EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000009734 (Gene tree)
Gene ID: 103681852
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 39527 bases
Position: chrKK499449.1:3997165-4036691
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000013951	RRM_5	PF13893.6	5.9e-07	1	1
ENSUMAP00000013922	RRM_5	PF13893.6	8.1e-07	1	1
ENSUMAP00000013935	RRM_5	PF13893.6	8.6e-07	1	1
ENSUMAP00000013891	RRM_5	PF13893.6	8.7e-07	1	1
ENSUMAP00000013951	RRM_1	PF00076.22	2.3e-13	1	1
ENSUMAP00000013891	RRM_1	PF00076.22	3.2e-13	1	1
ENSUMAP00000013922	RRM_1	PF00076.22	3.2e-13	1	1
ENSUMAP00000013935	RRM_1	PF00076.22	3.4e-13	1	1
ENSUMAP00000013954	SAP	PF02037.27	9.4e-12	1	1
ENSUMAP00000013951	SAP	PF02037.27	6.2e-11	1	1
ENSUMAP00000013922	SAP	PF02037.27	8.5e-11	1	1
ENSUMAP00000013935	SAP	PF02037.27	9e-11	1	1
ENSUMAP00000013891	SAP	PF02037.27	9.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000016543	SAFB-204	2016	-	ENSUMAP00000013951	671 (aa)	-	-
ENSUMAT00000016514	SAFB-202	2433	-	ENSUMAP00000013922	810 (aa)	-	-
ENSUMAT00000016527	SAFB-203	2541	-	ENSUMAP00000013935	846 (aa)	-	-
ENSUMAT00000016477	SAFB-201	2598	-	ENSUMAP00000013891	865 (aa)	-	-
ENSUMAT00000016546	SAFB-205	354	-	ENSUMAP00000013954	117 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000009734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000009734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000009734	SAFB	88	72.105	ENSUMAG00000009585	SAFB2	100	63.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000009734	SAFB	97	91.115	ENSG00000160633	SAFB	88	97.849	Homo_sapiens
ENSUMAG00000009734	SAFB	85	42.977	ENSAPOG00000022508	safb	73	43.266	Acanthochromis_polyacanthus
ENSUMAG00000009734	SAFB	97	96.129	ENSAMEG00000012254	SAFB	87	97.445	Ailuropoda_melanoleuca
ENSUMAG00000009734	SAFB	85	42.379	ENSACIG00000006247	safb	79	42.434	Amphilophus_citrinellus
ENSUMAG00000009734	SAFB	87	42.339	ENSAOCG00000006308	safb	79	44.007	Amphiprion_ocellaris
ENSUMAG00000009734	SAFB	72	56.180	ENSAPEG00000023342	safb	73	43.170	Amphiprion_percula
ENSUMAG00000009734	SAFB	85	42.833	ENSATEG00000004998	safb	74	42.809	Anabas_testudineus
ENSUMAG00000009734	SAFB	76	71.818	ENSAPLG00000006355	-	79	71.818	Anas_platyrhynchos
ENSUMAG00000009734	SAFB	89	62.186	ENSAPLG00000005780	-	87	61.331	Anas_platyrhynchos
ENSUMAG00000009734	SAFB	97	92.775	ENSANAG00000028821	SAFB	88	92.977	Aotus_nancymaae
ENSUMAG00000009734	SAFB	85	43.599	ENSACLG00000001926	safb	72	43.696	Astatotilapia_calliptera
ENSUMAG00000009734	SAFB	73	60.674	ENSAMXG00000018154	safb	73	44.054	Astyanax_mexicanus
ENSUMAG00000009734	SAFB	79	94.565	ENSBTAG00000051794	-	91	90.710	Bos_taurus
ENSUMAG00000009734	SAFB	95	91.774	ENSBTAG00000007875	SAFB	88	91.803	Bos_taurus
ENSUMAG00000009734	SAFB	84	92.885	ENSCJAG00000017081	SAFB	85	93.004	Callithrix_jacchus
ENSUMAG00000009734	SAFB	97	96.935	ENSCAFG00000018803	SAFB	82	96.562	Canis_familiaris
ENSUMAG00000009734	SAFB	97	96.935	ENSCAFG00020018943	SAFB	88	96.890	Canis_lupus_dingo
ENSUMAG00000009734	SAFB	95	93.092	ENSCHIG00000007262	SAFB	95	91.707	Capra_hircus
ENSUMAG00000009734	SAFB	51	94.468	ENSTSYG00000001851	-	81	94.248	Carlito_syrichta
ENSUMAG00000009734	SAFB	92	72.953	ENSCAPG00000012121	SAFB	100	74.318	Cavia_aperea
ENSUMAG00000009734	SAFB	96	84.615	ENSCPOG00000026322	SAFB	89	84.567	Cavia_porcellus
ENSUMAG00000009734	SAFB	97	92.775	ENSCCAG00000020193	SAFB	88	92.821	Cebus_capucinus
ENSUMAG00000009734	SAFB	97	91.438	ENSCATG00000029994	SAFB	89	91.326	Cercocebus_atys
ENSUMAG00000009734	SAFB	96	87.639	ENSCLAG00000007734	SAFB	89	87.599	Chinchilla_lanigera
ENSUMAG00000009734	SAFB	97	91.438	ENSCSAG00000009949	SAFB	89	91.326	Chlorocebus_sabaeus
ENSUMAG00000009734	SAFB	74	94.444	ENSCHOG00000003208	SAFB	81	90.476	Choloepus_hoffmanni
ENSUMAG00000009734	SAFB	88	60.112	ENSCPBG00000010928	-	86	60.943	Chrysemys_picta_bellii
ENSUMAG00000009734	SAFB	85	57.829	ENSCPBG00000010936	-	86	58.437	Chrysemys_picta_bellii
ENSUMAG00000009734	SAFB	91	93.617	ENSCANG00000004774	-	95	93.617	Colobus_angolensis_palliatus
ENSUMAG00000009734	SAFB	97	87.809	ENSCANG00000019754	-	89	87.646	Colobus_angolensis_palliatus
ENSUMAG00000009734	SAFB	88	90.780	ENSCGRG00001002254	Safb	83	90.780	Cricetulus_griseus_chok1gshd
ENSUMAG00000009734	SAFB	78	90.780	ENSCGRG00000011529	Safb	79	90.780	Cricetulus_griseus_crigri
ENSUMAG00000009734	SAFB	85	41.084	ENSCSEG00000019870	safb	66	40.956	Cynoglossus_semilaevis
ENSUMAG00000009734	SAFB	55	66.667	ENSCVAG00000002226	safb	60	48.718	Cyprinodon_variegatus
ENSUMAG00000009734	SAFB	60	64.865	ENSDARG00000020467	safb	60	59.167	Danio_rerio
ENSUMAG00000009734	SAFB	97	91.290	ENSDNOG00000015746	SAFB	82	89.489	Dasypus_novemcinctus
ENSUMAG00000009734	SAFB	97	85.156	ENSDORG00000016200	Safb	85	90.780	Dipodomys_ordii
ENSUMAG00000009734	SAFB	80	82.836	ENSETEG00000018679	SAFB	71	86.730	Echinops_telfairi
ENSUMAG00000009734	SAFB	96	89.176	ENSEASG00005023019	SAFB	89	88.710	Equus_asinus_asinus
ENSUMAG00000009734	SAFB	96	89.773	ENSECAG00000018659	SAFB	85	88.473	Equus_caballus
ENSUMAG00000009734	SAFB	76	56.044	ENSELUG00000022327	safb	94	44.670	Esox_lucius
ENSUMAG00000009734	SAFB	97	96.613	ENSFCAG00000011835	SAFB	88	96.563	Felis_catus
ENSUMAG00000009734	SAFB	80	58.497	ENSFALG00000013881	-	86	59.358	Ficedula_albicollis
ENSUMAG00000009734	SAFB	96	62.945	ENSFALG00000013882	-	73	61.628	Ficedula_albicollis
ENSUMAG00000009734	SAFB	85	91.919	ENSFDAG00000020306	SAFB	99	77.300	Fukomys_damarensis
ENSUMAG00000009734	SAFB	72	58.140	ENSFHEG00000004219	safb	58	52.448	Fundulus_heteroclitus
ENSUMAG00000009734	SAFB	55	67.692	ENSGMOG00000014280	safb	72	40.778	Gadus_morhua
ENSUMAG00000009734	SAFB	96	62.561	ENSGALG00000013365	-	85	62.779	Gallus_gallus
ENSUMAG00000009734	SAFB	94	57.609	ENSGALG00000001948	-	85	59.385	Gallus_gallus
ENSUMAG00000009734	SAFB	85	42.070	ENSGACG00000011385	safb	74	42.642	Gasterosteus_aculeatus
ENSUMAG00000009734	SAFB	60	55.862	ENSGAGG00000017702	-	83	54.039	Gopherus_agassizii
ENSUMAG00000009734	SAFB	91	58.733	ENSGAGG00000008424	-	84	59.774	Gopherus_agassizii
ENSUMAG00000009734	SAFB	97	92.447	ENSGGOG00000015109	SAFB	88	97.849	Gorilla_gorilla
ENSUMAG00000009734	SAFB	85	41.297	ENSHBUG00000009218	safb	77	40.816	Haplochromis_burtoni
ENSUMAG00000009734	SAFB	96	87.917	ENSHGLG00000015883	SAFB	89	87.879	Heterocephalus_glaber_female
ENSUMAG00000009734	SAFB	88	92.908	ENSHGLG00100004228	SAFB	91	92.908	Heterocephalus_glaber_male
ENSUMAG00000009734	SAFB	79	38.532	ENSHCOG00000001705	safb	75	40.000	Hippocampus_comes
ENSUMAG00000009734	SAFB	79	61.458	ENSIPUG00000024869	safb2	76	46.844	Ictalurus_punctatus
ENSUMAG00000009734	SAFB	88	87.965	ENSSTOG00000002783	SAFB	82	94.326	Ictidomys_tridecemlineatus
ENSUMAG00000009734	SAFB	88	92.199	ENSJJAG00000009021	Safb	81	92.199	Jaculus_jaculus
ENSUMAG00000009734	SAFB	85	40.948	ENSKMAG00000022308	safb	73	38.992	Kryptolebias_marmoratus
ENSUMAG00000009734	SAFB	87	43.842	ENSLBEG00000006015	safb	65	44.333	Labrus_bergylta
ENSUMAG00000009734	SAFB	89	51.993	ENSLACG00000018090	SAFB	87	51.864	Latimeria_chalumnae
ENSUMAG00000009734	SAFB	68	66.667	ENSLOCG00000003613	safb	76	48.748	Lepisosteus_oculatus
ENSUMAG00000009734	SAFB	96	89.871	ENSLAFG00000003840	SAFB	88	88.636	Loxodonta_africana
ENSUMAG00000009734	SAFB	97	91.304	ENSMFAG00000003885	SAFB	88	96.774	Macaca_fascicularis
ENSUMAG00000009734	SAFB	97	93.103	ENSMMUG00000017970	SAFB	88	96.774	Macaca_mulatta
ENSUMAG00000009734	SAFB	97	89.819	ENSMNEG00000035637	SAFB	88	96.774	Macaca_nemestrina
ENSUMAG00000009734	SAFB	97	87.150	ENSMLEG00000038637	SAFB	88	96.774	Mandrillus_leucophaeus
ENSUMAG00000009734	SAFB	87	41.789	ENSMAMG00000003357	safb	67	42.689	Mastacembelus_armatus
ENSUMAG00000009734	SAFB	85	43.772	ENSMZEG00005009120	safb	74	42.928	Maylandia_zebra
ENSUMAG00000009734	SAFB	92	60.000	ENSMGAG00000001101	-	84	60.799	Meleagris_gallopavo
ENSUMAG00000009734	SAFB	76	67.500	ENSMGAG00000001051	-	77	67.500	Meleagris_gallopavo
ENSUMAG00000009734	SAFB	94	95.833	ENSMICG00000046795	-	98	93.617	Microcebus_murinus
ENSUMAG00000009734	SAFB	80	95.745	ENSMICG00000034927	-	77	97.826	Microcebus_murinus
ENSUMAG00000009734	SAFB	95	88.567	ENSMICG00000008739	-	89	88.380	Microcebus_murinus
ENSUMAG00000009734	SAFB	88	92.199	ENSMOCG00000014040	Safb	83	92.199	Microtus_ochrogaster
ENSUMAG00000009734	SAFB	73	54.545	ENSMMOG00000020366	-	65	52.381	Mola_mola
ENSUMAG00000009734	SAFB	97	71.562	ENSMODG00000001236	SAFB	86	72.277	Monodelphis_domestica
ENSUMAG00000009734	SAFB	76	55.102	ENSMALG00000020330	safb	75	42.697	Monopterus_albus
ENSUMAG00000009734	SAFB	88	91.489	MGP_CAROLIEiJ_G0021780	Safb	83	91.489	Mus_caroli
ENSUMAG00000009734	SAFB	88	91.489	ENSMUSG00000071054	Safb	83	91.489	Mus_musculus
ENSUMAG00000009734	SAFB	88	91.489	MGP_PahariEiJ_G0020769	Safb	96	85.366	Mus_pahari
ENSUMAG00000009734	SAFB	97	95.806	ENSMPUG00000006123	SAFB	89	95.516	Mustela_putorius_furo
ENSUMAG00000009734	SAFB	96	93.344	ENSMLUG00000001081	SAFB	88	93.290	Myotis_lucifugus
ENSUMAG00000009734	SAFB	88	87.943	ENSNGAG00000019882	Safb	83	87.943	Nannospalax_galili
ENSUMAG00000009734	SAFB	56	63.768	ENSNBRG00000000496	-	66	62.857	Neolamprologus_brichardi
ENSUMAG00000009734	SAFB	96	92.775	ENSNLEG00000013551	SAFB	88	90.998	Nomascus_leucogenys
ENSUMAG00000009734	SAFB	83	80.692	ENSOPRG00000011561	-	87	81.239	Ochotona_princeps
ENSUMAG00000009734	SAFB	96	89.839	ENSODEG00000014838	SAFB	89	88.095	Octodon_degus
ENSUMAG00000009734	SAFB	87	42.881	ENSONIG00000002318	safb	74	43.719	Oreochromis_niloticus
ENSUMAG00000009734	SAFB	79	94.326	ENSOCUG00000014628	SAFB	81	94.326	Oryctolagus_cuniculus
ENSUMAG00000009734	SAFB	85	42.470	ENSORLG00000016989	safb	76	41.071	Oryzias_latipes
ENSUMAG00000009734	SAFB	85	40.204	ENSORLG00020000404	safb	69	39.274	Oryzias_latipes_hni
ENSUMAG00000009734	SAFB	85	42.640	ENSORLG00015010733	safb	76	41.234	Oryzias_latipes_hsok
ENSUMAG00000009734	SAFB	96	88.655	ENSOGAG00000027769	SAFB	88	88.399	Otolemur_garnettii
ENSUMAG00000009734	SAFB	84	85.665	ENSOARG00000007856	-	83	85.665	Ovis_aries
ENSUMAG00000009734	SAFB	95	91.290	ENSOARG00000007662	-	89	91.311	Ovis_aries
ENSUMAG00000009734	SAFB	97	92.611	ENSPPAG00000035129	SAFB	88	97.849	Pan_paniscus
ENSUMAG00000009734	SAFB	97	96.613	ENSPPRG00000017197	SAFB	88	96.563	Panthera_pardus
ENSUMAG00000009734	SAFB	97	90.879	ENSPTRG00000010335	SAFB	88	97.849	Pan_troglodytes
ENSUMAG00000009734	SAFB	97	91.143	ENSPANG00000007770	SAFB	88	96.774	Papio_anubis
ENSUMAG00000009734	SAFB	85	44.663	ENSPKIG00000009902	safb	74	44.000	Paramormyrops_kingsleyae
ENSUMAG00000009734	SAFB	99	59.084	ENSPSIG00000009367	-	84	59.396	Pelodiscus_sinensis
ENSUMAG00000009734	SAFB	96	58.054	ENSPSIG00000011679	-	86	60.854	Pelodiscus_sinensis
ENSUMAG00000009734	SAFB	80	55.670	ENSPMGG00000015973	-	73	56.471	Periophthalmus_magnuspinnatus
ENSUMAG00000009734	SAFB	88	90.780	ENSPEMG00000020428	Safb	83	90.780	Peromyscus_maniculatus_bairdii
ENSUMAG00000009734	SAFB	51	81.743	ENSPCIG00000009504	-	72	76.800	Phascolarctos_cinereus
ENSUMAG00000009734	SAFB	80	39.502	ENSPFOG00000007745	safb	59	53.629	Poecilia_formosa
ENSUMAG00000009734	SAFB	55	62.121	ENSPLAG00000001614	safb	75	38.806	Poecilia_latipinna
ENSUMAG00000009734	SAFB	55	62.121	ENSPMEG00000021023	safb	59	53.629	Poecilia_mexicana
ENSUMAG00000009734	SAFB	55	62.121	ENSPREG00000012496	safb	60	54.032	Poecilia_reticulata
ENSUMAG00000009734	SAFB	97	91.276	ENSPPYG00000009428	SAFB	89	91.162	Pongo_abelii
ENSUMAG00000009734	SAFB	96	84.194	ENSPCAG00000006475	SAFB	88	84.065	Procavia_capensis
ENSUMAG00000009734	SAFB	89	92.199	ENSPCOG00000014090	SAFB	89	86.885	Propithecus_coquereli
ENSUMAG00000009734	SAFB	79	97.826	ENSPCOG00000010436	-	83	97.826	Propithecus_coquereli
ENSUMAG00000009734	SAFB	84	93.878	ENSPVAG00000004913	SAFB	78	93.878	Pteropus_vampyrus
ENSUMAG00000009734	SAFB	83	43.907	ENSPNAG00000021838	safb	76	45.114	Pygocentrus_nattereri
ENSUMAG00000009734	SAFB	88	90.071	ENSRNOG00000050543	Safb	83	90.071	Rattus_norvegicus
ENSUMAG00000009734	SAFB	88	92.233	ENSRBIG00000042509	SAFB	88	97.849	Rhinopithecus_bieti
ENSUMAG00000009734	SAFB	97	91.465	ENSRROG00000029278	SAFB	88	97.849	Rhinopithecus_roxellana
ENSUMAG00000009734	SAFB	97	91.572	ENSSBOG00000026291	SAFB	89	90.998	Saimiri_boliviensis_boliviensis
ENSUMAG00000009734	SAFB	85	46.281	ENSSFOG00015008156	safb	74	45.634	Scleropages_formosus
ENSUMAG00000009734	SAFB	85	43.000	ENSSMAG00000009316	safb	73	42.450	Scophthalmus_maximus
ENSUMAG00000009734	SAFB	87	42.289	ENSSDUG00000009652	safb	81	43.053	Seriola_dumerili
ENSUMAG00000009734	SAFB	85	42.596	ENSSLDG00000001670	safb	73	42.479	Seriola_lalandi_dorsalis
ENSUMAG00000009734	SAFB	89	85.870	ENSSARG00000010475	SAFB	87	85.740	Sorex_araneus
ENSUMAG00000009734	SAFB	83	57.476	ENSSPUG00000009747	-	99	50.524	Sphenodon_punctatus
ENSUMAG00000009734	SAFB	69	65.421	ENSSPUG00000009820	-	87	57.447	Sphenodon_punctatus
ENSUMAG00000009734	SAFB	68	56.471	ENSSPAG00000015682	safb	78	40.301	Stegastes_partitus
ENSUMAG00000009734	SAFB	96	92.504	ENSSSCG00000013522	SAFB	89	92.794	Sus_scrofa
ENSUMAG00000009734	SAFB	92	61.650	ENSTGUG00000000502	-	85	61.735	Taeniopygia_guttata
ENSUMAG00000009734	SAFB	89	61.129	ENSTGUG00000000489	-	84	63.087	Taeniopygia_guttata
ENSUMAG00000009734	SAFB	87	41.362	ENSTRUG00000003567	safb	73	40.468	Takifugu_rubripes
ENSUMAG00000009734	SAFB	85	41.957	ENSTNIG00000015470	safb	76	40.973	Tetraodon_nigroviridis
ENSUMAG00000009734	SAFB	54	96.825	ENSTBEG00000013124	-	56	89.552	Tupaia_belangeri
ENSUMAG00000009734	SAFB	88	100.000	ENSTTRG00000013588	SAFB	80	100.000	Tursiops_truncatus
ENSUMAG00000009734	SAFB	72	100.000	ENSUAMG00000024543	SAFB	86	100.000	Ursus_americanus
ENSUMAG00000009734	SAFB	100	100.000	ENSUAMG00000024667	-	100	100.000	Ursus_americanus
ENSUMAG00000009734	SAFB	69	98.425	ENSVPAG00000012043	SAFB	68	98.438	Vicugna_pacos
ENSUMAG00000009734	SAFB	97	96.774	ENSVVUG00000013720	SAFB	82	96.263	Vulpes_vulpes
ENSUMAG00000009734	SAFB	89	49.588	ENSXETG00000008755	safb	84	50.000	Xenopus_tropicalis
ENSUMAG00000009734	SAFB	68	58.537	ENSXCOG00000010246	-	66	64.179	Xiphophorus_couchianus
ENSUMAG00000009734	SAFB	55	60.606	ENSXMAG00000003458	safb	60	52.529	Xiphophorus_maculatus