EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000009385 (Gene tree)
Gene ID: 103667167
Gene Symbol: PRPF8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 30865 bases
Position: chrKK498618.1:2090947-2121811
Accession: 103667167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000012872	RRM_4	PF10598.9	3.4e-48	1	1
ENSUMAP00000012872	U5_2-snRNA_bdg	PF10597.9	7.5e-74	1	1
ENSUMAP00000012872	PRO8NT	PF08082.11	1.5e-86	1	1
ENSUMAP00000012872	U6-snRNA_bdg	PF10596.9	1.8e-89	1	1
ENSUMAP00000012872	PROCN	PF08083.11	2.3e-227	1	1
ENSUMAP00000012872	PRP8_domainIV	PF12134.8	3.9e-130	1	1
ENSUMAP00000012872	PROCT	PF08084.11	1.6e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000015272	PRPF8-201	6993	XM_008695286	ENSUMAP00000012872	2330 (aa)	XP_008693508	UPI0004E0276E

Gene Model

Click here to download ENSUMAG00000009385's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000009385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000009385	PRPF8	100	99.743	ENSG00000174231	PRPF8	100	99.743	Homo_sapiens
ENSUMAG00000009385	PRPF8	100	97.563	ENSAPOG00000010079	prpf8	100	97.563	Acanthochromis_polyacanthus
ENSUMAG00000009385	PRPF8	100	99.743	ENSAMEG00000007940	PRPF8	100	99.743	Ailuropoda_melanoleuca
ENSUMAG00000009385	PRPF8	100	95.295	ENSACIG00000018280	prpf8	100	95.671	Amphilophus_citrinellus
ENSUMAG00000009385	PRPF8	100	97.563	ENSAOCG00000010725	prpf8	100	97.563	Amphiprion_ocellaris
ENSUMAG00000009385	PRPF8	100	97.563	ENSAPEG00000014397	prpf8	100	97.563	Amphiprion_percula
ENSUMAG00000009385	PRPF8	100	97.006	ENSATEG00000010062	prpf8	100	97.006	Anabas_testudineus
ENSUMAG00000009385	PRPF8	96	99.288	ENSAPLG00000010357	PRPF8	100	99.288	Anas_platyrhynchos
ENSUMAG00000009385	PRPF8	83	97.168	ENSACAG00000014784	PRPF8	99	97.168	Anolis_carolinensis
ENSUMAG00000009385	PRPF8	100	99.743	ENSANAG00000032629	PRPF8	100	99.743	Aotus_nancymaae
ENSUMAG00000009385	PRPF8	100	97.191	ENSACLG00000020858	prpf8	100	97.191	Astatotilapia_calliptera
ENSUMAG00000009385	PRPF8	100	97.474	ENSAMXG00000020291	prpf8	100	97.474	Astyanax_mexicanus
ENSUMAG00000009385	PRPF8	100	99.743	ENSBTAG00000011488	PRPF8	100	99.743	Bos_taurus
ENSUMAG00000009385	PRPF8	99	86.186	WBGene00004187	prp-8	99	86.272	Caenorhabditis_elegans
ENSUMAG00000009385	PRPF8	100	99.743	ENSCJAG00000001911	PRPF8	100	99.743	Callithrix_jacchus
ENSUMAG00000009385	PRPF8	100	99.743	ENSCAFG00000019221	PRPF8	100	99.743	Canis_familiaris
ENSUMAG00000009385	PRPF8	96	99.732	ENSCAFG00020009943	PRPF8	100	99.732	Canis_lupus_dingo
ENSUMAG00000009385	PRPF8	100	99.743	ENSCHIG00000017499	PRPF8	100	99.743	Capra_hircus
ENSUMAG00000009385	PRPF8	100	99.743	ENSTSYG00000014120	PRPF8	100	99.743	Carlito_syrichta
ENSUMAG00000009385	PRPF8	96	97.506	ENSCAPG00000009459	PRPF8	99	97.506	Cavia_aperea
ENSUMAG00000009385	PRPF8	100	99.743	ENSCPOG00000010379	PRPF8	100	99.743	Cavia_porcellus
ENSUMAG00000009385	PRPF8	100	99.743	ENSCCAG00000031983	-	100	99.743	Cebus_capucinus
ENSUMAG00000009385	PRPF8	100	99.743	ENSCATG00000038595	PRPF8	100	99.743	Cercocebus_atys
ENSUMAG00000009385	PRPF8	100	99.743	ENSCLAG00000004388	PRPF8	100	99.743	Chinchilla_lanigera
ENSUMAG00000009385	PRPF8	100	99.743	ENSCSAG00000013929	PRPF8	100	99.743	Chlorocebus_sabaeus
ENSUMAG00000009385	PRPF8	81	99.738	ENSCHOG00000008590	PRPF8	88	99.738	Choloepus_hoffmanni
ENSUMAG00000009385	PRPF8	100	99.272	ENSCPBG00000020409	PRPF8	100	99.272	Chrysemys_picta_bellii
ENSUMAG00000009385	PRPF8	98	92.162	ENSCSAVG00000007825	-	100	91.382	Ciona_savignyi
ENSUMAG00000009385	PRPF8	100	99.743	ENSCANG00000043088	PRPF8	100	99.743	Colobus_angolensis_palliatus
ENSUMAG00000009385	PRPF8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSUMAG00000009385	PRPF8	100	97.392	ENSCSEG00000007905	prpf8	100	97.392	Cynoglossus_semilaevis
ENSUMAG00000009385	PRPF8	100	97.353	ENSDARG00000026180	prpf8	100	97.353	Danio_rerio
ENSUMAG00000009385	PRPF8	93	99.678	ENSDNOG00000018471	PRPF8	99	99.678	Dasypus_novemcinctus
ENSUMAG00000009385	PRPF8	84	99.006	ENSDORG00000006185	Prpf8	96	99.006	Dipodomys_ordii
ENSUMAG00000009385	PRPF8	99	91.291	FBgn0033688	Prp8	98	90.866	Drosophila_melanogaster
ENSUMAG00000009385	PRPF8	100	94.261	ENSETEG00000017592	PRPF8	100	94.261	Echinops_telfairi
ENSUMAG00000009385	PRPF8	99	93.471	ENSEBUG00000006548	prpf8	99	93.471	Eptatretus_burgeri
ENSUMAG00000009385	PRPF8	100	99.743	ENSEASG00005009514	PRPF8	100	99.743	Equus_asinus_asinus
ENSUMAG00000009385	PRPF8	97	99.736	ENSECAG00000021318	PRPF8	100	99.736	Equus_caballus
ENSUMAG00000009385	PRPF8	67	100.000	ENSEEUG00000012120	-	67	100.000	Erinaceus_europaeus
ENSUMAG00000009385	PRPF8	98	96.285	ENSELUG00000007120	prpf8	99	96.285	Esox_lucius
ENSUMAG00000009385	PRPF8	100	99.743	ENSFCAG00000006297	PRPF8	100	99.743	Felis_catus
ENSUMAG00000009385	PRPF8	100	99.229	ENSFALG00000006628	PRPF8	100	99.229	Ficedula_albicollis
ENSUMAG00000009385	PRPF8	100	99.743	ENSFDAG00000004711	PRPF8	100	99.743	Fukomys_damarensis
ENSUMAG00000009385	PRPF8	100	97.182	ENSFHEG00000021084	prpf8	100	97.182	Fundulus_heteroclitus
ENSUMAG00000009385	PRPF8	99	95.519	ENSGMOG00000002028	prpf8	99	95.135	Gadus_morhua
ENSUMAG00000009385	PRPF8	100	99.186	ENSGALG00000002943	PRPF8	100	99.186	Gallus_gallus
ENSUMAG00000009385	PRPF8	99	97.264	ENSGAFG00000010337	prpf8	99	97.264	Gambusia_affinis
ENSUMAG00000009385	PRPF8	100	97.259	ENSGACG00000008504	prpf8	100	97.259	Gasterosteus_aculeatus
ENSUMAG00000009385	PRPF8	100	99.272	ENSGAGG00000008350	PRPF8	100	99.272	Gopherus_agassizii
ENSUMAG00000009385	PRPF8	100	99.743	ENSGGOG00000005516	PRPF8	100	99.743	Gorilla_gorilla
ENSUMAG00000009385	PRPF8	100	97.347	ENSHBUG00000016192	prpf8	100	97.347	Haplochromis_burtoni
ENSUMAG00000009385	PRPF8	100	99.743	ENSHGLG00000012029	PRPF8	100	99.743	Heterocephalus_glaber_female
ENSUMAG00000009385	PRPF8	100	99.743	ENSHGLG00100016494	PRPF8	100	99.743	Heterocephalus_glaber_male
ENSUMAG00000009385	PRPF8	100	97.307	ENSHCOG00000016414	prpf8	100	97.307	Hippocampus_comes
ENSUMAG00000009385	PRPF8	100	97.348	ENSIPUG00000023230	prpf8	100	97.348	Ictalurus_punctatus
ENSUMAG00000009385	PRPF8	100	99.743	ENSSTOG00000005128	PRPF8	100	99.743	Ictidomys_tridecemlineatus
ENSUMAG00000009385	PRPF8	100	97.559	ENSJJAG00000021159	Prpf8	100	97.559	Jaculus_jaculus
ENSUMAG00000009385	PRPF8	99	97.718	ENSKMAG00000016118	prpf8	99	97.718	Kryptolebias_marmoratus
ENSUMAG00000009385	PRPF8	100	97.221	ENSLBEG00000026903	prpf8	100	97.221	Labrus_bergylta
ENSUMAG00000009385	PRPF8	95	95.801	ENSLACG00000010479	PRPF8	99	98.261	Latimeria_chalumnae
ENSUMAG00000009385	PRPF8	99	97.474	ENSLOCG00000005409	prpf8	99	97.474	Lepisosteus_oculatus
ENSUMAG00000009385	PRPF8	100	99.743	ENSLAFG00000015445	PRPF8	100	99.743	Loxodonta_africana
ENSUMAG00000009385	PRPF8	100	99.743	ENSMFAG00000039995	PRPF8	100	99.743	Macaca_fascicularis
ENSUMAG00000009385	PRPF8	100	99.743	ENSMMUG00000004820	PRPF8	100	99.743	Macaca_mulatta
ENSUMAG00000009385	PRPF8	100	99.743	ENSMNEG00000035713	PRPF8	100	99.743	Macaca_nemestrina
ENSUMAG00000009385	PRPF8	100	99.743	ENSMLEG00000037937	PRPF8	100	99.743	Mandrillus_leucophaeus
ENSUMAG00000009385	PRPF8	100	97.519	ENSMAMG00000008919	prpf8	100	97.519	Mastacembelus_armatus
ENSUMAG00000009385	PRPF8	100	97.191	ENSMZEG00005015073	prpf8	100	97.191	Maylandia_zebra
ENSUMAG00000009385	PRPF8	100	99.186	ENSMGAG00000004769	PRPF8	100	99.186	Meleagris_gallopavo
ENSUMAG00000009385	PRPF8	100	99.700	ENSMICG00000010320	PRPF8	100	99.700	Microcebus_murinus
ENSUMAG00000009385	PRPF8	100	99.700	ENSMOCG00000016838	Prpf8	100	99.700	Microtus_ochrogaster
ENSUMAG00000009385	PRPF8	100	97.049	ENSMMOG00000011887	prpf8	100	97.049	Mola_mola
ENSUMAG00000009385	PRPF8	100	99.572	ENSMODG00000010480	PRPF8	100	99.572	Monodelphis_domestica
ENSUMAG00000009385	PRPF8	97	97.713	ENSMALG00000003558	prpf8	100	97.713	Monopterus_albus
ENSUMAG00000009385	PRPF8	100	99.657	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.657	Mus_caroli
ENSUMAG00000009385	PRPF8	100	99.657	ENSMUSG00000020850	Prpf8	100	99.657	Mus_musculus
ENSUMAG00000009385	PRPF8	100	99.572	MGP_PahariEiJ_G0017877	Prpf8	100	99.572	Mus_pahari
ENSUMAG00000009385	PRPF8	100	99.657	MGP_SPRETEiJ_G0017583	Prpf8	100	99.657	Mus_spretus
ENSUMAG00000009385	PRPF8	100	99.743	ENSMPUG00000013227	PRPF8	100	99.743	Mustela_putorius_furo
ENSUMAG00000009385	PRPF8	100	99.530	ENSMLUG00000002666	PRPF8	100	99.530	Myotis_lucifugus
ENSUMAG00000009385	PRPF8	100	97.944	ENSNGAG00000005305	Prpf8	100	97.944	Nannospalax_galili
ENSUMAG00000009385	PRPF8	100	97.234	ENSNBRG00000013127	prpf8	100	97.234	Neolamprologus_brichardi
ENSUMAG00000009385	PRPF8	97	97.695	ENSNLEG00000000897	PRPF8	98	97.695	Nomascus_leucogenys
ENSUMAG00000009385	PRPF8	99	97.784	ENSMEUG00000015999	PRPF8	100	97.784	Notamacropus_eugenii
ENSUMAG00000009385	PRPF8	100	98.201	ENSOPRG00000003102	PRPF8	100	98.201	Ochotona_princeps
ENSUMAG00000009385	PRPF8	100	99.743	ENSODEG00000008468	PRPF8	100	99.743	Octodon_degus
ENSUMAG00000009385	PRPF8	100	97.235	ENSONIG00000008153	prpf8	100	97.235	Oreochromis_niloticus
ENSUMAG00000009385	PRPF8	82	99.720	ENSOANG00000004250	PRPF8	97	99.720	Ornithorhynchus_anatinus
ENSUMAG00000009385	PRPF8	100	99.743	ENSOCUG00000000081	PRPF8	100	99.743	Oryctolagus_cuniculus
ENSUMAG00000009385	PRPF8	99	97.430	ENSORLG00000008036	prpf8	99	97.430	Oryzias_latipes
ENSUMAG00000009385	PRPF8	99	97.389	ENSORLG00020021070	prpf8	99	97.389	Oryzias_latipes_hni
ENSUMAG00000009385	PRPF8	99	97.430	ENSORLG00015002340	prpf8	99	97.430	Oryzias_latipes_hsok
ENSUMAG00000009385	PRPF8	99	95.930	ENSOMEG00000016866	prpf8	99	95.930	Oryzias_melastigma
ENSUMAG00000009385	PRPF8	100	99.615	ENSOARG00000013312	PRPF8	100	99.615	Ovis_aries
ENSUMAG00000009385	PRPF8	100	99.743	ENSPPAG00000042753	PRPF8	100	99.743	Pan_paniscus
ENSUMAG00000009385	PRPF8	100	99.743	ENSPPRG00000008746	PRPF8	100	99.743	Panthera_pardus
ENSUMAG00000009385	PRPF8	100	99.657	ENSPTIG00000019200	PRPF8	100	99.657	Panthera_tigris_altaica
ENSUMAG00000009385	PRPF8	100	99.743	ENSPTRG00000039576	PRPF8	100	99.743	Pan_troglodytes
ENSUMAG00000009385	PRPF8	99	98.799	ENSPANG00000024607	PRPF8	99	98.799	Papio_anubis
ENSUMAG00000009385	PRPF8	100	97.064	ENSPKIG00000011201	prpf8	100	97.064	Paramormyrops_kingsleyae
ENSUMAG00000009385	PRPF8	100	99.229	ENSPSIG00000013393	PRPF8	100	99.229	Pelodiscus_sinensis
ENSUMAG00000009385	PRPF8	100	99.700	ENSPEMG00000021699	Prpf8	100	99.700	Peromyscus_maniculatus_bairdii
ENSUMAG00000009385	PRPF8	96	93.586	ENSPMAG00000005438	prpf8	100	93.630	Petromyzon_marinus
ENSUMAG00000009385	PRPF8	100	99.572	ENSPCIG00000022603	PRPF8	100	99.598	Phascolarctos_cinereus
ENSUMAG00000009385	PRPF8	100	96.736	ENSPFOG00000007005	prpf8	100	96.736	Poecilia_formosa
ENSUMAG00000009385	PRPF8	100	96.481	ENSPLAG00000020777	prpf8	100	96.481	Poecilia_latipinna
ENSUMAG00000009385	PRPF8	100	96.736	ENSPMEG00000004051	prpf8	100	96.736	Poecilia_mexicana
ENSUMAG00000009385	PRPF8	100	97.388	ENSPREG00000021902	prpf8	100	97.388	Poecilia_reticulata
ENSUMAG00000009385	PRPF8	100	99.743	ENSPPYG00000007777	PRPF8	100	99.743	Pongo_abelii
ENSUMAG00000009385	PRPF8	90	99.505	ENSPCAG00000008938	PRPF8	90	99.505	Procavia_capensis
ENSUMAG00000009385	PRPF8	100	99.700	ENSPCOG00000015182	PRPF8	100	99.700	Propithecus_coquereli
ENSUMAG00000009385	PRPF8	93	100.000	ENSPVAG00000002134	PRPF8	93	100.000	Pteropus_vampyrus
ENSUMAG00000009385	PRPF8	100	97.347	ENSPNYG00000016356	prpf8	100	97.347	Pundamilia_nyererei
ENSUMAG00000009385	PRPF8	100	97.391	ENSPNAG00000009247	prpf8	100	97.391	Pygocentrus_nattereri
ENSUMAG00000009385	PRPF8	100	99.657	ENSRNOG00000003495	Prpf8	100	99.657	Rattus_norvegicus
ENSUMAG00000009385	PRPF8	100	99.743	ENSRBIG00000031219	PRPF8	100	99.743	Rhinopithecus_bieti
ENSUMAG00000009385	PRPF8	100	99.743	ENSRROG00000038014	PRPF8	100	99.743	Rhinopithecus_roxellana
ENSUMAG00000009385	PRPF8	99	62.258	YHR165C	PRP8	95	62.301	Saccharomyces_cerevisiae
ENSUMAG00000009385	PRPF8	100	99.743	ENSSBOG00000029717	PRPF8	100	99.743	Saimiri_boliviensis_boliviensis
ENSUMAG00000009385	PRPF8	100	99.529	ENSSHAG00000006167	PRPF8	100	99.529	Sarcophilus_harrisii
ENSUMAG00000009385	PRPF8	100	97.267	ENSSFOG00015013905	prpf8	100	97.267	Scleropages_formosus
ENSUMAG00000009385	PRPF8	100	97.138	ENSSMAG00000017736	prpf8	100	97.138	Scophthalmus_maximus
ENSUMAG00000009385	PRPF8	100	97.519	ENSSDUG00000003029	prpf8	100	97.519	Seriola_dumerili
ENSUMAG00000009385	PRPF8	69	98.936	ENSSLDG00000017096	prpf8	100	98.936	Seriola_lalandi_dorsalis
ENSUMAG00000009385	PRPF8	87	98.487	ENSSARG00000002892	PRPF8	87	98.487	Sorex_araneus
ENSUMAG00000009385	PRPF8	100	99.058	ENSSPUG00000007463	PRPF8	100	99.058	Sphenodon_punctatus
ENSUMAG00000009385	PRPF8	100	96.965	ENSSPAG00000015639	prpf8	100	96.965	Stegastes_partitus
ENSUMAG00000009385	PRPF8	100	99.743	ENSSSCG00000017817	PRPF8	100	99.743	Sus_scrofa
ENSUMAG00000009385	PRPF8	100	99.229	ENSTGUG00000005648	-	100	99.229	Taeniopygia_guttata
ENSUMAG00000009385	PRPF8	52	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSUMAG00000009385	PRPF8	100	97.307	ENSTRUG00000015906	prpf8	100	97.307	Takifugu_rubripes
ENSUMAG00000009385	PRPF8	95	98.746	ENSTNIG00000003460	prpf8	99	98.746	Tetraodon_nigroviridis
ENSUMAG00000009385	PRPF8	93	99.523	ENSTBEG00000006431	PRPF8	93	99.523	Tupaia_belangeri
ENSUMAG00000009385	PRPF8	100	99.143	ENSTTRG00000006869	PRPF8	100	99.143	Tursiops_truncatus
ENSUMAG00000009385	PRPF8	54	99.444	ENSUAMG00000015644	-	96	99.444	Ursus_americanus
ENSUMAG00000009385	PRPF8	71	99.505	ENSVPAG00000006063	-	71	99.505	Vicugna_pacos
ENSUMAG00000009385	PRPF8	100	99.743	ENSVVUG00000021695	PRPF8	99	99.743	Vulpes_vulpes
ENSUMAG00000009385	PRPF8	100	98.459	ENSXETG00000022259	prpf8	100	98.459	Xenopus_tropicalis
ENSUMAG00000009385	PRPF8	100	97.310	ENSXCOG00000012775	prpf8	100	97.310	Xiphophorus_couchianus
ENSUMAG00000009385	PRPF8	100	97.267	ENSXMAG00000008505	prpf8	100	97.267	Xiphophorus_maculatus