthalmus_maximus
ENSUMAG00000009211	PUM1	54	92.048	ENSSLDG00000009667	pum1	53	91.566	Seriola_lalandi_dorsalis
ENSUMAG00000009211	PUM1	97	99.758	ENSSARG00000003055	PUM1	87	100.000	Sorex_araneus
ENSUMAG00000009211	PUM1	100	99.034	ENSSPUG00000006267	PUM1	95	99.034	Sphenodon_punctatus
ENSUMAG00000009211	PUM1	89	76.453	ENSSPAG00000016636	pum1	100	79.200	Stegastes_partitus
ENSUMAG00000009211	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	99.729	Sus_scrofa
ENSUMAG00000009211	PUM1	57	92.048	ENSTRUG00000013121	pum1	58	91.084	Takifugu_rubripes
ENSUMAG00000009211	PUM1	90	97.266	ENSTBEG00000013810	PUM1	82	97.266	Tupaia_belangeri
ENSUMAG00000009211	PUM1	91	99.517	ENSTTRG00000007436	PUM1	84	99.517	Tursiops_truncatus
ENSUMAG00000009211	PUM1	99	98.387	ENSUAMG00000018262	-	95	98.387	Ursus_americanus
ENSUMAG00000009211	PUM1	92	100.000	ENSVPAG00000005902	PUM1	87	100.000	Vicugna_pacos
ENSUMAG00000009211	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	99.910	Vulpes_vulpes
ENSUMAG00000009211	PUM1	100	89.614	ENSXETG00000012904	pum1	95	89.614	Xenopus_tropicalis
ENSUMAG00000009211	PUM1	57	91.325	ENSXMAG00000002945	pum1	53	90.843	Xiphophorus_maculatus