EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSUMAG00000009328 (Gene tree)
Gene ID
103667158
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Ursus_maritimus
Status
putative
Strand
Minus strand
Length
63206 bases
Position
chrKK498618.1:1905602-1968807
Accession
103667158
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSUMAP00000012549tRNA_anti-codonPF01336.258.9e-1211
ENSUMAP00000012546tRNA_anti-codonPF01336.251.1e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSUMAT00000014893RPA1-2012348-ENSUMAP00000012546616 (aa)XP_008693499UPI0004DFEB3A
ENSUMAT00000014896RPA1-2022255-ENSUMAP00000012549585 (aa)XP_008693500UPI0004E00CD4
Gene Model
Click here to download ENSUMAG00000009328's gene model file
Pathways
Pathway IDPathway NameSource
umr03030DNA replicationKEGG
umr03420Nucleotide excision repairKEGG
umr03430Mismatch repairKEGG
umr03440Homologous recombinationKEGG
umr03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000009328's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSUMAG00000009328RPA19563.719ENSAPOG00000019409RPA18463.719Acanthochromis_polyacanthus
ENSUMAG00000009328RPA19963.011ENSAPOG00000011658rpa19965.054Acanthochromis_polyacanthus
ENSUMAG00000009328RPA19998.194ENSAMEG00000007706RPA19898.194Ailuropoda_melanoleuca
ENSUMAG00000009328RPA19559.492ENSACIG00000012881RPA19959.153Amphilophus_citrinellus
ENSUMAG00000009328RPA19558.406ENSACIG00000007277rpa19958.406Amphilophus_citrinellus
ENSUMAG00000009328RPA19963.235ENSAOCG00000023376rpa19965.658Amphiprion_ocellaris
ENSUMAG00000009328RPA19563.182ENSAOCG00000009003RPA19953.632Amphiprion_ocellaris
ENSUMAG00000009328RPA19963.072ENSAPEG00000008634rpa19965.480Amphiprion_percula
ENSUMAG00000009328RPA19563.864ENSAPEG00000019132RPA18763.864Amphiprion_percula
ENSUMAG00000009328RPA19465.364ENSATEG00000022024rpa19965.364Anabas_testudineus
ENSUMAG00000009328RPA19965.509ENSATEG00000006443RPA18965.509Anabas_testudineus
ENSUMAG00000009328RPA19865.879ENSAPLG00000012442RPA110065.879Anas_platyrhynchos
ENSUMAG00000009328RPA19964.942ENSACAG00000014490RPA19965.275Anolis_carolinensis
ENSUMAG00000009328RPA19890.035ENSANAG00000023456RPA110090.035Aotus_nancymaae
ENSUMAG00000009328RPA19958.621ENSACLG00000005223RPA19957.994Astatotilapia_calliptera
ENSUMAG00000009328RPA19365.647ENSACLG00000006640rpa19965.647Astatotilapia_calliptera
ENSUMAG00000009328RPA19961.889ENSAMXG00000008418rpa19964.505Astyanax_mexicanus
ENSUMAG00000009328RPA110092.370ENSBTAG00000009711RPA110092.370Bos_taurus
ENSUMAG00000009328RPA17830.870WBGene00017546rpa-16930.435Caenorhabditis_elegans
ENSUMAG00000009328RPA110088.799ENSCJAG00000001848RPA110088.799Callithrix_jacchus
ENSUMAG00000009328RPA110095.779ENSCAFG00000019249RPA110095.779Canis_familiaris
ENSUMAG00000009328RPA110095.779ENSCAFG00020009847RPA110095.779Canis_lupus_dingo
ENSUMAG00000009328RPA110092.045ENSCHIG00000026308RPA110092.045Capra_hircus
ENSUMAG00000009328RPA110091.086ENSTSYG00000003482-10090.762Carlito_syrichta
ENSUMAG00000009328RPA110086.201ENSCPOG00000000035RPA110086.201Cavia_porcellus
ENSUMAG00000009328RPA110077.383ENSCCAG00000010981RPA110077.383Cebus_capucinus
ENSUMAG00000009328RPA110082.630ENSCLAG00000015045-10082.630Chinchilla_lanigera
ENSUMAG00000009328RPA19987.459ENSCLAG00000005185-9987.459Chinchilla_lanigera
ENSUMAG00000009328RPA110077.060ENSCSAG00000013833RPA110077.060Chlorocebus_sabaeus
ENSUMAG00000009328RPA17592.938ENSCHOG00000009454-10092.938Choloepus_hoffmanni
ENSUMAG00000009328RPA19588.605ENSCHOG00000013540-10088.605Choloepus_hoffmanni
ENSUMAG00000009328RPA19978.374ENSCPBG00000020377RPA19978.947Chrysemys_picta_bellii
ENSUMAG00000009328RPA19940.909ENSCING00000023482-9840.765Ciona_intestinalis
ENSUMAG00000009328RPA19889.721ENSCANG00000030911RPA110089.721Colobus_angolensis_palliatus
ENSUMAG00000009328RPA19988.511ENSCGRG00001008197Rpa19988.511Cricetulus_griseus_chok1gshd
ENSUMAG00000009328RPA17990.693ENSCGRG00000000582Rpa19987.771Cricetulus_griseus_crigri
ENSUMAG00000009328RPA19952.229ENSCSEG00000012726RPA19853.093Cynoglossus_semilaevis
ENSUMAG00000009328RPA19960.294ENSCSEG00000013066rpa19960.098Cynoglossus_semilaevis
ENSUMAG00000009328RPA19565.526ENSCVAG00000013446-9652.308Cyprinodon_variegatus
ENSUMAG00000009328RPA19962.643ENSCVAG00000019431rpa19965.225Cyprinodon_variegatus
ENSUMAG00000009328RPA19963.577ENSDARG00000003938rpa19963.355Danio_rerio
ENSUMAG00000009328RPA19991.598ENSDNOG00000017218RPA19991.598Dasypus_novemcinctus
ENSUMAG00000009328RPA110088.961ENSDORG00000006199Rpa110088.961Dipodomys_ordii
ENSUMAG00000009328RPA19942.237FBgn0010173RpA-709842.809Drosophila_melanogaster
ENSUMAG00000009328RPA18386.598ENSETEG00000017608RPA18286.598Echinops_telfairi
ENSUMAG00000009328RPA19893.881ENSEASG00005009372RPA110093.881Equus_asinus_asinus
ENSUMAG00000009328RPA110093.344ENSECAG00000023886RPA110093.344Equus_caballus
ENSUMAG00000009328RPA17293.333ENSEEUG00000002186-6893.333Erinaceus_europaeus
ENSUMAG00000009328RPA19961.426ENSELUG00000021071rpa19961.386Esox_lucius
ENSUMAG00000009328RPA18759.961ENSELUG00000006136RPA19959.961Esox_lucius
ENSUMAG00000009328RPA110093.517ENSFCAG00000006306RPA19993.517Felis_catus
ENSUMAG00000009328RPA110074.313ENSFALG00000006575RPA19974.152Ficedula_albicollis
ENSUMAG00000009328RPA19988.925ENSFDAG00000007720RPA19988.925Fukomys_damarensis
ENSUMAG00000009328RPA19961.639ENSFHEG00000003580rpa19961.184Fundulus_heteroclitus
ENSUMAG00000009328RPA19961.790ENSGMOG00000010382rpa19961.790Gadus_morhua
ENSUMAG00000009328RPA110075.041ENSGALG00000003072RPA19975.041Gallus_gallus
ENSUMAG00000009328RPA19862.946ENSGAFG00000020953RPA19062.946Gambusia_affinis
ENSUMAG00000009328RPA19962.336ENSGAFG00000012916rpa19962.312Gambusia_affinis
ENSUMAG00000009328RPA19961.252ENSGACG00000010856rpa19961.252Gasterosteus_aculeatus
ENSUMAG00000009328RPA19978.374ENSGAGG00000013611RPA19978.374Gopherus_agassizii
ENSUMAG00000009328RPA110090.940ENSGGOG00000014186RPA110090.940Gorilla_gorilla
ENSUMAG00000009328RPA19962.908ENSHBUG00000017773rpa19962.895Haplochromis_burtoni
ENSUMAG00000009328RPA19656.250ENSHBUG00000009348RPA19956.250Haplochromis_burtoni
ENSUMAG00000009328RPA19989.088ENSHGLG00000008846RPA110089.088Heterocephalus_glaber_female
ENSUMAG00000009328RPA19989.088ENSHGLG00100017755-10089.088Heterocephalus_glaber_male
ENSUMAG00000009328RPA110083.766ENSHGLG00100000799-10083.766Heterocephalus_glaber_male
ENSUMAG00000009328RPA110076.136ENSHGLG00100002005-10076.136Heterocephalus_glaber_male
ENSUMAG00000009328RPA19960.784ENSHCOG00000001401rpa19960.458Hippocampus_comes
ENSUMAG00000009328RPA19946.949ENSHCOG00000000351RPA19749.024Hippocampus_comes
ENSUMAG00000009328RPA19961.951ENSIPUG00000004400rpa19961.526Ictalurus_punctatus
ENSUMAG00000009328RPA19884.046ENSSTOG00000022475RPA19884.046Ictidomys_tridecemlineatus
ENSUMAG00000009328RPA19589.626ENSJJAG00000000876Rpa19889.626Jaculus_jaculus
ENSUMAG00000009328RPA19955.665ENSKMAG00000000234RPA19955.665Kryptolebias_marmoratus
ENSUMAG00000009328RPA19960.458ENSKMAG00000005605rpa19961.011Kryptolebias_marmoratus
ENSUMAG00000009328RPA19964.028ENSLBEG00000021604rpa19964.028Labrus_bergylta
ENSUMAG00000009328RPA19762.585ENSLBEG00000002281RPA18062.585Labrus_bergylta
ENSUMAG00000009328RPA18166.333ENSLACG00000007210RPA19965.331Latimeria_chalumnae
ENSUMAG00000009328RPA19966.450ENSLOCG00000006397rpa19966.124Lepisosteus_oculatus
ENSUMAG00000009328RPA19989.677ENSLAFG00000015354RPA19989.677Loxodonta_africana
ENSUMAG00000009328RPA18289.526ENSMFAG00000036138-10089.526Macaca_fascicularis
ENSUMAG00000009328RPA110081.331ENSMMUG00000002442-10081.331Macaca_mulatta
ENSUMAG00000009328RPA19888.926ENSMMUG00000011604-10088.926Macaca_mulatta
ENSUMAG00000009328RPA110079.046ENSMNEG00000029837-10088.000Macaca_nemestrina
ENSUMAG00000009328RPA110085.552ENSMNEG00000031632-10085.552Macaca_nemestrina
ENSUMAG00000009328RPA19882.838ENSMLEG00000038768-10083.003Mandrillus_leucophaeus
ENSUMAG00000009328RPA19963.194ENSMAMG00000020097RPA19061.384Mastacembelus_armatus
ENSUMAG00000009328RPA19962.833ENSMAMG00000017993rpa19966.058Mastacembelus_armatus
ENSUMAG00000009328RPA19958.621ENSMZEG00005024731RPA19957.994Maylandia_zebra
ENSUMAG00000009328RPA19962.908ENSMZEG00005007551rpa19962.895Maylandia_zebra
ENSUMAG00000009328RPA19974.430ENSMGAG00000005315RPA19974.430Meleagris_gallopavo
ENSUMAG00000009328RPA19789.667ENSMAUG00000010474Rpa19989.667Mesocricetus_auratus
ENSUMAG00000009328RPA110091.396ENSMICG00000012867RPA110091.396Microcebus_murinus
ENSUMAG00000009328RPA19988.581ENSMOCG00000013019Rpa19988.581Microtus_ochrogaster
ENSUMAG00000009328RPA19961.765ENSMMOG00000014292rpa19962.931Mola_mola
ENSUMAG00000009328RPA19757.313ENSMMOG00000010868RPA19760.132Mola_mola
ENSUMAG00000009328RPA19984.039ENSMODG00000010549RPA19984.039Monodelphis_domestica
ENSUMAG00000009328RPA19963.547ENSMALG00000011453rpa19963.652Monopterus_albus
ENSUMAG00000009328RPA19860.086ENSMALG00000001208RPA18557.873Monopterus_albus
ENSUMAG00000009328RPA19987.825MGP_CAROLIEiJ_G0016734Rpa19987.825Mus_caroli
ENSUMAG00000009328RPA19985.691ENSMUSG00000000751Rpa19985.691Mus_musculus
ENSUMAG00000009328RPA19988.691MGP_PahariEiJ_G0017871Rpa19988.691Mus_pahari
ENSUMAG00000009328RPA19985.554MGP_SPRETEiJ_G0017577Rpa19985.554Mus_spretus
ENSUMAG00000009328RPA110095.617ENSMPUG00000013119RPA110095.617Mustela_putorius_furo
ENSUMAG00000009328RPA110089.050ENSMLUG00000006113RPA110089.050Myotis_lucifugus
ENSUMAG00000009328RPA19588.455ENSNGAG00000004522Rpa19488.455Nannospalax_galili
ENSUMAG00000009328RPA19465.419ENSNBRG00000020595rpa19965.419Neolamprologus_brichardi
ENSUMAG00000009328RPA19658.103ENSNBRG00000009672RPA19558.103Neolamprologus_brichardi
ENSUMAG00000009328RPA110088.149ENSNLEG00000017149RPA110088.149Nomascus_leucogenys
ENSUMAG00000009328RPA19873.754ENSMEUG00000006714RPA19972.924Notamacropus_eugenii
ENSUMAG00000009328RPA19584.925ENSODEG00000009038RPA19684.925Octodon_degus
ENSUMAG00000009328RPA19963.107ENSONIG00000013135rpa19962.885Oreochromis_niloticus
ENSUMAG00000009328RPA19883.887ENSOANG00000010880RPA19984.053Ornithorhynchus_anatinus
ENSUMAG00000009328RPA110087.307ENSOCUG00000001504RPA110087.307Oryctolagus_cuniculus
ENSUMAG00000009328RPA19964.237ENSORLG00000003368RPA19953.364Oryzias_latipes
ENSUMAG00000009328RPA19962.667ENSORLG00000004856rpa19962.667Oryzias_latipes
ENSUMAG00000009328RPA19962.500ENSORLG00020008980rpa19962.500Oryzias_latipes_hni
ENSUMAG00000009328RPA19963.004ENSORLG00020015284RPA18763.004Oryzias_latipes_hni
ENSUMAG00000009328RPA17162.077ENSORLG00015005867-9860.000Oryzias_latipes_hsok
ENSUMAG00000009328RPA19962.500ENSORLG00015013982rpa19962.500Oryzias_latipes_hsok
ENSUMAG00000009328RPA19953.822ENSORLG00015020383RPA19953.894Oryzias_latipes_hsok
ENSUMAG00000009328RPA19953.943ENSOMEG00000011040RPA19957.726Oryzias_melastigma
ENSUMAG00000009328RPA19960.848ENSOMEG00000004704rpa19960.458Oryzias_melastigma
ENSUMAG00000009328RPA110090.097ENSOGAG00000005581-10090.097Otolemur_garnettii
ENSUMAG00000009328RPA19486.316ENSOGAG00000029379-10093.651Otolemur_garnettii
ENSUMAG00000009328RPA110092.045ENSOARG00000014479RPA110092.045Ovis_aries
ENSUMAG00000009328RPA110088.799ENSPPAG00000039680RPA110088.799Pan_paniscus
ENSUMAG00000009328RPA110093.193ENSPPRG00000011807RPA19993.193Panthera_pardus
ENSUMAG00000009328RPA110093.031ENSPTIG00000007898RPA19993.031Panthera_tigris_altaica
ENSUMAG00000009328RPA110088.799ENSPTRG00000008539RPA110088.799Pan_troglodytes
ENSUMAG00000009328RPA110088.799ENSPANG00000024592RPA110088.799Papio_anubis
ENSUMAG00000009328RPA19461.750ENSPKIG00000008053rpa19461.750Paramormyrops_kingsleyae
ENSUMAG00000009328RPA19777.500ENSPSIG00000015617RPA19977.500Pelodiscus_sinensis
ENSUMAG00000009328RPA19956.143ENSPMGG00000000543RPA19956.703Periophthalmus_magnuspinnatus
ENSUMAG00000009328RPA19864.236ENSPMGG00000011589rpa19964.410Periophthalmus_magnuspinnatus
ENSUMAG00000009328RPA19989.560ENSPEMG00000021061Rpa19989.560Peromyscus_maniculatus_bairdii
ENSUMAG00000009328RPA19982.602ENSPCIG00000019049RPA19983.252Phascolarctos_cinereus
ENSUMAG00000009328RPA19963.054ENSPFOG00000003987rpa19962.333Poecilia_formosa
ENSUMAG00000009328RPA19463.814ENSPLAG00000008844-8763.814Poecilia_latipinna
ENSUMAG00000009328RPA19962.562ENSPLAG00000004984rpa19962.167Poecilia_latipinna
ENSUMAG00000009328RPA19064.059ENSPMEG00000003627-8764.059Poecilia_mexicana
ENSUMAG00000009328RPA19963.218ENSPMEG00000020602rpa19964.286Poecilia_mexicana
ENSUMAG00000009328RPA19763.170ENSPREG00000010119RPA18763.946Poecilia_reticulata
ENSUMAG00000009328RPA19156.708ENSPREG00000010174rpa19555.755Poecilia_reticulata
ENSUMAG00000009328RPA110092.208ENSPCOG00000001799RPA110092.208Propithecus_coquereli
ENSUMAG00000009328RPA110092.532ENSPVAG00000002149RPA110092.532Pteropus_vampyrus
ENSUMAG00000009328RPA19958.307ENSPNYG00000024165RPA19957.680Pundamilia_nyererei
ENSUMAG00000009328RPA19963.072ENSPNYG00000016316rpa19965.591Pundamilia_nyererei
ENSUMAG00000009328RPA19855.648ENSPNAG00000008599rpa19953.376Pygocentrus_nattereri
ENSUMAG00000009328RPA19988.907ENSRNOG00000003123Rpa19988.907Rattus_norvegicus
ENSUMAG00000009328RPA110087.825ENSRBIG00000036587RPA110087.825Rhinopithecus_bieti
ENSUMAG00000009328RPA110082.955ENSRROG00000043278RPA110082.955Rhinopithecus_roxellana
ENSUMAG00000009328RPA19731.915YAR007CRFA16838.118Saccharomyces_cerevisiae
ENSUMAG00000009328RPA19885.099ENSSBOG00000030233RPA19985.099Saimiri_boliviensis_boliviensis
ENSUMAG00000009328RPA19984.262ENSSHAG00000007969RPA19884.590Sarcophilus_harrisii
ENSUMAG00000009328RPA19965.033ENSSFOG00015005362rpa19265.033Scleropages_formosus
ENSUMAG00000009328RPA19564.318ENSSMAG00000019746RPA19951.593Scophthalmus_maximus
ENSUMAG00000009328RPA19964.216ENSSDUG00000011949rpa19964.167Seriola_dumerili
ENSUMAG00000009328RPA19565.509ENSSDUG00000016358RPA18364.626Seriola_dumerili
ENSUMAG00000009328RPA19465.197ENSSLDG00000020784RPA18264.465Seriola_lalandi_dorsalis
ENSUMAG00000009328RPA19964.379ENSSLDG00000011806rpa19964.167Seriola_lalandi_dorsalis
ENSUMAG00000009328RPA19870.248ENSSARG00000007506RPA110069.091Sorex_araneus
ENSUMAG00000009328RPA19773.277ENSSPUG00000007223RPA19973.277Sphenodon_punctatus
ENSUMAG00000009328RPA19659.304ENSSPAG00000011165RPA19759.337Stegastes_partitus
ENSUMAG00000009328RPA19962.745ENSSPAG00000009903rpa19962.684Stegastes_partitus
ENSUMAG00000009328RPA110092.650ENSSSCG00000017822RPA110092.650Sus_scrofa
ENSUMAG00000009328RPA110074.230ENSTGUG00000005775RPA19974.068Taeniopygia_guttata
ENSUMAG00000009328RPA19963.987ENSTRUG00000003616rpa19963.987Takifugu_rubripes
ENSUMAG00000009328RPA19463.785ENSTRUG00000000405RPA18260.128Takifugu_rubripes
ENSUMAG00000009328RPA19963.857ENSTNIG00000016199rpa19963.636Tetraodon_nigroviridis
ENSUMAG00000009328RPA18797.674ENSTBEG00000002709RPA18197.674Tupaia_belangeri
ENSUMAG00000009328RPA19991.694ENSTTRG00000001169RPA19991.694Tursiops_truncatus
ENSUMAG00000009328RPA188100.000ENSUAMG00000015676RPA19999.807Ursus_americanus
ENSUMAG00000009328RPA110090.422ENSVPAG00000009443RPA110090.422Vicugna_pacos
ENSUMAG00000009328RPA110096.266ENSVVUG00000021715RPA110096.266Vulpes_vulpes
ENSUMAG00000009328RPA19973.770ENSXETG00000013538rpa19973.770Xenopus_tropicalis
ENSUMAG00000009328RPA19360.107ENSXCOG00000010068rpa19560.107Xiphophorus_couchianus
ENSUMAG00000009328RPA19357.875ENSXCOG00000009899-9857.875Xiphophorus_couchianus
ENSUMAG00000009328RPA19663.492ENSXMAG00000010333RPA18363.492Xiphophorus_maculatus
ENSUMAG00000009328RPA19961.148ENSXMAG00000004102rpa19962.298Xiphophorus_maculatus

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