EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000010245 (Gene tree)
Gene ID: 103661292
Gene Symbol: DDX54
Alias: APR-5|DP97|MGC2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 23703 bases
Position: chrKK498575.1:8946044-8969746
Accession: 20084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000014458	DBP10CT	PF08147.12	2.8e-18	1	1
ENSUMAP00000014385	DBP10CT	PF08147.12	2.8e-18	1	1
ENSUMAP00000014416	DBP10CT	PF08147.12	2.9e-18	1	1
ENSUMAP00000014332	DBP10CT	PF08147.12	2.9e-18	1	1
ENSUMAP00000014436	DBP10CT	PF08147.12	3e-18	1	1
ENSUMAP00000014434	DBP10CT	PF08147.12	3.1e-18	1	1
ENSUMAP00000014454	DBP10CT	PF08147.12	2.7e-16	1	1
ENSUMAP00000014458	ResIII	PF04851.15	2.1e-06	1	1
ENSUMAP00000014416	ResIII	PF04851.15	2.1e-06	1	1
ENSUMAP00000014385	ResIII	PF04851.15	2.1e-06	1	1
ENSUMAP00000014454	ResIII	PF04851.15	2.3e-06	1	1
ENSUMAP00000014332	ResIII	PF04851.15	2.4e-06	1	1
ENSUMAP00000014436	ResIII	PF04851.15	2.5e-06	1	1
ENSUMAP00000014434	ResIII	PF04851.15	2.7e-06	1	1
ENSUMAP00000014454	DEAD	PF00270.29	1.8e-50	1	1
ENSUMAP00000014416	DEAD	PF00270.29	1.9e-50	1	1
ENSUMAP00000014458	DEAD	PF00270.29	2.2e-50	1	1
ENSUMAP00000014385	DEAD	PF00270.29	2.2e-50	1	1
ENSUMAP00000014332	DEAD	PF00270.29	2.2e-50	1	1
ENSUMAP00000014436	DEAD	PF00270.29	2.4e-50	1	1
ENSUMAP00000014434	DEAD	PF00270.29	2.6e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000017003	DDX54-201	2280	-	ENSUMAP00000014332	759 (aa)	-	-
ENSUMAT00000017147	DDX54-207	2262	-	ENSUMAP00000014458	753 (aa)	-	-
ENSUMAT00000017143	DDX54-206	2088	-	ENSUMAP00000014454	695 (aa)	-	-
ENSUMAT00000017124	DDX54-205	2358	-	ENSUMAP00000014436	785 (aa)	-	-
ENSUMAT00000017123	DDX54-204	2442	-	ENSUMAP00000014434	813 (aa)	-	-
ENSUMAT00000017061	DDX54-202	2292	-	ENSUMAP00000014385	763 (aa)	-	-
ENSUMAT00000017096	DDX54-203	2262	-	ENSUMAP00000014416	713 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000010245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000010245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000010245	DDX54	56	35.338	ENSUMAG00000012291	-	60	35.606
ENSUMAG00000010245	DDX54	50	30.435	ENSUMAG00000009666	DDX56	72	30.435
ENSUMAG00000010245	DDX54	54	32.095	ENSUMAG00000004240	EIF4A2	92	32.095
ENSUMAG00000010245	DDX54	52	37.398	ENSUMAG00000006489	DDX49	89	34.732
ENSUMAG00000010245	DDX54	56	31.002	ENSUMAG00000009291	DDX4	63	31.850
ENSUMAG00000010245	DDX54	50	42.017	ENSUMAG00000024473	DDX27	50	40.206
ENSUMAG00000010245	DDX54	50	35.530	ENSUMAG00000025376	DDX59	56	35.530
ENSUMAG00000010245	DDX54	54	30.334	ENSUMAG00000016558	-	93	30.412
ENSUMAG00000010245	DDX54	55	31.070	ENSUMAG00000000993	DDX6	80	31.202
ENSUMAG00000010245	DDX54	52	31.290	ENSUMAG00000004481	DDX24	51	31.290
ENSUMAG00000010245	DDX54	56	31.313	ENSUMAG00000014617	EIF4A3	99	32.768
ENSUMAG00000010245	DDX54	53	33.957	ENSUMAG00000002358	DDX47	83	33.506
ENSUMAG00000010245	DDX54	54	34.937	ENSUMAG00000013505	DDX18	57	34.848
ENSUMAG00000010245	DDX54	52	33.687	ENSUMAG00000024285	DDX41	63	33.418
ENSUMAG00000010245	DDX54	51	32.964	ENSUMAG00000017787	DDX5	61	32.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000010245	DDX54	95	93.963	ENSG00000123064	DDX54	100	95.673	Homo_sapiens
ENSUMAG00000010245	DDX54	94	80.952	ENSAPOG00000008602	ddx54	82	80.500	Acanthochromis_polyacanthus
ENSUMAG00000010245	DDX54	96	97.949	ENSAMEG00000008775	DDX54	80	98.519	Ailuropoda_melanoleuca
ENSUMAG00000010245	DDX54	95	80.779	ENSACIG00000019104	ddx54	80	81.250	Amphilophus_citrinellus
ENSUMAG00000010245	DDX54	94	80.423	ENSAOCG00000008449	ddx54	82	79.950	Amphiprion_ocellaris
ENSUMAG00000010245	DDX54	94	80.423	ENSAPEG00000014287	ddx54	82	79.950	Amphiprion_percula
ENSUMAG00000010245	DDX54	93	79.948	ENSATEG00000018529	ddx54	81	79.948	Anabas_testudineus
ENSUMAG00000010245	DDX54	95	86.667	ENSAPLG00000013191	DDX54	84	87.147	Anas_platyrhynchos
ENSUMAG00000010245	DDX54	94	85.455	ENSACAG00000004703	DDX54	84	83.951	Anolis_carolinensis
ENSUMAG00000010245	DDX54	95	80.872	ENSANAG00000032761	-	80	83.446	Aotus_nancymaae
ENSUMAG00000010245	DDX54	97	86.022	ENSANAG00000032241	-	83	86.080	Aotus_nancymaae
ENSUMAG00000010245	DDX54	89	80.990	ENSACLG00000013176	ddx54	82	81.250	Astatotilapia_calliptera
ENSUMAG00000010245	DDX54	93	80.052	ENSAMXG00000009189	ddx54	81	77.805	Astyanax_mexicanus
ENSUMAG00000010245	DDX54	95	95.567	ENSBTAG00000011930	DDX54	78	95.567	Bos_taurus
ENSUMAG00000010245	DDX54	95	55.172	WBGene00022378	Y94H6A.5	94	56.404	Caenorhabditis_elegans
ENSUMAG00000010245	DDX54	98	91.101	ENSCJAG00000010039	DDX54	85	89.908	Callithrix_jacchus
ENSUMAG00000010245	DDX54	63	95.652	ENSCAFG00000009029	DDX54	87	96.774	Canis_familiaris
ENSUMAG00000010245	DDX54	95	96.594	ENSCAFG00020017643	DDX54	83	96.594	Canis_lupus_dingo
ENSUMAG00000010245	DDX54	96	90.746	ENSCHIG00000026798	DDX54	87	86.036	Capra_hircus
ENSUMAG00000010245	DDX54	96	85.861	ENSTSYG00000007898	DDX54	81	86.634	Carlito_syrichta
ENSUMAG00000010245	DDX54	96	92.308	ENSCAPG00000001482	DDX54	85	93.548	Cavia_aperea
ENSUMAG00000010245	DDX54	95	94.226	ENSCPOG00000020649	DDX54	86	88.356	Cavia_porcellus
ENSUMAG00000010245	DDX54	95	93.963	ENSCCAG00000022625	DDX54	86	89.041	Cebus_capucinus
ENSUMAG00000010245	DDX54	96	92.564	ENSCATG00000041943	DDX54	83	90.632	Cercocebus_atys
ENSUMAG00000010245	DDX54	96	92.802	ENSCLAG00000010748	DDX54	83	91.525	Chinchilla_lanigera
ENSUMAG00000010245	DDX54	96	92.051	ENSCSAG00000002432	DDX54	80	93.000	Chlorocebus_sabaeus
ENSUMAG00000010245	DDX54	76	83.534	ENSCPBG00000017982	DDX54	70	83.539	Chrysemys_picta_bellii
ENSUMAG00000010245	DDX54	90	67.866	ENSCING00000004789	-	84	67.866	Ciona_intestinalis
ENSUMAG00000010245	DDX54	94	70.079	ENSCSAVG00000008916	-	98	68.373	Ciona_savignyi
ENSUMAG00000010245	DDX54	89	95.735	ENSCANG00000020637	DDX54	85	95.763	Colobus_angolensis_palliatus
ENSUMAG00000010245	DDX54	93	94.026	ENSCGRG00001014803	Ddx54	88	88.303	Cricetulus_griseus_chok1gshd
ENSUMAG00000010245	DDX54	93	94.026	ENSCGRG00000002827	Ddx54	88	88.303	Cricetulus_griseus_crigri
ENSUMAG00000010245	DDX54	94	78.442	ENSCSEG00000016462	ddx54	81	78.385	Cynoglossus_semilaevis
ENSUMAG00000010245	DDX54	94	80.688	ENSCVAG00000022404	ddx54	82	80.000	Cyprinodon_variegatus
ENSUMAG00000010245	DDX54	95	82.078	ENSDARG00000105286	ddx54	82	81.750	Danio_rerio
ENSUMAG00000010245	DDX54	95	92.448	ENSDNOG00000032913	DDX54	80	92.118	Dasypus_novemcinctus
ENSUMAG00000010245	DDX54	82	85.473	ENSDORG00000003399	Ddx54	76	93.411	Dipodomys_ordii
ENSUMAG00000010245	DDX54	87	64.578	FBgn0052344	CG32344	82	55.724	Drosophila_melanogaster
ENSUMAG00000010245	DDX54	82	74.485	ENSEBUG00000008886	ddx54	84	72.087	Eptatretus_burgeri
ENSUMAG00000010245	DDX54	88	93.731	ENSEASG00005009501	DDX54	78	94.753	Equus_asinus_asinus
ENSUMAG00000010245	DDX54	96	95.325	ENSECAG00000012890	DDX54	80	95.792	Equus_caballus
ENSUMAG00000010245	DDX54	59	94.937	ENSEEUG00000008296	-	57	94.937	Erinaceus_europaeus
ENSUMAG00000010245	DDX54	95	81.088	ENSELUG00000013533	ddx54	83	80.147	Esox_lucius
ENSUMAG00000010245	DDX54	96	95.385	ENSFCAG00000027806	DDX54	83	95.157	Felis_catus
ENSUMAG00000010245	DDX54	95	85.714	ENSFALG00000007737	DDX54	86	85.714	Ficedula_albicollis
ENSUMAG00000010245	DDX54	96	86.637	ENSFDAG00000019953	DDX54	88	85.143	Fukomys_damarensis
ENSUMAG00000010245	DDX54	95	56.608	ENSFHEG00000018425	ddx54	93	56.070	Fundulus_heteroclitus
ENSUMAG00000010245	DDX54	91	78.537	ENSGMOG00000011746	ddx54	86	78.729	Gadus_morhua
ENSUMAG00000010245	DDX54	95	86.877	ENSGALG00000007490	DDX54	84	83.051	Gallus_gallus
ENSUMAG00000010245	DDX54	95	57.143	ENSGAFG00000010336	ddx54	81	79.653	Gambusia_affinis
ENSUMAG00000010245	DDX54	95	78.961	ENSGACG00000016793	ddx54	81	78.906	Gasterosteus_aculeatus
ENSUMAG00000010245	DDX54	95	86.494	ENSGAGG00000022803	DDX54	86	86.528	Gopherus_agassizii
ENSUMAG00000010245	DDX54	95	94.459	ENSGGOG00000010414	DDX54	83	91.101	Gorilla_gorilla
ENSUMAG00000010245	DDX54	96	94.026	ENSHGLG00000014411	DDX54	84	91.827	Heterocephalus_glaber_female
ENSUMAG00000010245	DDX54	96	93.077	ENSHGLG00100018511	DDX54	84	91.807	Heterocephalus_glaber_male
ENSUMAG00000010245	DDX54	92	77.240	ENSHCOG00000019287	ddx54	81	78.718	Hippocampus_comes
ENSUMAG00000010245	DDX54	93	80.688	ENSIPUG00000015556	Ddx54	82	79.800	Ictalurus_punctatus
ENSUMAG00000010245	DDX54	92	92.818	ENSSTOG00000004068	DDX54	90	93.732	Ictidomys_tridecemlineatus
ENSUMAG00000010245	DDX54	96	94.026	ENSJJAG00000015712	Ddx54	78	94.286	Jaculus_jaculus
ENSUMAG00000010245	DDX54	94	79.894	ENSKMAG00000017520	ddx54	81	78.643	Kryptolebias_marmoratus
ENSUMAG00000010245	DDX54	94	79.156	ENSLBEG00000019480	ddx54	82	78.055	Labrus_bergylta
ENSUMAG00000010245	DDX54	94	82.677	ENSLACG00000008944	DDX54	78	81.864	Latimeria_chalumnae
ENSUMAG00000010245	DDX54	94	82.011	ENSLOCG00000008485	ddx54	86	80.798	Lepisosteus_oculatus
ENSUMAG00000010245	DDX54	93	76.052	ENSLAFG00000027782	DDX54	85	76.825	Loxodonta_africana
ENSUMAG00000010245	DDX54	96	92.564	ENSMFAG00000043636	DDX54	85	90.443	Macaca_fascicularis
ENSUMAG00000010245	DDX54	96	92.308	ENSMMUG00000021795	DDX54	85	90.210	Macaca_mulatta
ENSUMAG00000010245	DDX54	96	80.268	ENSMNEG00000043605	DDX54	83	79.557	Macaca_nemestrina
ENSUMAG00000010245	DDX54	96	84.103	ENSMLEG00000038981	DDX54	85	82.944	Mandrillus_leucophaeus
ENSUMAG00000010245	DDX54	94	80.519	ENSMAMG00000012784	ddx54	83	79.902	Mastacembelus_armatus
ENSUMAG00000010245	DDX54	89	81.250	ENSMZEG00005018773	ddx54	81	81.500	Maylandia_zebra
ENSUMAG00000010245	DDX54	95	86.089	ENSMGAG00000009183	DDX54	82	86.089	Meleagris_gallopavo
ENSUMAG00000010245	DDX54	92	92.978	ENSMAUG00000011051	Ddx54	83	93.382	Mesocricetus_auratus
ENSUMAG00000010245	DDX54	96	92.821	ENSMICG00000012217	DDX54	80	93.596	Microcebus_murinus
ENSUMAG00000010245	DDX54	95	92.308	ENSMOCG00000010835	Ddx54	85	93.103	Microtus_ochrogaster
ENSUMAG00000010245	DDX54	95	78.061	ENSMMOG00000009634	ddx54	80	78.906	Mola_mola
ENSUMAG00000010245	DDX54	95	89.764	ENSMODG00000003413	DDX54	85	86.199	Monodelphis_domestica
ENSUMAG00000010245	DDX54	90	79.126	ENSMALG00000022098	ddx54	84	76.498	Monopterus_albus
ENSUMAG00000010245	DDX54	95	93.590	MGP_CAROLIEiJ_G0027665	Ddx54	88	88.991	Mus_caroli
ENSUMAG00000010245	DDX54	93	94.026	ENSMUSG00000029599	Ddx54	84	88.761	Mus_musculus
ENSUMAG00000010245	DDX54	95	93.590	MGP_PahariEiJ_G0024247	Ddx54	88	88.991	Mus_pahari
ENSUMAG00000010245	DDX54	93	94.286	MGP_SPRETEiJ_G0028665	Ddx54	88	88.991	Mus_spretus
ENSUMAG00000010245	DDX54	96	96.410	ENSMPUG00000002574	DDX54	84	95.433	Mustela_putorius_furo
ENSUMAG00000010245	DDX54	51	92.697	ENSMLUG00000004684	-	100	93.280	Myotis_lucifugus
ENSUMAG00000010245	DDX54	96	92.802	ENSNGAG00000021313	Ddx54	90	86.801	Nannospalax_galili
ENSUMAG00000010245	DDX54	60	81.322	ENSNBRG00000005588	ddx54	65	81.148	Neolamprologus_brichardi
ENSUMAG00000010245	DDX54	96	92.802	ENSNLEG00000000162	DDX54	83	90.632	Nomascus_leucogenys
ENSUMAG00000010245	DDX54	88	87.332	ENSMEUG00000015392	DDX54	88	88.122	Notamacropus_eugenii
ENSUMAG00000010245	DDX54	84	94.352	ENSOPRG00000012000	DDX54	73	94.352	Ochotona_princeps
ENSUMAG00000010245	DDX54	95	91.076	ENSODEG00000014863	DDX54	82	88.889	Octodon_degus
ENSUMAG00000010245	DDX54	96	90.746	ENSOCUG00000008932	DDX54	80	89.901	Oryctolagus_cuniculus
ENSUMAG00000010245	DDX54	94	79.894	ENSORLG00000007385	ddx54	81	79.500	Oryzias_latipes
ENSUMAG00000010245	DDX54	94	80.159	ENSORLG00020000858	ddx54	81	79.750	Oryzias_latipes_hni
ENSUMAG00000010245	DDX54	94	80.159	ENSORLG00015006956	ddx54	81	79.750	Oryzias_latipes_hsok
ENSUMAG00000010245	DDX54	93	80.688	ENSOMEG00000003663	ddx54	82	79.750	Oryzias_melastigma
ENSUMAG00000010245	DDX54	96	94.859	ENSOGAG00000004210	DDX54	83	94.673	Otolemur_garnettii
ENSUMAG00000010245	DDX54	84	95.511	ENSOARG00000008363	DDX54	78	95.511	Ovis_aries
ENSUMAG00000010245	DDX54	95	93.963	ENSPPAG00000042178	DDX54	83	90.867	Pan_paniscus
ENSUMAG00000010245	DDX54	96	90.769	ENSPPRG00000005223	DDX54	80	92.346	Panthera_pardus
ENSUMAG00000010245	DDX54	79	96.891	ENSPTIG00000019728	DDX54	85	96.891	Panthera_tigris_altaica
ENSUMAG00000010245	DDX54	95	93.963	ENSPTRG00000005483	DDX54	83	90.867	Pan_troglodytes
ENSUMAG00000010245	DDX54	96	92.821	ENSPANG00000008883	DDX54	85	90.676	Papio_anubis
ENSUMAG00000010245	DDX54	94	81.081	ENSPKIG00000018272	ddx54	82	81.081	Paramormyrops_kingsleyae
ENSUMAG00000010245	DDX54	55	85.752	ENSPSIG00000005055	DDX54	80	85.714	Pelodiscus_sinensis
ENSUMAG00000010245	DDX54	90	58.466	ENSPMGG00000010988	ddx54	94	58.792	Periophthalmus_magnuspinnatus
ENSUMAG00000010245	DDX54	95	93.590	ENSPEMG00000016701	Ddx54	83	93.137	Peromyscus_maniculatus_bairdii
ENSUMAG00000010245	DDX54	56	78.093	ENSPMAG00000004337	ddx54	99	78.372	Petromyzon_marinus
ENSUMAG00000010245	DDX54	94	80.159	ENSPFOG00000019822	ddx54	80	80.250	Poecilia_formosa
ENSUMAG00000010245	DDX54	94	79.894	ENSPLAG00000004530	ddx54	80	80.000	Poecilia_latipinna
ENSUMAG00000010245	DDX54	94	79.630	ENSPMEG00000010803	ddx54	80	79.750	Poecilia_mexicana
ENSUMAG00000010245	DDX54	94	79.630	ENSPREG00000014372	ddx54	82	79.500	Poecilia_reticulata
ENSUMAG00000010245	DDX54	96	93.316	ENSPPYG00000004984	DDX54	83	91.335	Pongo_abelii
ENSUMAG00000010245	DDX54	97	80.653	ENSPCAG00000008462	DDX54	85	80.841	Procavia_capensis
ENSUMAG00000010245	DDX54	96	93.333	ENSPCOG00000006050	DDX54	80	94.335	Propithecus_coquereli
ENSUMAG00000010245	DDX54	89	95.370	ENSPVAG00000017347	DDX54	75	95.370	Pteropus_vampyrus
ENSUMAG00000010245	DDX54	90	81.890	ENSPNAG00000014459	ddx54	83	80.590	Pygocentrus_nattereri
ENSUMAG00000010245	DDX54	95	94.026	ENSRNOG00000001377	Ddx54	80	88.532	Rattus_norvegicus
ENSUMAG00000010245	DDX54	96	92.308	ENSRBIG00000032535	DDX54	83	90.824	Rhinopithecus_bieti
ENSUMAG00000010245	DDX54	96	84.143	ENSRROG00000029557	DDX54	82	83.372	Rhinopithecus_roxellana
ENSUMAG00000010245	DDX54	96	92.821	ENSSBOG00000028194	DDX54	84	88.662	Saimiri_boliviensis_boliviensis
ENSUMAG00000010245	DDX54	95	89.770	ENSSHAG00000015646	DDX54	87	87.923	Sarcophilus_harrisii
ENSUMAG00000010245	DDX54	95	81.746	ENSSFOG00015014981	ddx54	81	81.047	Scleropages_formosus
ENSUMAG00000010245	DDX54	94	78.042	ENSSMAG00000003210	ddx54	82	77.057	Scophthalmus_maximus
ENSUMAG00000010245	DDX54	94	79.894	ENSSDUG00000004474	ddx54	82	79.500	Seriola_dumerili
ENSUMAG00000010245	DDX54	94	79.894	ENSSLDG00000010380	ddx54	82	79.000	Seriola_lalandi_dorsalis
ENSUMAG00000010245	DDX54	95	85.974	ENSSPUG00000014141	DDX54	82	82.169	Sphenodon_punctatus
ENSUMAG00000010245	DDX54	93	75.385	ENSSPAG00000022918	ddx54	87	72.960	Stegastes_partitus
ENSUMAG00000010245	DDX54	96	94.103	ENSSSCG00000009876	DDX54	83	94.634	Sus_scrofa
ENSUMAG00000010245	DDX54	95	83.805	ENSTGUG00000009126	DDX54	85	84.062	Taeniopygia_guttata
ENSUMAG00000010245	DDX54	89	79.948	ENSTRUG00000014939	ddx54	81	79.948	Takifugu_rubripes
ENSUMAG00000010245	DDX54	94	79.481	ENSTNIG00000009037	ddx54	82	78.571	Tetraodon_nigroviridis
ENSUMAG00000010245	DDX54	93	91.768	ENSTBEG00000003783	DDX54	78	91.768	Tupaia_belangeri
ENSUMAG00000010245	DDX54	96	87.887	ENSTTRG00000016678	DDX54	86	84.439	Tursiops_truncatus
ENSUMAG00000010245	DDX54	96	99.744	ENSUAMG00000028387	DDX54	85	97.980	Ursus_americanus
ENSUMAG00000010245	DDX54	95	96.594	ENSVVUG00000010212	DDX54	83	96.594	Vulpes_vulpes
ENSUMAG00000010245	DDX54	94	83.029	ENSXETG00000016410	ddx54	81	81.841	Xenopus_tropicalis
ENSUMAG00000010245	DDX54	94	80.423	ENSXCOG00000002909	ddx54	82	80.250	Xiphophorus_couchianus
ENSUMAG00000010245	DDX54	94	80.423	ENSXMAG00000005312	ddx54	82	80.250	Xiphophorus_maculatus