EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000009666 (Gene tree)
Gene ID: 103674570
Gene Symbol: DDX56
Alias: -
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 7613 bases
Position: chrKK498685.1:8740776-8748388
Accession: 103674570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000013077	ResIII	PF04851.15	1.1e-06	1	1
ENSUMAP00000013085	ResIII	PF04851.15	1.6e-06	1	1
ENSUMAP00000013077	DEAD	PF00270.29	3.6e-39	1	1
ENSUMAP00000013085	DEAD	PF00270.29	5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000015511	DDX56-201	2638	-	ENSUMAP00000013077	545 (aa)	XP_008701707	UPI0004DFCE7B
ENSUMAT00000015518	DDX56-202	1944	XM_008703484	ENSUMAP00000013085	647 (aa)	XP_008701706	UPI0004E01F1E

Gene Model

Click here to download ENSUMAG00000009666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000009666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000009666	DDX56	70	30.612	ENSUMAG00000013505	DDX18	54	30.380
ENSUMAG00000009666	DDX56	72	30.435	ENSUMAG00000010245	DDX54	50	30.435
ENSUMAG00000009666	DDX56	74	32.426	ENSUMAG00000002358	DDX47	80	32.506
ENSUMAG00000009666	DDX56	72	30.846	ENSUMAG00000006489	DDX49	78	30.846
ENSUMAG00000009666	DDX56	67	50.000	ENSUMAG00000023450	DDX1	54	50.000
ENSUMAG00000009666	DDX56	73	32.746	ENSUMAG00000024473	DDX27	52	31.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000009666	DDX56	100	91.590	ENSG00000136271	DDX56	100	93.867	Homo_sapiens
ENSUMAG00000009666	DDX56	98	63.538	ENSAPOG00000017113	ddx56	98	63.718	Acanthochromis_polyacanthus
ENSUMAG00000009666	DDX56	100	98.899	ENSAMEG00000017711	DDX56	100	98.899	Ailuropoda_melanoleuca
ENSUMAG00000009666	DDX56	92	59.566	ENSACIG00000013747	ddx56	98	66.851	Amphilophus_citrinellus
ENSUMAG00000009666	DDX56	95	64.259	ENSAOCG00000018059	ddx56	95	65.753	Amphiprion_ocellaris
ENSUMAG00000009666	DDX56	88	66.530	ENSAOCG00000015447	-	87	66.530	Amphiprion_ocellaris
ENSUMAG00000009666	DDX56	97	63.803	ENSAPEG00000007267	ddx56	97	63.620	Amphiprion_percula
ENSUMAG00000009666	DDX56	98	63.587	ENSATEG00000005279	ddx56	97	63.736	Anabas_testudineus
ENSUMAG00000009666	DDX56	98	63.291	ENSACLG00000020113	ddx56	91	67.451	Astatotilapia_calliptera
ENSUMAG00000009666	DDX56	99	60.963	ENSAMXG00000019357	ddx56	99	60.784	Astyanax_mexicanus
ENSUMAG00000009666	DDX56	100	91.941	ENSBTAG00000010602	DDX56	100	92.125	Bos_taurus
ENSUMAG00000009666	DDX56	97	41.166	WBGene00016073	C24H12.4	81	42.205	Caenorhabditis_elegans
ENSUMAG00000009666	DDX56	100	90.676	ENSCJAG00000012233	DDX56	100	90.676	Callithrix_jacchus
ENSUMAG00000009666	DDX56	82	95.506	ENSCAFG00000029295	DDX56	100	95.506	Canis_familiaris
ENSUMAG00000009666	DDX56	100	91.560	ENSCAFG00020019695	DDX56	100	91.743	Canis_lupus_dingo
ENSUMAG00000009666	DDX56	100	91.209	ENSCHIG00000014261	DDX56	100	91.209	Capra_hircus
ENSUMAG00000009666	DDX56	100	91.408	ENSTSYG00000008048	DDX56	100	91.956	Carlito_syrichta
ENSUMAG00000009666	DDX56	86	87.315	ENSCAPG00000006286	DDX56	100	87.104	Cavia_aperea
ENSUMAG00000009666	DDX56	100	88.300	ENSCPOG00000003359	DDX56	100	88.117	Cavia_porcellus
ENSUMAG00000009666	DDX56	100	89.580	ENSCCAG00000025303	DDX56	100	90.311	Cebus_capucinus
ENSUMAG00000009666	DDX56	100	91.758	ENSCATG00000039389	DDX56	100	91.758	Cercocebus_atys
ENSUMAG00000009666	DDX56	100	89.744	ENSCLAG00000007666	DDX56	100	89.744	Chinchilla_lanigera
ENSUMAG00000009666	DDX56	100	91.590	ENSCSAG00000015636	DDX56	100	91.590	Chlorocebus_sabaeus
ENSUMAG00000009666	DDX56	99	69.273	ENSCPBG00000024556	DDX56	97	68.934	Chrysemys_picta_bellii
ENSUMAG00000009666	DDX56	92	56.556	ENSCING00000005185	-	99	56.751	Ciona_intestinalis
ENSUMAG00000009666	DDX56	91	54.851	ENSCSAVG00000011266	-	99	54.851	Ciona_savignyi
ENSUMAG00000009666	DDX56	100	91.042	ENSCANG00000028187	DDX56	100	91.042	Colobus_angolensis_palliatus
ENSUMAG00000009666	DDX56	100	88.645	ENSCGRG00001019019	Ddx56	100	88.645	Cricetulus_griseus_chok1gshd
ENSUMAG00000009666	DDX56	100	88.645	ENSCGRG00000011870	Ddx56	100	88.645	Cricetulus_griseus_crigri
ENSUMAG00000009666	DDX56	98	64.273	ENSCSEG00000008368	ddx56	98	64.273	Cynoglossus_semilaevis
ENSUMAG00000009666	DDX56	98	64.428	ENSCVAG00000006499	ddx56	93	65.193	Cyprinodon_variegatus
ENSUMAG00000009666	DDX56	98	63.455	ENSDARG00000020913	ddx56	98	63.818	Danio_rerio
ENSUMAG00000009666	DDX56	86	89.831	ENSDNOG00000036526	DDX56	99	89.831	Dasypus_novemcinctus
ENSUMAG00000009666	DDX56	92	50.000	FBgn0001565	Hlc	93	48.491	Drosophila_melanogaster
ENSUMAG00000009666	DDX56	83	77.833	ENSETEG00000002969	-	74	77.833	Echinops_telfairi
ENSUMAG00000009666	DDX56	87	60.842	ENSETEG00000019559	-	100	60.000	Echinops_telfairi
ENSUMAG00000009666	DDX56	97	58.577	ENSEBUG00000009986	ddx56	93	60.769	Eptatretus_burgeri
ENSUMAG00000009666	DDX56	100	92.491	ENSEASG00005017795	DDX56	100	93.223	Equus_asinus_asinus
ENSUMAG00000009666	DDX56	100	92.308	ENSECAG00000019897	DDX56	100	93.040	Equus_caballus
ENSUMAG00000009666	DDX56	86	91.314	ENSEEUG00000004849	DDX56	100	91.314	Erinaceus_europaeus
ENSUMAG00000009666	DDX56	97	65.683	ENSELUG00000004150	ddx56	97	65.683	Esox_lucius
ENSUMAG00000009666	DDX56	99	94.669	ENSFCAG00000010261	DDX56	99	94.669	Felis_catus
ENSUMAG00000009666	DDX56	100	89.194	ENSFDAG00000007128	DDX56	100	88.645	Fukomys_damarensis
ENSUMAG00000009666	DDX56	98	64.140	ENSFHEG00000018008	ddx56	95	68.081	Fundulus_heteroclitus
ENSUMAG00000009666	DDX56	97	61.781	ENSGAFG00000006906	ddx56	97	61.781	Gambusia_affinis
ENSUMAG00000009666	DDX56	93	72.461	ENSGAGG00000006789	DDX56	89	73.200	Gopherus_agassizii
ENSUMAG00000009666	DDX56	100	91.590	ENSGGOG00000012031	DDX56	100	91.590	Gorilla_gorilla
ENSUMAG00000009666	DDX56	92	62.353	ENSHBUG00000015246	ddx56	91	62.745	Haplochromis_burtoni
ENSUMAG00000009666	DDX56	100	90.110	ENSHGLG00000017271	DDX56	100	89.927	Heterocephalus_glaber_female
ENSUMAG00000009666	DDX56	100	90.110	ENSHGLG00100015731	DDX56	100	89.927	Heterocephalus_glaber_male
ENSUMAG00000009666	DDX56	97	64.207	ENSHCOG00000001685	ddx56	98	63.469	Hippocampus_comes
ENSUMAG00000009666	DDX56	98	61.802	ENSIPUG00000006602	ddx56	97	61.802	Ictalurus_punctatus
ENSUMAG00000009666	DDX56	100	90.476	ENSSTOG00000000464	DDX56	100	90.476	Ictidomys_tridecemlineatus
ENSUMAG00000009666	DDX56	99	87.638	ENSJJAG00000014269	Ddx56	100	87.638	Jaculus_jaculus
ENSUMAG00000009666	DDX56	97	64.168	ENSKMAG00000016611	ddx56	95	67.265	Kryptolebias_marmoratus
ENSUMAG00000009666	DDX56	98	63.483	ENSLBEG00000026281	ddx56	98	63.359	Labrus_bergylta
ENSUMAG00000009666	DDX56	98	65.872	ENSLACG00000015551	DDX56	97	65.642	Latimeria_chalumnae
ENSUMAG00000009666	DDX56	97	64.909	ENSLOCG00000015185	ddx56	90	68.102	Lepisosteus_oculatus
ENSUMAG00000009666	DDX56	99	90.424	ENSLAFG00000018206	DDX56	99	90.239	Loxodonta_africana
ENSUMAG00000009666	DDX56	100	91.575	ENSMFAG00000041001	DDX56	100	91.575	Macaca_fascicularis
ENSUMAG00000009666	DDX56	100	91.392	ENSMMUG00000002645	DDX56	100	91.392	Macaca_mulatta
ENSUMAG00000009666	DDX56	100	91.758	ENSMNEG00000028492	DDX56	100	91.758	Macaca_nemestrina
ENSUMAG00000009666	DDX56	100	92.125	ENSMLEG00000043591	DDX56	100	92.125	Mandrillus_leucophaeus
ENSUMAG00000009666	DDX56	97	64.299	ENSMAMG00000007776	ddx56	98	64.663	Mastacembelus_armatus
ENSUMAG00000009666	DDX56	98	63.291	ENSMZEG00005009813	ddx56	91	67.451	Maylandia_zebra
ENSUMAG00000009666	DDX56	100	90.859	ENSMICG00000005550	DDX56	100	90.494	Microcebus_murinus
ENSUMAG00000009666	DDX56	100	88.645	ENSMOCG00000016782	Ddx56	100	88.645	Microtus_ochrogaster
ENSUMAG00000009666	DDX56	94	65.577	ENSMMOG00000009654	ddx56	97	66.538	Mola_mola
ENSUMAG00000009666	DDX56	100	75.410	ENSMODG00000016137	DDX56	99	75.458	Monodelphis_domestica
ENSUMAG00000009666	DDX56	68	64.879	ENSMALG00000016910	ddx56	99	64.879	Monopterus_albus
ENSUMAG00000009666	DDX56	100	87.729	MGP_CAROLIEiJ_G0016069	Ddx56	100	87.729	Mus_caroli
ENSUMAG00000009666	DDX56	100	87.363	ENSMUSG00000004393	Ddx56	100	87.363	Mus_musculus
ENSUMAG00000009666	DDX56	100	87.912	MGP_PahariEiJ_G0016822	Ddx56	100	87.912	Mus_pahari
ENSUMAG00000009666	DDX56	100	87.363	MGP_SPRETEiJ_G0016911	Ddx56	100	87.363	Mus_spretus
ENSUMAG00000009666	DDX56	100	96.881	ENSMPUG00000018196	DDX56	88	96.881	Mustela_putorius_furo
ENSUMAG00000009666	DDX56	100	92.477	ENSMLUG00000003509	DDX56	100	92.477	Myotis_lucifugus
ENSUMAG00000009666	DDX56	100	89.560	ENSNGAG00000018785	Ddx56	100	89.377	Nannospalax_galili
ENSUMAG00000009666	DDX56	92	64.215	ENSNBRG00000002656	ddx56	91	64.215	Neolamprologus_brichardi
ENSUMAG00000009666	DDX56	100	91.773	ENSNLEG00000003816	DDX56	100	91.773	Nomascus_leucogenys
ENSUMAG00000009666	DDX56	91	78.024	ENSMEUG00000006788	DDX56	100	78.024	Notamacropus_eugenii
ENSUMAG00000009666	DDX56	100	86.654	ENSOPRG00000000292	-	100	85.740	Ochotona_princeps
ENSUMAG00000009666	DDX56	69	93.067	ENSODEG00000014807	DDX56	100	93.067	Octodon_degus
ENSUMAG00000009666	DDX56	98	65.794	ENSONIG00000011509	ddx56	97	66.163	Oreochromis_niloticus
ENSUMAG00000009666	DDX56	74	69.825	ENSOANG00000015987	-	95	69.479	Ornithorhynchus_anatinus
ENSUMAG00000009666	DDX56	97	64.148	ENSOANG00000006320	-	100	65.062	Ornithorhynchus_anatinus
ENSUMAG00000009666	DDX56	100	86.472	ENSOCUG00000022918	DDX56	100	87.569	Oryctolagus_cuniculus
ENSUMAG00000009666	DDX56	98	65.336	ENSORLG00000001434	ddx56	98	64.791	Oryzias_latipes
ENSUMAG00000009666	DDX56	98	65.399	ENSORLG00020015718	ddx56	95	64.855	Oryzias_latipes_hni
ENSUMAG00000009666	DDX56	98	65.336	ENSORLG00015003004	ddx56	94	64.791	Oryzias_latipes_hsok
ENSUMAG00000009666	DDX56	98	65.154	ENSOMEG00000022072	ddx56	98	64.791	Oryzias_melastigma
ENSUMAG00000009666	DDX56	100	90.128	ENSOGAG00000009981	DDX56	100	90.128	Otolemur_garnettii
ENSUMAG00000009666	DDX56	100	91.392	ENSOARG00000015240	DDX56	100	91.392	Ovis_aries
ENSUMAG00000009666	DDX56	100	87.410	ENSPPAG00000029147	DDX56	100	87.410	Pan_paniscus
ENSUMAG00000009666	DDX56	100	73.406	ENSPPAG00000031263	-	100	72.495	Pan_paniscus
ENSUMAG00000009666	DDX56	99	92.491	ENSPPRG00000014594	DDX56	99	92.491	Panthera_pardus
ENSUMAG00000009666	DDX56	86	92.340	ENSPTIG00000019500	DDX56	92	92.340	Panthera_tigris_altaica
ENSUMAG00000009666	DDX56	94	74.903	ENSPTRG00000052765	-	100	74.710	Pan_troglodytes
ENSUMAG00000009666	DDX56	100	91.225	ENSPTRG00000019147	DDX56	100	91.225	Pan_troglodytes
ENSUMAG00000009666	DDX56	100	91.758	ENSPANG00000002446	DDX56	100	91.758	Papio_anubis
ENSUMAG00000009666	DDX56	97	65.498	ENSPKIG00000018998	ddx56	90	67.787	Paramormyrops_kingsleyae
ENSUMAG00000009666	DDX56	94	65.835	ENSPMGG00000017421	ddx56	94	66.732	Periophthalmus_magnuspinnatus
ENSUMAG00000009666	DDX56	100	83.971	ENSPCIG00000009336	DDX56	99	83.971	Phascolarctos_cinereus
ENSUMAG00000009666	DDX56	97	63.437	ENSPFOG00000018658	ddx56	91	67.126	Poecilia_formosa
ENSUMAG00000009666	DDX56	97	63.653	ENSPLAG00000019208	ddx56	97	63.842	Poecilia_latipinna
ENSUMAG00000009666	DDX56	97	63.437	ENSPMEG00000001775	ddx56	97	63.993	Poecilia_mexicana
ENSUMAG00000009666	DDX56	97	64.007	ENSPREG00000015142	ddx56	97	63.822	Poecilia_reticulata
ENSUMAG00000009666	DDX56	100	91.773	ENSPPYG00000017591	DDX56	100	91.773	Pongo_abelii
ENSUMAG00000009666	DDX56	96	88.235	ENSPCAG00000011499	DDX56	100	87.856	Procavia_capensis
ENSUMAG00000009666	DDX56	100	91.225	ENSPCOG00000024864	DDX56	100	91.042	Propithecus_coquereli
ENSUMAG00000009666	DDX56	88	93.488	ENSPVAG00000000791	DDX56	88	93.488	Pteropus_vampyrus
ENSUMAG00000009666	DDX56	98	63.472	ENSPNYG00000019212	ddx56	91	67.647	Pundamilia_nyererei
ENSUMAG00000009666	DDX56	98	63.687	ENSPNAG00000025446	ddx56	99	63.687	Pygocentrus_nattereri
ENSUMAG00000009666	DDX56	100	88.095	ENSRNOG00000004670	Ddx56	100	88.095	Rattus_norvegicus
ENSUMAG00000009666	DDX56	100	91.590	ENSRBIG00000030140	DDX56	100	91.590	Rhinopithecus_bieti
ENSUMAG00000009666	DDX56	100	91.225	ENSRROG00000044428	DDX56	100	91.225	Rhinopithecus_roxellana
ENSUMAG00000009666	DDX56	97	41.409	YLR276C	-	91	42.541	Saccharomyces_cerevisiae
ENSUMAG00000009666	DDX56	100	90.494	ENSSBOG00000034339	DDX56	100	90.494	Saimiri_boliviensis_boliviensis
ENSUMAG00000009666	DDX56	86	82.415	ENSSHAG00000016615	DDX56	99	82.415	Sarcophilus_harrisii
ENSUMAG00000009666	DDX56	97	66.421	ENSSFOG00015012795	ddx56	96	65.683	Scleropages_formosus
ENSUMAG00000009666	DDX56	99	62.857	ENSSMAG00000011280	ddx56	99	62.100	Scophthalmus_maximus
ENSUMAG00000009666	DDX56	99	63.506	ENSSDUG00000023597	ddx56	99	64.222	Seriola_dumerili
ENSUMAG00000009666	DDX56	99	63.506	ENSSLDG00000018369	ddx56	99	64.222	Seriola_lalandi_dorsalis
ENSUMAG00000009666	DDX56	75	89.943	ENSSARG00000014363	DDX56	80	88.333	Sorex_araneus
ENSUMAG00000009666	DDX56	98	68.762	ENSSPUG00000000784	DDX56	95	68.207	Sphenodon_punctatus
ENSUMAG00000009666	DDX56	92	67.123	ENSSPAG00000009392	ddx56	94	67.710	Stegastes_partitus
ENSUMAG00000009666	DDX56	99	92.066	ENSSSCG00000016745	DDX56	99	92.066	Sus_scrofa
ENSUMAG00000009666	DDX56	98	64.673	ENSTRUG00000018623	ddx56	98	64.673	Takifugu_rubripes
ENSUMAG00000009666	DDX56	98	62.032	ENSTNIG00000013593	ddx56	91	65.504	Tetraodon_nigroviridis
ENSUMAG00000009666	DDX56	100	89.927	ENSTBEG00000007119	DDX56	100	89.744	Tupaia_belangeri
ENSUMAG00000009666	DDX56	86	90.678	ENSTTRG00000010552	DDX56	100	91.314	Tursiops_truncatus
ENSUMAG00000009666	DDX56	100	100.000	ENSUAMG00000014194	DDX56	100	100.000	Ursus_americanus
ENSUMAG00000009666	DDX56	100	95.596	ENSVVUG00000011905	DDX56	100	95.596	Vulpes_vulpes
ENSUMAG00000009666	DDX56	98	66.062	ENSXETG00000019000	ddx56	99	66.606	Xenopus_tropicalis
ENSUMAG00000009666	DDX56	97	63.465	ENSXCOG00000017413	ddx56	97	63.465	Xiphophorus_couchianus
ENSUMAG00000009666	DDX56	97	63.736	ENSXMAG00000018749	ddx56	97	63.246	Xiphophorus_maculatus