EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000009827 (Gene tree)
Gene ID: 103671593
Gene Symbol: SRSF5
Alias: -
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 5022 bases
Position: chrKK498517.1:26114620-26119641
Accession: 103671593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000013297	RRM_1	PF00076.22	1.1e-30	1	2
ENSUMAP00000013297	RRM_1	PF00076.22	1.1e-30	2	2
ENSUMAP00000013293	RRM_1	PF00076.22	2.7e-27	1	1
ENSUMAP00000013301	RRM_1	PF00076.22	2.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000015786	SRSF5-203	1827	-	ENSUMAP00000013301	349 (aa)	-	-
ENSUMAT00000015776	SRSF5-201	1883	-	ENSUMAP00000013293	349 (aa)	-	-
ENSUMAT00000015781	SRSF5-202	1649	XM_008700257	ENSUMAP00000013297	271 (aa)	XP_008698479	UPI00004F2B51

Gene Model

Click here to download ENSUMAG00000009827's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG
umr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000009827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000009827	SRSF5	59	45.509	ENSUMAG00000000455	-	63	46.988

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000009827	SRSF5	100	98.175	ENSG00000100650	SRSF5	100	100.000	Homo_sapiens
ENSUMAG00000009827	SRSF5	67	82.540	ENSAPOG00000008642	srsf5b	63	93.548	Acanthochromis_polyacanthus
ENSUMAG00000009827	SRSF5	100	99.632	ENSAMEG00000014574	SRSF5	100	99.632	Ailuropoda_melanoleuca
ENSUMAG00000009827	SRSF5	92	63.910	ENSACIG00000010742	srsf5b	81	78.295	Amphilophus_citrinellus
ENSUMAG00000009827	SRSF5	96	65.918	ENSAOCG00000005719	srsf5b	63	93.548	Amphiprion_ocellaris
ENSUMAG00000009827	SRSF5	96	65.918	ENSAPEG00000007830	srsf5b	63	93.548	Amphiprion_percula
ENSUMAG00000009827	SRSF5	92	67.188	ENSATEG00000019112	srsf5b	63	90.625	Anabas_testudineus
ENSUMAG00000009827	SRSF5	98	81.579	ENSAPLG00000014681	SRSF5	67	94.444	Anas_platyrhynchos
ENSUMAG00000009827	SRSF5	100	95.238	ENSACAG00000005143	SRSF5	67	98.889	Anolis_carolinensis
ENSUMAG00000009827	SRSF5	100	98.535	ENSANAG00000027977	-	100	100.000	Aotus_nancymaae
ENSUMAG00000009827	SRSF5	92	64.151	ENSACLG00000026424	srsf5b	63	87.097	Astatotilapia_calliptera
ENSUMAG00000009827	SRSF5	71	83.333	ENSAMXG00000011932	srsf5b	84	82.400	Astyanax_mexicanus
ENSUMAG00000009827	SRSF5	100	99.632	ENSBTAG00000011596	SRSF5	100	99.632	Bos_taurus
ENSUMAG00000009827	SRSF5	100	98.175	ENSCJAG00000014884	SRSF5	100	100.000	Callithrix_jacchus
ENSUMAG00000009827	SRSF5	100	99.632	ENSCAFG00000016589	SRSF5	100	99.632	Canis_familiaris
ENSUMAG00000009827	SRSF5	100	99.632	ENSCAFG00020005661	SRSF5	100	99.632	Canis_lupus_dingo
ENSUMAG00000009827	SRSF5	100	98.905	ENSCHIG00000016794	SRSF5	100	98.905	Capra_hircus
ENSUMAG00000009827	SRSF5	100	97.464	ENSTSYG00000007786	SRSF5	100	100.000	Carlito_syrichta
ENSUMAG00000009827	SRSF5	100	98.175	ENSCAPG00000008801	SRSF5	100	98.175	Cavia_aperea
ENSUMAG00000009827	SRSF5	100	97.810	ENSCPOG00000039926	SRSF5	100	97.810	Cavia_porcellus
ENSUMAG00000009827	SRSF5	100	98.175	ENSCCAG00000029002	SRSF5	100	100.000	Cebus_capucinus
ENSUMAG00000009827	SRSF5	100	97.810	ENSCATG00000045051	SRSF5	100	100.000	Cercocebus_atys
ENSUMAG00000009827	SRSF5	100	98.897	ENSCLAG00000004755	SRSF5	100	98.897	Chinchilla_lanigera
ENSUMAG00000009827	SRSF5	100	98.175	ENSCSAG00000013041	SRSF5	100	98.175	Chlorocebus_sabaeus
ENSUMAG00000009827	SRSF5	100	95.956	ENSCPBG00000021653	SRSF5	100	95.956	Chrysemys_picta_bellii
ENSUMAG00000009827	SRSF5	100	98.175	ENSCANG00000030560	SRSF5	100	100.000	Colobus_angolensis_palliatus
ENSUMAG00000009827	SRSF5	100	98.155	ENSCGRG00001015339	Srsf5	100	98.155	Cricetulus_griseus_chok1gshd
ENSUMAG00000009827	SRSF5	100	98.155	ENSCGRG00000009833	Srsf5	100	98.155	Cricetulus_griseus_crigri
ENSUMAG00000009827	SRSF5	88	68.675	ENSCSEG00000003801	srsf5b	64	90.625	Cynoglossus_semilaevis
ENSUMAG00000009827	SRSF5	67	82.540	ENSCVAG00000017240	srsf5b	59	83.117	Cyprinodon_variegatus
ENSUMAG00000009827	SRSF5	72	82.000	ENSDARG00000027734	srsf5b	90	82.400	Danio_rerio
ENSUMAG00000009827	SRSF5	100	98.529	ENSDNOG00000006160	SRSF5	100	98.529	Dasypus_novemcinctus
ENSUMAG00000009827	SRSF5	100	99.262	ENSDORG00000003989	Srsf5	100	100.000	Dipodomys_ordii
ENSUMAG00000009827	SRSF5	100	87.132	ENSETEG00000020396	SRSF5	88	87.075	Echinops_telfairi
ENSUMAG00000009827	SRSF5	67	64.865	ENSEBUG00000006229	srsf5b	56	64.626	Eptatretus_burgeri
ENSUMAG00000009827	SRSF5	100	99.632	ENSEASG00005016615	SRSF5	100	99.632	Equus_asinus_asinus
ENSUMAG00000009827	SRSF5	100	99.631	ENSECAG00000026873	SRSF5	100	99.631	Equus_caballus
ENSUMAG00000009827	SRSF5	67	78.866	ENSELUG00000019852	srsf5b	85	69.863	Esox_lucius
ENSUMAG00000009827	SRSF5	100	99.632	ENSFCAG00000008848	SRSF5	100	99.632	Felis_catus
ENSUMAG00000009827	SRSF5	66	95.531	ENSFALG00000004979	SRSF5	67	94.972	Ficedula_albicollis
ENSUMAG00000009827	SRSF5	100	98.893	ENSFDAG00000011562	SRSF5	100	100.000	Fukomys_damarensis
ENSUMAG00000009827	SRSF5	96	64.158	ENSFHEG00000009476	srsf5b	62	83.117	Fundulus_heteroclitus
ENSUMAG00000009827	SRSF5	67	67.257	ENSGMOG00000000595	srsf5b	97	67.117	Gadus_morhua
ENSUMAG00000009827	SRSF5	100	94.834	ENSGALG00000009421	SRSF5	90	90.323	Gallus_gallus
ENSUMAG00000009827	SRSF5	96	65.818	ENSGAFG00000002865	srsf5b	63	81.169	Gambusia_affinis
ENSUMAG00000009827	SRSF5	66	61.134	ENSGACG00000007834	srsf5b	86	71.324	Gasterosteus_aculeatus
ENSUMAG00000009827	SRSF5	100	95.956	ENSGAGG00000004447	SRSF5	100	95.956	Gopherus_agassizii
ENSUMAG00000009827	SRSF5	100	98.175	ENSGGOG00000016462	SRSF5	100	100.000	Gorilla_gorilla
ENSUMAG00000009827	SRSF5	67	81.481	ENSHBUG00000012462	srsf5b	93	75.781	Haplochromis_burtoni
ENSUMAG00000009827	SRSF5	100	98.529	ENSHGLG00000010147	SRSF5	100	98.529	Heterocephalus_glaber_female
ENSUMAG00000009827	SRSF5	100	65.809	ENSHGLG00100000095	-	62	65.517	Heterocephalus_glaber_male
ENSUMAG00000009827	SRSF5	100	98.529	ENSHGLG00100015328	SRSF5	100	98.529	Heterocephalus_glaber_male
ENSUMAG00000009827	SRSF5	67	75.521	ENSHCOG00000005592	srsf5b	64	87.097	Hippocampus_comes
ENSUMAG00000009827	SRSF5	100	98.897	ENSSTOG00000020672	SRSF5	100	98.897	Ictidomys_tridecemlineatus
ENSUMAG00000009827	SRSF5	100	98.529	ENSJJAG00000001688	Srsf5	100	98.529	Jaculus_jaculus
ENSUMAG00000009827	SRSF5	67	82.888	ENSKMAG00000020486	srsf5b	84	79.528	Kryptolebias_marmoratus
ENSUMAG00000009827	SRSF5	67	82.723	ENSLBEG00000013647	srsf5b	63	93.548	Labrus_bergylta
ENSUMAG00000009827	SRSF5	100	84.615	ENSLACG00000005874	SRSF5	70	90.604	Latimeria_chalumnae
ENSUMAG00000009827	SRSF5	97	72.491	ENSLOCG00000012438	srsf5b	69	90.323	Lepisosteus_oculatus
ENSUMAG00000009827	SRSF5	100	98.897	ENSLAFG00000005260	SRSF5	100	98.897	Loxodonta_africana
ENSUMAG00000009827	SRSF5	100	98.175	ENSMFAG00000002393	SRSF5	100	100.000	Macaca_fascicularis
ENSUMAG00000009827	SRSF5	100	98.175	ENSMNEG00000030872	SRSF5	100	100.000	Macaca_nemestrina
ENSUMAG00000009827	SRSF5	100	97.810	ENSMLEG00000030017	SRSF5	100	100.000	Mandrillus_leucophaeus
ENSUMAG00000009827	SRSF5	67	81.915	ENSMAMG00000002673	srsf5b	63	93.548	Mastacembelus_armatus
ENSUMAG00000009827	SRSF5	92	64.151	ENSMZEG00005003550	srsf5b	63	87.097	Maylandia_zebra
ENSUMAG00000009827	SRSF5	74	92.537	ENSMGAG00000011835	SRSF5	64	97.222	Meleagris_gallopavo
ENSUMAG00000009827	SRSF5	100	97.794	ENSMAUG00000009544	Srsf5	100	97.794	Mesocricetus_auratus
ENSUMAG00000009827	SRSF5	100	99.262	ENSMICG00000037432	-	100	100.000	Microcebus_murinus
ENSUMAG00000009827	SRSF5	100	97.426	ENSMOCG00000013134	Srsf5	100	97.426	Microtus_ochrogaster
ENSUMAG00000009827	SRSF5	66	81.622	ENSMMOG00000000137	srsf5b	93	61.538	Mola_mola
ENSUMAG00000009827	SRSF5	68	100.000	ENSMODG00000011362	SRSF5	71	100.000	Monodelphis_domestica
ENSUMAG00000009827	SRSF5	67	83.684	ENSMALG00000021875	srsf5b	63	96.774	Monopterus_albus
ENSUMAG00000009827	SRSF5	100	98.155	ENSMUSG00000021134	Srsf5	100	98.155	Mus_musculus
ENSUMAG00000009827	SRSF5	100	98.155	MGP_PahariEiJ_G0029659	Srsf5	100	98.155	Mus_pahari
ENSUMAG00000009827	SRSF5	100	99.632	ENSMPUG00000007458	SRSF5	100	99.632	Mustela_putorius_furo
ENSUMAG00000009827	SRSF5	100	92.473	ENSMLUG00000011939	SRSF5	64	100.000	Myotis_lucifugus
ENSUMAG00000009827	SRSF5	100	98.162	ENSNGAG00000010073	-	100	98.162	Nannospalax_galili
ENSUMAG00000009827	SRSF5	92	65.543	ENSNBRG00000001285	srsf5b	63	87.097	Neolamprologus_brichardi
ENSUMAG00000009827	SRSF5	100	98.175	ENSNLEG00000001615	SRSF5	100	100.000	Nomascus_leucogenys
ENSUMAG00000009827	SRSF5	100	96.429	ENSOPRG00000008286	SRSF5	100	96.429	Ochotona_princeps
ENSUMAG00000009827	SRSF5	100	97.794	ENSODEG00000013469	-	100	97.794	Octodon_degus
ENSUMAG00000009827	SRSF5	66	97.765	ENSODEG00000000700	-	72	97.959	Octodon_degus
ENSUMAG00000009827	SRSF5	92	64.151	ENSONIG00000005759	srsf5b	63	87.097	Oreochromis_niloticus
ENSUMAG00000009827	SRSF5	100	91.176	ENSOANG00000013336	SRSF5	94	83.333	Ornithorhynchus_anatinus
ENSUMAG00000009827	SRSF5	100	97.826	ENSOCUG00000009274	SRSF5	100	97.826	Oryctolagus_cuniculus
ENSUMAG00000009827	SRSF5	67	78.534	ENSORLG00000029854	srsf5b	58	84.375	Oryzias_latipes
ENSUMAG00000009827	SRSF5	92	64.045	ENSORLG00015001720	srsf5b	63	87.097	Oryzias_latipes_hsok
ENSUMAG00000009827	SRSF5	100	98.529	ENSOGAG00000015122	SRSF5	100	98.529	Otolemur_garnettii
ENSUMAG00000009827	SRSF5	100	98.175	ENSPPAG00000029921	SRSF5	100	100.000	Pan_paniscus
ENSUMAG00000009827	SRSF5	100	99.632	ENSPPRG00000012903	SRSF5	100	99.632	Panthera_pardus
ENSUMAG00000009827	SRSF5	100	99.632	ENSPTIG00000018589	SRSF5	100	99.632	Panthera_tigris_altaica
ENSUMAG00000009827	SRSF5	100	98.175	ENSPTRG00000006488	SRSF5	100	100.000	Pan_troglodytes
ENSUMAG00000009827	SRSF5	100	97.810	ENSPANG00000021091	SRSF5	100	100.000	Papio_anubis
ENSUMAG00000009827	SRSF5	100	95.588	ENSPSIG00000012522	SRSF5	100	95.588	Pelodiscus_sinensis
ENSUMAG00000009827	SRSF5	100	98.155	ENSPEMG00000020173	Srsf5	100	98.155	Peromyscus_maniculatus_bairdii
ENSUMAG00000009827	SRSF5	99	56.333	ENSPMAG00000007790	srsf5b	67	77.419	Petromyzon_marinus
ENSUMAG00000009827	SRSF5	68	100.000	ENSPCIG00000011877	SRSF5	71	100.000	Phascolarctos_cinereus
ENSUMAG00000009827	SRSF5	96	63.538	ENSPFOG00000017700	srsf5b	63	83.766	Poecilia_formosa
ENSUMAG00000009827	SRSF5	96	63.309	ENSPLAG00000006480	srsf5b	64	83.226	Poecilia_latipinna
ENSUMAG00000009827	SRSF5	96	63.538	ENSPMEG00000012751	srsf5b	84	75.000	Poecilia_mexicana
ENSUMAG00000009827	SRSF5	96	65.818	ENSPREG00000010381	srsf5b	63	82.468	Poecilia_reticulata
ENSUMAG00000009827	SRSF5	100	98.175	ENSPPYG00000005945	SRSF5	100	98.175	Pongo_abelii
ENSUMAG00000009827	SRSF5	54	99.315	ENSPCAG00000004405	SRSF5	100	99.315	Procavia_capensis
ENSUMAG00000009827	SRSF5	100	98.897	ENSPCOG00000014442	SRSF5	100	98.897	Propithecus_coquereli
ENSUMAG00000009827	SRSF5	100	78.309	ENSPVAG00000009828	SRSF5	100	78.309	Pteropus_vampyrus
ENSUMAG00000009827	SRSF5	92	71.705	ENSPNYG00000002669	srsf5b	94	75.000	Pundamilia_nyererei
ENSUMAG00000009827	SRSF5	67	82.162	ENSPNAG00000011262	srsf5b	84	81.600	Pygocentrus_nattereri
ENSUMAG00000009827	SRSF5	100	98.155	ENSRNOG00000005513	Srsf5	100	98.155	Rattus_norvegicus
ENSUMAG00000009827	SRSF5	100	98.175	ENSRBIG00000013003	SRSF5	100	100.000	Rhinopithecus_bieti
ENSUMAG00000009827	SRSF5	100	98.175	ENSRROG00000043407	SRSF5	100	100.000	Rhinopithecus_roxellana
ENSUMAG00000009827	SRSF5	100	98.175	ENSSBOG00000030784	SRSF5	100	100.000	Saimiri_boliviensis_boliviensis
ENSUMAG00000009827	SRSF5	68	100.000	ENSSHAG00000002871	SRSF5	71	100.000	Sarcophilus_harrisii
ENSUMAG00000009827	SRSF5	67	77.723	ENSSMAG00000019728	srsf5b	61	93.548	Scophthalmus_maximus
ENSUMAG00000009827	SRSF5	95	65.428	ENSSDUG00000005766	srsf5b	65	90.625	Seriola_dumerili
ENSUMAG00000009827	SRSF5	92	66.412	ENSSLDG00000023255	srsf5b	84	75.000	Seriola_lalandi_dorsalis
ENSUMAG00000009827	SRSF5	100	87.868	ENSSARG00000001059	SRSF5	88	82.993	Sorex_araneus
ENSUMAG00000009827	SRSF5	100	83.571	ENSSPUG00000002464	SRSF5	90	91.729	Sphenodon_punctatus
ENSUMAG00000009827	SRSF5	67	82.011	ENSSPAG00000015325	srsf5b	63	90.323	Stegastes_partitus
ENSUMAG00000009827	SRSF5	100	99.262	ENSSSCG00000032583	SRSF5	100	100.000	Sus_scrofa
ENSUMAG00000009827	SRSF5	89	84.583	ENSTGUG00000011425	SRSF5	67	94.972	Taeniopygia_guttata
ENSUMAG00000009827	SRSF5	67	83.333	ENSTRUG00000017811	srsf5b	59	87.500	Takifugu_rubripes
ENSUMAG00000009827	SRSF5	98	64.621	ENSTNIG00000016411	srsf5b	66	87.500	Tetraodon_nigroviridis
ENSUMAG00000009827	SRSF5	100	89.209	ENSTBEG00000001972	SRSF5	100	65.616	Tupaia_belangeri
ENSUMAG00000009827	SRSF5	99	98.901	ENSTTRG00000003318	SRSF5	100	98.901	Tursiops_truncatus
ENSUMAG00000009827	SRSF5	100	99.632	ENSUAMG00000014184	SRSF5	100	99.632	Ursus_americanus
ENSUMAG00000009827	SRSF5	100	98.897	ENSVPAG00000006448	SRSF5	100	98.897	Vicugna_pacos
ENSUMAG00000009827	SRSF5	100	99.632	ENSVVUG00000003790	SRSF5	100	99.632	Vulpes_vulpes
ENSUMAG00000009827	SRSF5	93	83.846	ENSXETG00000002211	srsf5	70	91.333	Xenopus_tropicalis
ENSUMAG00000009827	SRSF5	96	69.517	ENSXCOG00000001570	srsf5b	53	83.226	Xiphophorus_couchianus
ENSUMAG00000009827	SRSF5	98	64.964	ENSXMAG00000026416	srsf5b	84	75.969	Xiphophorus_maculatus