EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000009733 (Gene tree)
Gene ID: 103678394
Gene Symbol: CHD1L
Alias: ALC1
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 74489 bases
Position: chrKK498750.1:156207-230695
Accession: 103678394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000013499	ResIII	PF04851.15	2.4e-12	1	1
ENSUMAP00000013497	ResIII	PF04851.15	3.3e-12	1	1
ENSUMAP00000013572	ResIII	PF04851.15	4.8e-12	1	1
ENSUMAP00000013532	ResIII	PF04851.15	5e-12	1	1
ENSUMAP00000013481	ResIII	PF04851.15	5.9e-12	1	1
ENSUMAP00000013578	ResIII	PF04851.15	6.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000016008	CHD1L-201	2670	-	ENSUMAP00000013481	889 (aa)	-	-
ENSUMAT00000016063	CHD1L-204	2652	-	ENSUMAP00000013532	883 (aa)	-	-
ENSUMAT00000016029	CHD1L-203	1122	-	ENSUMAP00000013499	373 (aa)	-	-
ENSUMAT00000016114	CHD1L-206	2706	-	ENSUMAP00000013578	901 (aa)	-	-
ENSUMAT00000016025	CHD1L-202	2706	XM_008707731	ENSUMAP00000013497	901 (aa)	XP_008705953	-
ENSUMAT00000016139	CHD1L-207	2637	-	ENSUMAP00000013601	878 (aa)	-	-
ENSUMAT00000016152	CHD1L-208	2376	-	ENSUMAP00000013614	791 (aa)	-	-
ENSUMAT00000016108	CHD1L-205	2586	-	ENSUMAP00000013572	861 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000009733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000009733's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000009733	CHD1L	76	37.584	ENSUMAG00000004549	SMARCAD1	51	35.728
ENSUMAG00000009733	CHD1L	83	39.528	ENSUMAG00000002017	CHD6	71	40.458
ENSUMAG00000009733	CHD1L	84	35.248	ENSUMAG00000004748	HELLS	78	40.110
ENSUMAG00000009733	CHD1L	54	30.682	ENSUMAG00000016401	-	56	30.224
ENSUMAG00000009733	CHD1L	88	42.090	ENSUMAG00000004073	SMARCA1	75	44.099
ENSUMAG00000009733	CHD1L	85	45.312	ENSUMAG00000015324	SMARCA5	55	42.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000009733	CHD1L	99	89.706	ENSG00000131778	CHD1L	100	89.037	Homo_sapiens
ENSUMAG00000009733	CHD1L	96	65.509	ENSAPOG00000001539	chd1l	99	64.310	Acanthochromis_polyacanthus
ENSUMAG00000009733	CHD1L	100	97.780	ENSAMEG00000017063	CHD1L	100	97.780	Ailuropoda_melanoleuca
ENSUMAG00000009733	CHD1L	96	65.444	ENSACIG00000001164	chd1l	97	65.698	Amphilophus_citrinellus
ENSUMAG00000009733	CHD1L	98	63.719	ENSAOCG00000014510	chd1l	87	64.108	Amphiprion_ocellaris
ENSUMAG00000009733	CHD1L	98	61.547	ENSAPEG00000017573	chd1l	96	61.905	Amphiprion_percula
ENSUMAG00000009733	CHD1L	97	61.647	ENSAPEG00000017450	chd1l	97	61.443	Amphiprion_percula
ENSUMAG00000009733	CHD1L	96	66.826	ENSATEG00000013058	chd1l	93	65.741	Anabas_testudineus
ENSUMAG00000009733	CHD1L	98	72.398	ENSAPLG00000009976	CHD1L	99	72.303	Anas_platyrhynchos
ENSUMAG00000009733	CHD1L	96	69.789	ENSACAG00000017686	CHD1L	98	68.309	Anolis_carolinensis
ENSUMAG00000009733	CHD1L	98	89.302	ENSANAG00000024347	CHD1L	99	88.790	Aotus_nancymaae
ENSUMAG00000009733	CHD1L	96	65.554	ENSACLG00000019304	chd1l	97	64.221	Astatotilapia_calliptera
ENSUMAG00000009733	CHD1L	97	59.148	ENSAMXG00000012367	chd1l	86	59.148	Astyanax_mexicanus
ENSUMAG00000009733	CHD1L	99	89.955	ENSBTAG00000020831	CHD1L	99	89.888	Bos_taurus
ENSUMAG00000009733	CHD1L	98	89.128	ENSCJAG00000002406	CHD1L	99	88.654	Callithrix_jacchus
ENSUMAG00000009733	CHD1L	99	89.955	ENSCAFG00000010944	CHD1L	99	89.955	Canis_familiaris
ENSUMAG00000009733	CHD1L	98	91.348	ENSCAFG00020020121	CHD1L	99	91.377	Canis_lupus_dingo
ENSUMAG00000009733	CHD1L	99	88.876	ENSCHIG00000013871	CHD1L	99	88.876	Capra_hircus
ENSUMAG00000009733	CHD1L	94	90.833	ENSTSYG00000003005	CHD1L	100	90.304	Carlito_syrichta
ENSUMAG00000009733	CHD1L	98	85.407	ENSCPOG00000009000	CHD1L	99	85.347	Cavia_porcellus
ENSUMAG00000009733	CHD1L	98	85.892	ENSCCAG00000036079	CHD1L	99	85.428	Cebus_capucinus
ENSUMAG00000009733	CHD1L	98	90.102	ENSCATG00000031044	CHD1L	100	89.258	Cercocebus_atys
ENSUMAG00000009733	CHD1L	98	87.358	ENSCLAG00000000880	CHD1L	99	87.472	Chinchilla_lanigera
ENSUMAG00000009733	CHD1L	98	89.989	ENSCSAG00000018386	CHD1L	100	89.037	Chlorocebus_sabaeus
ENSUMAG00000009733	CHD1L	96	76.859	ENSCPBG00000002600	CHD1L	99	74.887	Chrysemys_picta_bellii
ENSUMAG00000009733	CHD1L	99	88.348	ENSCANG00000020239	CHD1L	100	87.708	Colobus_angolensis_palliatus
ENSUMAG00000009733	CHD1L	98	85.097	ENSCGRG00001021624	Chd1l	99	84.400	Cricetulus_griseus_chok1gshd
ENSUMAG00000009733	CHD1L	95	85.439	ENSCGRG00000007554	Chd1l	98	86.386	Cricetulus_griseus_crigri
ENSUMAG00000009733	CHD1L	83	58.521	ENSCSEG00000007030	-	92	57.057	Cynoglossus_semilaevis
ENSUMAG00000009733	CHD1L	97	63.529	ENSCVAG00000002595	chd1l	91	62.372	Cyprinodon_variegatus
ENSUMAG00000009733	CHD1L	97	65.826	ENSDARG00000015471	chd1l	85	65.826	Danio_rerio
ENSUMAG00000009733	CHD1L	99	87.946	ENSDNOG00000019504	CHD1L	100	87.805	Dasypus_novemcinctus
ENSUMAG00000009733	CHD1L	98	81.096	ENSDORG00000013555	Chd1l	99	81.159	Dipodomys_ordii
ENSUMAG00000009733	CHD1L	89	81.038	ENSETEG00000008445	CHD1L	90	81.139	Echinops_telfairi
ENSUMAG00000009733	CHD1L	65	76.596	ENSEBUG00000005791	chd1l	77	76.596	Eptatretus_burgeri
ENSUMAG00000009733	CHD1L	99	89.551	ENSEASG00005007364	CHD1L	99	90.633	Equus_asinus_asinus
ENSUMAG00000009733	CHD1L	99	89.551	ENSECAG00000008915	CHD1L	99	90.633	Equus_caballus
ENSUMAG00000009733	CHD1L	98	54.700	ENSELUG00000016844	chd1l	85	54.392	Esox_lucius
ENSUMAG00000009733	CHD1L	99	92.768	ENSFCAG00000007777	CHD1L	100	92.248	Felis_catus
ENSUMAG00000009733	CHD1L	99	71.460	ENSFALG00000006087	CHD1L	99	71.795	Ficedula_albicollis
ENSUMAG00000009733	CHD1L	96	87.799	ENSFDAG00000012431	CHD1L	100	88.009	Fukomys_damarensis
ENSUMAG00000009733	CHD1L	97	63.303	ENSFHEG00000012420	chd1l	87	63.170	Fundulus_heteroclitus
ENSUMAG00000009733	CHD1L	84	65.064	ENSGMOG00000005076	CHD1L	100	65.318	Gadus_morhua
ENSUMAG00000009733	CHD1L	96	72.902	ENSGALG00000015038	CHD1L	98	71.833	Gallus_gallus
ENSUMAG00000009733	CHD1L	96	65.053	ENSGAFG00000018198	chd1l	96	63.209	Gambusia_affinis
ENSUMAG00000009733	CHD1L	84	63.462	ENSGACG00000014042	chd1l	98	65.692	Gasterosteus_aculeatus
ENSUMAG00000009733	CHD1L	96	77.218	ENSGAGG00000014432	CHD1L	98	76.196	Gopherus_agassizii
ENSUMAG00000009733	CHD1L	99	89.253	ENSGGOG00000001067	CHD1L	100	88.372	Gorilla_gorilla
ENSUMAG00000009733	CHD1L	98	64.228	ENSHBUG00000007464	chd1l	98	63.820	Haplochromis_burtoni
ENSUMAG00000009733	CHD1L	97	85.502	ENSHGLG00000008933	CHD1L	99	84.821	Heterocephalus_glaber_female
ENSUMAG00000009733	CHD1L	95	83.990	ENSHGLG00100007155	CHD1L	100	84.859	Heterocephalus_glaber_male
ENSUMAG00000009733	CHD1L	96	62.322	ENSHCOG00000012787	chd1l	94	62.077	Hippocampus_comes
ENSUMAG00000009733	CHD1L	98	60.113	ENSIPUG00000022617	chd1l	87	59.347	Ictalurus_punctatus
ENSUMAG00000009733	CHD1L	99	79.106	ENSSTOG00000007032	CHD1L	99	79.106	Ictidomys_tridecemlineatus
ENSUMAG00000009733	CHD1L	98	62.992	ENSKMAG00000014358	chd1l	87	63.667	Kryptolebias_marmoratus
ENSUMAG00000009733	CHD1L	97	63.254	ENSLBEG00000023845	chd1l	99	63.033	Labrus_bergylta
ENSUMAG00000009733	CHD1L	96	66.154	ENSLACG00000006262	CHD1L	86	66.325	Latimeria_chalumnae
ENSUMAG00000009733	CHD1L	97	69.231	ENSLOCG00000010574	chd1l	87	68.828	Lepisosteus_oculatus
ENSUMAG00000009733	CHD1L	96	88.033	ENSLAFG00000018136	CHD1L	99	88.605	Loxodonta_africana
ENSUMAG00000009733	CHD1L	97	87.886	ENSMFAG00000043562	CHD1L	100	90.073	Macaca_fascicularis
ENSUMAG00000009733	CHD1L	98	89.989	ENSMMUG00000009024	CHD1L	100	89.147	Macaca_mulatta
ENSUMAG00000009733	CHD1L	98	89.875	ENSMNEG00000039905	CHD1L	100	89.037	Macaca_nemestrina
ENSUMAG00000009733	CHD1L	98	90.102	ENSMLEG00000030900	CHD1L	100	89.258	Mandrillus_leucophaeus
ENSUMAG00000009733	CHD1L	96	64.678	ENSMAMG00000012822	chd1l	98	62.121	Mastacembelus_armatus
ENSUMAG00000009733	CHD1L	96	65.554	ENSMZEG00005020830	chd1l	88	64.586	Maylandia_zebra
ENSUMAG00000009733	CHD1L	96	72.129	ENSMGAG00000014304	CHD1L	99	72.887	Meleagris_gallopavo
ENSUMAG00000009733	CHD1L	97	82.597	ENSMAUG00000004712	-	97	84.463	Mesocricetus_auratus
ENSUMAG00000009733	CHD1L	99	90.214	ENSMICG00000002497	CHD1L	99	90.214	Microcebus_murinus
ENSUMAG00000009733	CHD1L	99	84.761	ENSMOCG00000006305	Chd1l	99	84.761	Microtus_ochrogaster
ENSUMAG00000009733	CHD1L	96	62.065	ENSMMOG00000005964	chd1l	93	59.441	Mola_mola
ENSUMAG00000009733	CHD1L	98	79.864	ENSMODG00000018717	CHD1L	99	80.204	Monodelphis_domestica
ENSUMAG00000009733	CHD1L	97	63.356	ENSMALG00000014675	chd1l	86	63.813	Monopterus_albus
ENSUMAG00000009733	CHD1L	99	83.969	MGP_CAROLIEiJ_G0025401	Chd1l	99	83.969	Mus_caroli
ENSUMAG00000009733	CHD1L	99	83.055	ENSMUSG00000028089	Chd1l	99	83.389	Mus_musculus
ENSUMAG00000009733	CHD1L	99	84.529	MGP_PahariEiJ_G0026845	Chd1l	99	84.529	Mus_pahari
ENSUMAG00000009733	CHD1L	99	84.364	MGP_SPRETEiJ_G0026347	Chd1l	99	84.364	Mus_spretus
ENSUMAG00000009733	CHD1L	100	93.230	ENSMPUG00000000615	CHD1L	100	93.341	Mustela_putorius_furo
ENSUMAG00000009733	CHD1L	99	86.547	ENSMLUG00000007573	CHD1L	99	86.298	Myotis_lucifugus
ENSUMAG00000009733	CHD1L	96	81.257	ENSNGAG00000000908	Chd1l	99	81.029	Nannospalax_galili
ENSUMAG00000009733	CHD1L	96	62.915	ENSNBRG00000006021	chd1l	95	61.948	Neolamprologus_brichardi
ENSUMAG00000009733	CHD1L	99	89.367	ENSNLEG00000000179	CHD1L	100	88.704	Nomascus_leucogenys
ENSUMAG00000009733	CHD1L	97	72.909	ENSOPRG00000006973	CHD1L	99	74.824	Ochotona_princeps
ENSUMAG00000009733	CHD1L	98	82.638	ENSODEG00000002494	CHD1L	99	82.739	Octodon_degus
ENSUMAG00000009733	CHD1L	96	65.435	ENSONIG00000003183	chd1l	89	64.813	Oreochromis_niloticus
ENSUMAG00000009733	CHD1L	88	70.893	ENSOANG00000003068	CHD1L	93	71.871	Ornithorhynchus_anatinus
ENSUMAG00000009733	CHD1L	98	84.636	ENSOCUG00000009336	CHD1L	99	81.668	Oryctolagus_cuniculus
ENSUMAG00000009733	CHD1L	96	64.346	ENSORLG00000003673	chd1l	95	62.342	Oryzias_latipes
ENSUMAG00000009733	CHD1L	98	62.018	ENSORLG00020005123	chd1l	98	61.823	Oryzias_latipes_hni
ENSUMAG00000009733	CHD1L	96	64.149	ENSORLG00015001680	chd1l	98	62.529	Oryzias_latipes_hsok
ENSUMAG00000009733	CHD1L	78	61.243	ENSOMEG00000006109	chd1l	83	61.372	Oryzias_melastigma
ENSUMAG00000009733	CHD1L	99	88.202	ENSOGAG00000008775	CHD1L	99	88.202	Otolemur_garnettii
ENSUMAG00000009733	CHD1L	99	88.539	ENSOARG00000020547	CHD1L	99	89.517	Ovis_aries
ENSUMAG00000009733	CHD1L	97	88.952	ENSPPAG00000039193	CHD1L	100	90.667	Pan_paniscus
ENSUMAG00000009733	CHD1L	99	92.542	ENSPPRG00000010258	CHD1L	100	92.027	Panthera_pardus
ENSUMAG00000009733	CHD1L	99	89.706	ENSPTRG00000001220	CHD1L	100	89.135	Pan_troglodytes
ENSUMAG00000009733	CHD1L	98	89.875	ENSPANG00000009170	CHD1L	100	89.037	Papio_anubis
ENSUMAG00000009733	CHD1L	98	64.068	ENSPKIG00000022166	chd1l	97	62.981	Paramormyrops_kingsleyae
ENSUMAG00000009733	CHD1L	96	76.259	ENSPSIG00000012595	CHD1L	98	74.661	Pelodiscus_sinensis
ENSUMAG00000009733	CHD1L	92	60.641	ENSPMGG00000015884	-	98	58.564	Periophthalmus_magnuspinnatus
ENSUMAG00000009733	CHD1L	98	82.247	ENSPEMG00000013528	Chd1l	99	82.536	Peromyscus_maniculatus_bairdii
ENSUMAG00000009733	CHD1L	92	81.694	ENSPCIG00000030409	CHD1L	99	81.319	Phascolarctos_cinereus
ENSUMAG00000009733	CHD1L	96	65.000	ENSPFOG00000015948	chd1l	87	62.992	Poecilia_formosa
ENSUMAG00000009733	CHD1L	96	64.858	ENSPLAG00000015145	chd1l	99	62.835	Poecilia_latipinna
ENSUMAG00000009733	CHD1L	96	64.133	ENSPMEG00000008720	chd1l	92	62.444	Poecilia_mexicana
ENSUMAG00000009733	CHD1L	96	63.452	ENSPREG00000017885	chd1l	98	61.889	Poecilia_reticulata
ENSUMAG00000009733	CHD1L	99	90.271	ENSPPYG00000000946	CHD1L	99	90.112	Pongo_abelii
ENSUMAG00000009733	CHD1L	99	81.572	ENSPCAG00000005959	CHD1L	100	75.916	Procavia_capensis
ENSUMAG00000009733	CHD1L	96	80.672	ENSPVAG00000006084	CHD1L	100	80.969	Pteropus_vampyrus
ENSUMAG00000009733	CHD1L	98	63.514	ENSPNYG00000013001	chd1l	98	63.861	Pundamilia_nyererei
ENSUMAG00000009733	CHD1L	96	65.348	ENSPNAG00000011881	chd1l	85	64.834	Pygocentrus_nattereri
ENSUMAG00000009733	CHD1L	99	83.907	ENSRNOG00000017669	Chd1l	99	84.795	Rattus_norvegicus
ENSUMAG00000009733	CHD1L	99	88.235	ENSRBIG00000041272	CHD1L	100	87.486	Rhinopithecus_bieti
ENSUMAG00000009733	CHD1L	98	87.941	ENSRROG00000041354	CHD1L	99	87.741	Rhinopithecus_roxellana
ENSUMAG00000009733	CHD1L	98	76.217	ENSSHAG00000017395	CHD1L	100	75.585	Sarcophilus_harrisii
ENSUMAG00000009733	CHD1L	96	66.986	ENSSFOG00015003649	chd1l	99	64.009	Scleropages_formosus
ENSUMAG00000009733	CHD1L	99	60.354	ENSSMAG00000019377	chd1l	98	60.000	Scophthalmus_maximus
ENSUMAG00000009733	CHD1L	96	64.734	ENSSDUG00000019831	chd1l	98	63.314	Seriola_dumerili
ENSUMAG00000009733	CHD1L	96	64.243	ENSSLDG00000012714	chd1l	99	62.640	Seriola_lalandi_dorsalis
ENSUMAG00000009733	CHD1L	96	74.101	ENSSPUG00000016865	CHD1L	98	72.883	Sphenodon_punctatus
ENSUMAG00000009733	CHD1L	98	63.729	ENSSPAG00000017653	chd1l	93	64.382	Stegastes_partitus
ENSUMAG00000009733	CHD1L	99	86.559	ENSSSCG00000006701	CHD1L	98	89.054	Sus_scrofa
ENSUMAG00000009733	CHD1L	96	74.402	ENSTGUG00000013392	-	99	74.279	Taeniopygia_guttata
ENSUMAG00000009733	CHD1L	84	62.102	ENSTRUG00000011753	-	87	58.309	Takifugu_rubripes
ENSUMAG00000009733	CHD1L	54	53.202	ENSTRUG00000020456	-	82	53.883	Takifugu_rubripes
ENSUMAG00000009733	CHD1L	96	59.592	ENSTNIG00000004902	chd1l	99	58.159	Tetraodon_nigroviridis
ENSUMAG00000009733	CHD1L	96	86.675	ENSTTRG00000011711	CHD1L	99	87.456	Tursiops_truncatus
ENSUMAG00000009733	CHD1L	100	99.330	ENSUAMG00000021991	CHD1L	100	99.330	Ursus_americanus
ENSUMAG00000009733	CHD1L	99	92.351	ENSVVUG00000007316	CHD1L	95	92.351	Vulpes_vulpes
ENSUMAG00000009733	CHD1L	98	62.368	ENSXCOG00000008336	chd1l	86	61.416	Xiphophorus_couchianus
ENSUMAG00000009733	CHD1L	98	64.947	ENSXMAG00000015898	chd1l	98	60.023	Xiphophorus_maculatus