EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000010393 (Gene tree)
Gene ID: 103672840
Gene Symbol: HTATSF1
Alias: -
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 15413 bases
Position: chrKK498666.1:511653-527065
Accession: 103672840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000014118	RRM_1	PF00076.22	2.1e-16	1	2
ENSUMAP00000014118	RRM_1	PF00076.22	2.1e-16	2	2
ENSUMAP00000014123	RRM_1	PF00076.22	4.3e-14	1	2
ENSUMAP00000014123	RRM_1	PF00076.22	4.3e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000016754	HTATSF1-202	2567	-	ENSUMAP00000014123	737 (aa)	XP_008699764	UPI0004E02B18
ENSUMAT00000016747	HTATSF1-201	2657	-	ENSUMAP00000014118	767 (aa)	XP_008699763	UPI0004DFD8BD

Gene Model

Click here to download ENSUMAG00000010393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000010393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000010393	HTATSF1	99	81.558	ENSG00000102241	HTATSF1	100	90.984	Homo_sapiens
ENSUMAG00000010393	HTATSF1	53	60.471	ENSAPOG00000009823	htatsf1	92	60.235	Acanthochromis_polyacanthus
ENSUMAG00000010393	HTATSF1	100	98.827	ENSAMEG00000002921	HTATSF1	100	98.827	Ailuropoda_melanoleuca
ENSUMAG00000010393	HTATSF1	93	76.204	ENSANAG00000025458	-	99	75.653	Aotus_nancymaae
ENSUMAG00000010393	HTATSF1	95	68.733	ENSANAG00000027986	-	97	68.464	Aotus_nancymaae
ENSUMAG00000010393	HTATSF1	53	59.535	ENSACLG00000008096	htatsf1	96	58.239	Astatotilapia_calliptera
ENSUMAG00000010393	HTATSF1	99	73.281	ENSBTAG00000032711	HTATSF1	99	76.295	Bos_taurus
ENSUMAG00000010393	HTATSF1	99	82.575	ENSBTAG00000055212	HTATSF1	99	83.634	Bos_taurus
ENSUMAG00000010393	HTATSF1	99	82.575	ENSBTAG00000054942	HTATSF1	99	83.634	Bos_taurus
ENSUMAG00000010393	HTATSF1	99	79.587	ENSCJAG00000003676	HTATSF1	99	78.682	Callithrix_jacchus
ENSUMAG00000010393	HTATSF1	99	95.144	ENSCAFG00000023294	HTATSF1	99	95.052	Canis_familiaris
ENSUMAG00000010393	HTATSF1	99	95.276	ENSCAFG00020024635	HTATSF1	99	95.182	Canis_lupus_dingo
ENSUMAG00000010393	HTATSF1	99	82.055	ENSCHIG00000000312	HTATSF1	99	83.226	Capra_hircus
ENSUMAG00000010393	HTATSF1	99	81.169	ENSTSYG00000028876	HTATSF1	99	81.057	Carlito_syrichta
ENSUMAG00000010393	HTATSF1	99	76.863	ENSCCAG00000025329	-	100	76.863	Cebus_capucinus
ENSUMAG00000010393	HTATSF1	99	79.690	ENSCCAG00000022701	-	99	79.172	Cebus_capucinus
ENSUMAG00000010393	HTATSF1	99	81.380	ENSCATG00000029963	HTATSF1	99	81.548	Cercocebus_atys
ENSUMAG00000010393	HTATSF1	100	72.506	ENSCLAG00000002718	HTATSF1	100	72.599	Chinchilla_lanigera
ENSUMAG00000010393	HTATSF1	99	81.380	ENSCSAG00000007505	HTATSF1	99	81.548	Chlorocebus_sabaeus
ENSUMAG00000010393	HTATSF1	99	81.120	ENSCANG00000028495	HTATSF1	99	81.419	Colobus_angolensis_palliatus
ENSUMAG00000010393	HTATSF1	82	79.621	ENSCGRG00001021602	Htatsf1	99	75.285	Cricetulus_griseus_chok1gshd
ENSUMAG00000010393	HTATSF1	74	72.632	ENSCGRG00000002085	Htatsf1	99	69.284	Cricetulus_griseus_crigri
ENSUMAG00000010393	HTATSF1	51	59.250	ENSDARG00000056649	htatsf1	98	54.705	Danio_rerio
ENSUMAG00000010393	HTATSF1	99	80.754	ENSDNOG00000002254	HTATSF1	100	80.928	Dasypus_novemcinctus
ENSUMAG00000010393	HTATSF1	82	50.000	ENSETEG00000006377	-	73	48.201	Echinops_telfairi
ENSUMAG00000010393	HTATSF1	99	84.987	ENSEASG00005003440	HTATSF1	99	84.845	Equus_asinus_asinus
ENSUMAG00000010393	HTATSF1	99	84.987	ENSECAG00000009156	HTATSF1	99	84.845	Equus_caballus
ENSUMAG00000010393	HTATSF1	93	91.166	ENSEEUG00000010668	HTATSF1	89	91.166	Erinaceus_europaeus
ENSUMAG00000010393	HTATSF1	99	93.211	ENSFCAG00000031924	HTATSF1	99	93.211	Felis_catus
ENSUMAG00000010393	HTATSF1	50	68.193	ENSFALG00000003728	HTATSF1	87	67.990	Ficedula_albicollis
ENSUMAG00000010393	HTATSF1	99	74.316	ENSFDAG00000008617	HTATSF1	99	74.581	Fukomys_damarensis
ENSUMAG00000010393	HTATSF1	53	58.588	ENSGACG00000020459	htatsf1	97	57.437	Gasterosteus_aculeatus
ENSUMAG00000010393	HTATSF1	99	81.818	ENSGGOG00000026072	HTATSF1	100	81.725	Gorilla_gorilla
ENSUMAG00000010393	HTATSF1	53	59.535	ENSHBUG00000004392	htatsf1	96	58.239	Haplochromis_burtoni
ENSUMAG00000010393	HTATSF1	98	74.413	ENSHGLG00000005328	HTATSF1	99	74.550	Heterocephalus_glaber_female
ENSUMAG00000010393	HTATSF1	99	81.510	ENSSTOG00000012505	HTATSF1	99	81.654	Ictidomys_tridecemlineatus
ENSUMAG00000010393	HTATSF1	55	59.775	ENSKMAG00000007622	htatsf1	97	59.459	Kryptolebias_marmoratus
ENSUMAG00000010393	HTATSF1	99	71.485	ENSLAFG00000014307	HTATSF1	100	70.013	Loxodonta_africana
ENSUMAG00000010393	HTATSF1	99	81.250	ENSMFAG00000044705	HTATSF1	99	81.419	Macaca_fascicularis
ENSUMAG00000010393	HTATSF1	99	81.250	ENSMMUG00000006450	HTATSF1	99	81.419	Macaca_mulatta
ENSUMAG00000010393	HTATSF1	99	74.089	ENSMNEG00000024084	HTATSF1	99	74.710	Macaca_nemestrina
ENSUMAG00000010393	HTATSF1	99	81.250	ENSMLEG00000035511	HTATSF1	99	81.419	Mandrillus_leucophaeus
ENSUMAG00000010393	HTATSF1	53	59.535	ENSMZEG00005000485	htatsf1	96	58.239	Maylandia_zebra
ENSUMAG00000010393	HTATSF1	99	72.890	ENSMAUG00000007235	Htatsf1	99	73.436	Mesocricetus_auratus
ENSUMAG00000010393	HTATSF1	99	81.113	ENSMICG00000009348	HTATSF1	100	79.949	Microcebus_murinus
ENSUMAG00000010393	HTATSF1	99	71.934	ENSMOCG00000023007	-	99	71.429	Microtus_ochrogaster
ENSUMAG00000010393	HTATSF1	99	70.866	ENSMOCG00000022370	-	96	69.271	Microtus_ochrogaster
ENSUMAG00000010393	HTATSF1	50	71.279	ENSMODG00000014087	-	84	71.279	Monodelphis_domestica
ENSUMAG00000010393	HTATSF1	53	57.870	ENSMALG00000019977	htatsf1	94	57.870	Monopterus_albus
ENSUMAG00000010393	HTATSF1	99	70.051	MGP_CAROLIEiJ_G0033094	Htatsf1	99	70.558	Mus_caroli
ENSUMAG00000010393	HTATSF1	98	71.300	ENSMUSG00000067873	Htatsf1	99	72.669	Mus_musculus
ENSUMAG00000010393	HTATSF1	98	71.171	MGP_SPRETEiJ_G0034249	Htatsf1	99	72.542	Mus_spretus
ENSUMAG00000010393	HTATSF1	100	94.010	ENSMPUG00000001901	HTATSF1	100	94.271	Mustela_putorius_furo
ENSUMAG00000010393	HTATSF1	99	72.432	ENSMLUG00000009234	-	100	71.775	Myotis_lucifugus
ENSUMAG00000010393	HTATSF1	99	77.243	ENSMLUG00000028418	-	99	77.062	Myotis_lucifugus
ENSUMAG00000010393	HTATSF1	99	72.751	ENSNGAG00000017831	Htatsf1	99	73.385	Nannospalax_galili
ENSUMAG00000010393	HTATSF1	99	81.169	ENSNLEG00000002746	HTATSF1	99	80.928	Nomascus_leucogenys
ENSUMAG00000010393	HTATSF1	51	69.521	ENSMEUG00000004133	-	95	69.270	Notamacropus_eugenii
ENSUMAG00000010393	HTATSF1	53	60.460	ENSONIG00000008638	htatsf1	96	59.101	Oreochromis_niloticus
ENSUMAG00000010393	HTATSF1	99	76.508	ENSOCUG00000012570	HTATSF1	100	78.581	Oryctolagus_cuniculus
ENSUMAG00000010393	HTATSF1	54	58.314	ENSOMEG00000007564	htatsf1	95	58.636	Oryzias_melastigma
ENSUMAG00000010393	HTATSF1	98	76.893	ENSOGAG00000005565	HTATSF1	100	77.593	Otolemur_garnettii
ENSUMAG00000010393	HTATSF1	99	79.351	ENSOARG00000000481	-	99	79.221	Ovis_aries
ENSUMAG00000010393	HTATSF1	99	82.185	ENSOARG00000011215	-	99	83.355	Ovis_aries
ENSUMAG00000010393	HTATSF1	99	81.948	ENSPPAG00000024268	HTATSF1	100	81.853	Pan_paniscus
ENSUMAG00000010393	HTATSF1	99	91.775	ENSPPRG00000014209	HTATSF1	99	91.775	Panthera_pardus
ENSUMAG00000010393	HTATSF1	93	90.999	ENSPTIG00000016887	HTATSF1	96	90.999	Panthera_tigris_altaica
ENSUMAG00000010393	HTATSF1	99	81.948	ENSPTRG00000044591	HTATSF1	100	81.853	Pan_troglodytes
ENSUMAG00000010393	HTATSF1	99	70.052	ENSPANG00000010946	HTATSF1	99	69.961	Papio_anubis
ENSUMAG00000010393	HTATSF1	98	73.506	ENSPEMG00000022397	Htatsf1	99	73.180	Peromyscus_maniculatus_bairdii
ENSUMAG00000010393	HTATSF1	51	65.990	ENSPCIG00000018896	-	88	65.990	Phascolarctos_cinereus
ENSUMAG00000010393	HTATSF1	50	61.728	ENSPLAG00000007532	htatsf1	89	61.728	Poecilia_latipinna
ENSUMAG00000010393	HTATSF1	88	82.101	ENSPPYG00000020765	HTATSF1	82	83.386	Pongo_abelii
ENSUMAG00000010393	HTATSF1	98	66.095	ENSPCAG00000010576	HTATSF1	99	66.319	Procavia_capensis
ENSUMAG00000010393	HTATSF1	99	81.218	ENSPCOG00000021823	HTATSF1	99	81.088	Propithecus_coquereli
ENSUMAG00000010393	HTATSF1	99	73.177	ENSPVAG00000010281	HTATSF1	99	71.798	Pteropus_vampyrus
ENSUMAG00000010393	HTATSF1	53	59.767	ENSPNYG00000016693	htatsf1	96	58.465	Pundamilia_nyererei
ENSUMAG00000010393	HTATSF1	55	57.609	ENSPNAG00000006166	htatsf1	95	59.624	Pygocentrus_nattereri
ENSUMAG00000010393	HTATSF1	99	73.436	ENSRNOG00000027761	Htatsf1	99	74.330	Rattus_norvegicus
ENSUMAG00000010393	HTATSF1	99	70.703	ENSRBIG00000035486	HTATSF1	99	70.839	Rhinopithecus_bieti
ENSUMAG00000010393	HTATSF1	99	80.599	ENSRROG00000021939	HTATSF1	99	80.903	Rhinopithecus_roxellana
ENSUMAG00000010393	HTATSF1	99	75.938	ENSSBOG00000017914	-	100	75.420	Saimiri_boliviensis_boliviensis
ENSUMAG00000010393	HTATSF1	99	78.646	ENSSBOG00000027186	-	99	77.806	Saimiri_boliviensis_boliviensis
ENSUMAG00000010393	HTATSF1	50	68.123	ENSSHAG00000006440	-	99	68.123	Sarcophilus_harrisii
ENSUMAG00000010393	HTATSF1	53	57.931	ENSSMAG00000002970	htatsf1	94	58.124	Scophthalmus_maximus
ENSUMAG00000010393	HTATSF1	53	57.373	ENSSLDG00000016880	htatsf1	96	56.621	Seriola_lalandi_dorsalis
ENSUMAG00000010393	HTATSF1	99	64.369	ENSSARG00000005193	HTATSF1	99	64.239	Sorex_araneus
ENSUMAG00000010393	HTATSF1	99	73.609	ENSSSCG00000023062	HTATSF1	99	74.198	Sus_scrofa
ENSUMAG00000010393	HTATSF1	50	63.250	ENSTNIG00000016140	htatsf1	87	63.776	Tetraodon_nigroviridis
ENSUMAG00000010393	HTATSF1	86	73.788	ENSTTRG00000002269	HTATSF1	99	73.485	Tursiops_truncatus
ENSUMAG00000010393	HTATSF1	100	97.784	ENSUAMG00000012048	HTATSF1	100	97.784	Ursus_americanus
ENSUMAG00000010393	HTATSF1	92	76.955	ENSVPAG00000004569	HTATSF1	100	76.816	Vicugna_pacos
ENSUMAG00000010393	HTATSF1	99	94.882	ENSVVUG00000024802	HTATSF1	99	94.792	Vulpes_vulpes