EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000010869 (Gene tree)
Gene ID: 103665470
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 12903 bases
Position: chrKK498610.1:3671015-3683917
Accession: 11157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000014773	zf-U1	PF06220.12	1.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000017509	SNRPC-201	778	-	ENSUMAP00000014773	178 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000010869's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000010869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000010869	SNRPC	100	89.326	ENSG00000124562	SNRPC	100	89.326	Homo_sapiens
ENSUMAG00000010869	SNRPC	99	88.636	ENSAMEG00000000963	SNRPC	87	88.636	Ailuropoda_melanoleuca
ENSUMAG00000010869	SNRPC	99	86.364	ENSACAG00000015721	SNRPC	87	86.364	Anolis_carolinensis
ENSUMAG00000010869	SNRPC	100	75.281	ENSANAG00000019726	-	92	77.528	Aotus_nancymaae
ENSUMAG00000010869	SNRPC	100	67.978	ENSANAG00000021444	-	61	83.333	Aotus_nancymaae
ENSUMAG00000010869	SNRPC	99	81.921	ENSANAG00000020588	-	92	69.945	Aotus_nancymaae
ENSUMAG00000010869	SNRPC	100	88.764	ENSANAG00000007843	-	100	88.764	Aotus_nancymaae
ENSUMAG00000010869	SNRPC	100	75.281	ENSANAG00000021026	-	92	77.528	Aotus_nancymaae
ENSUMAG00000010869	SNRPC	100	73.596	ENSANAG00000019157	-	100	72.283	Aotus_nancymaae
ENSUMAG00000010869	SNRPC	100	89.326	ENSANAG00000019696	-	100	89.326	Aotus_nancymaae
ENSUMAG00000010869	SNRPC	100	98.876	ENSBTAG00000024549	SNRPC	100	98.876	Bos_taurus
ENSUMAG00000010869	SNRPC	100	88.202	ENSCJAG00000043055	-	100	88.202	Callithrix_jacchus
ENSUMAG00000010869	SNRPC	100	87.079	ENSCJAG00000041822	-	100	87.079	Callithrix_jacchus
ENSUMAG00000010869	SNRPC	100	89.326	ENSCJAG00000015321	-	100	89.326	Callithrix_jacchus
ENSUMAG00000010869	SNRPC	66	100.000	ENSCAFG00000001231	-	93	100.000	Canis_familiaris
ENSUMAG00000010869	SNRPC	100	81.461	ENSCAFG00000031775	-	100	74.719	Canis_familiaris
ENSUMAG00000010869	SNRPC	100	88.202	ENSCAFG00000028988	-	100	88.202	Canis_familiaris
ENSUMAG00000010869	SNRPC	100	89.326	ENSCAFG00020005945	-	100	89.326	Canis_lupus_dingo
ENSUMAG00000010869	SNRPC	100	98.315	ENSCAFG00020026577	-	100	98.315	Canis_lupus_dingo
ENSUMAG00000010869	SNRPC	100	81.461	ENSCAFG00020017383	-	100	74.719	Canis_lupus_dingo
ENSUMAG00000010869	SNRPC	100	82.022	ENSCAFG00020005758	-	99	73.077	Canis_lupus_dingo
ENSUMAG00000010869	SNRPC	99	75.568	ENSCAFG00020009944	-	54	88.298	Canis_lupus_dingo
ENSUMAG00000010869	SNRPC	100	65.169	ENSCHIG00000005039	-	100	56.522	Capra_hircus
ENSUMAG00000010869	SNRPC	100	88.764	ENSCHIG00000012087	-	100	88.764	Capra_hircus
ENSUMAG00000010869	SNRPC	98	76.571	ENSTSYG00000029745	-	50	94.000	Carlito_syrichta
ENSUMAG00000010869	SNRPC	100	62.360	ENSTSYG00000025721	-	100	55.435	Carlito_syrichta
ENSUMAG00000010869	SNRPC	100	89.326	ENSTSYG00000011216	-	100	89.326	Carlito_syrichta
ENSUMAG00000010869	SNRPC	90	88.199	ENSCAPG00000005161	SNRPC	100	88.199	Cavia_aperea
ENSUMAG00000010869	SNRPC	100	89.326	ENSCPOG00000008563	SNRPC	100	89.326	Cavia_porcellus
ENSUMAG00000010869	SNRPC	98	67.429	ENSCCAG00000022209	-	95	60.571	Cebus_capucinus
ENSUMAG00000010869	SNRPC	98	81.714	ENSCCAG00000022751	-	95	74.286	Cebus_capucinus
ENSUMAG00000010869	SNRPC	100	80.899	ENSCCAG00000036059	-	89	71.739	Cebus_capucinus
ENSUMAG00000010869	SNRPC	100	89.326	ENSCATG00000035787	SNRPC	100	89.326	Cercocebus_atys
ENSUMAG00000010869	SNRPC	100	89.326	ENSCLAG00000016920	SNRPC	100	89.326	Chinchilla_lanigera
ENSUMAG00000010869	SNRPC	99	72.727	ENSCLAG00000010242	-	58	84.211	Chinchilla_lanigera
ENSUMAG00000010869	SNRPC	100	98.876	ENSCSAG00000009821	SNRPC	100	98.876	Chlorocebus_sabaeus
ENSUMAG00000010869	SNRPC	100	87.079	ENSCPBG00000027142	SNRPC	100	87.079	Chrysemys_picta_bellii
ENSUMAG00000010869	SNRPC	100	89.326	ENSCANG00000028035	SNRPC	100	89.326	Colobus_angolensis_palliatus
ENSUMAG00000010869	SNRPC	100	88.764	ENSCGRG00001009011	-	100	88.764	Cricetulus_griseus_chok1gshd
ENSUMAG00000010869	SNRPC	100	74.157	ENSCGRG00001021483	-	100	65.730	Cricetulus_griseus_chok1gshd
ENSUMAG00000010869	SNRPC	99	88.068	ENSCGRG00000005005	Snrpc	99	88.068	Cricetulus_griseus_crigri
ENSUMAG00000010869	SNRPC	67	99.167	ENSDNOG00000042403	-	95	99.167	Dasypus_novemcinctus
ENSUMAG00000010869	SNRPC	100	88.202	ENSDNOG00000034699	-	99	88.202	Dasypus_novemcinctus
ENSUMAG00000010869	SNRPC	100	98.876	ENSEASG00005021007	SNRPC	100	98.876	Equus_asinus_asinus
ENSUMAG00000010869	SNRPC	100	98.876	ENSECAG00000026848	SNRPC	100	98.876	Equus_caballus
ENSUMAG00000010869	SNRPC	53	87.234	ENSELUG00000000815	SNRPC	50	94.872	Esox_lucius
ENSUMAG00000010869	SNRPC	54	98.958	ENSFCAG00000031775	-	56	98.958	Felis_catus
ENSUMAG00000010869	SNRPC	100	89.326	ENSFCAG00000044077	-	100	89.326	Felis_catus
ENSUMAG00000010869	SNRPC	100	88.202	ENSFALG00000003756	SNRPC	100	88.202	Ficedula_albicollis
ENSUMAG00000010869	SNRPC	100	89.326	ENSFDAG00000018111	SNRPC	100	89.326	Fukomys_damarensis
ENSUMAG00000010869	SNRPC	100	86.592	ENSGALG00000002773	SNRPC	100	86.592	Gallus_gallus
ENSUMAG00000010869	SNRPC	100	87.079	ENSGAGG00000003063	SNRPC	100	87.079	Gopherus_agassizii
ENSUMAG00000010869	SNRPC	100	89.326	ENSGGOG00000012499	SNRPC	100	89.326	Gorilla_gorilla
ENSUMAG00000010869	SNRPC	100	89.326	ENSHGLG00000013981	SNRPC	100	89.326	Heterocephalus_glaber_female
ENSUMAG00000010869	SNRPC	63	81.250	ENSHGLG00000005871	-	54	88.312	Heterocephalus_glaber_female
ENSUMAG00000010869	SNRPC	100	74.157	ENSHGLG00100017764	-	100	75.281	Heterocephalus_glaber_male
ENSUMAG00000010869	SNRPC	100	89.326	ENSHGLG00100009478	SNRPC	100	89.326	Heterocephalus_glaber_male
ENSUMAG00000010869	SNRPC	53	86.170	ENSIPUG00000024851	snrpc	100	62.921	Ictalurus_punctatus
ENSUMAG00000010869	SNRPC	100	89.326	ENSSTOG00000013786	SNRPC	100	89.326	Ictidomys_tridecemlineatus
ENSUMAG00000010869	SNRPC	100	88.764	ENSJJAG00000021741	Snrpc	100	88.764	Jaculus_jaculus
ENSUMAG00000010869	SNRPC	100	89.326	ENSLAFG00000013534	SNRPC	100	89.326	Loxodonta_africana
ENSUMAG00000010869	SNRPC	100	88.764	ENSMFAG00000030525	-	100	88.764	Macaca_fascicularis
ENSUMAG00000010869	SNRPC	100	89.326	ENSMFAG00000031764	-	100	89.326	Macaca_fascicularis
ENSUMAG00000010869	SNRPC	100	88.202	ENSMMUG00000039415	-	100	88.202	Macaca_mulatta
ENSUMAG00000010869	SNRPC	100	76.966	ENSMMUG00000045425	-	100	70.787	Macaca_mulatta
ENSUMAG00000010869	SNRPC	100	88.202	ENSMMUG00000000869	-	97	88.202	Macaca_mulatta
ENSUMAG00000010869	SNRPC	100	89.326	ENSMNEG00000032731	SNRPC	100	89.326	Macaca_nemestrina
ENSUMAG00000010869	SNRPC	100	89.326	ENSMLEG00000033916	-	100	89.326	Mandrillus_leucophaeus
ENSUMAG00000010869	SNRPC	98	81.034	ENSMLEG00000040224	-	89	71.839	Mandrillus_leucophaeus
ENSUMAG00000010869	SNRPC	100	86.517	ENSMGAG00000006054	SNRPC	100	86.517	Meleagris_gallopavo
ENSUMAG00000010869	SNRPC	100	88.764	ENSMICG00000032183	-	100	88.764	Microcebus_murinus
ENSUMAG00000010869	SNRPC	100	88.764	ENSMICG00000007339	-	100	88.764	Microcebus_murinus
ENSUMAG00000010869	SNRPC	100	88.764	ENSMOCG00000017609	Snrpc	100	88.764	Microtus_ochrogaster
ENSUMAG00000010869	SNRPC	100	88.202	ENSMODG00000013904	-	100	88.202	Monodelphis_domestica
ENSUMAG00000010869	SNRPC	100	88.764	MGP_CAROLIEiJ_G0021308	Snrpc	100	88.764	Mus_caroli
ENSUMAG00000010869	SNRPC	100	88.764	ENSMUSG00000024217	Snrpc	100	88.764	Mus_musculus
ENSUMAG00000010869	SNRPC	66	99.153	MGP_SPRETEiJ_G0022221	-	98	99.153	Mus_spretus
ENSUMAG00000010869	SNRPC	99	88.636	ENSMPUG00000003210	SNRPC	99	88.636	Mustela_putorius_furo
ENSUMAG00000010869	SNRPC	99	88.636	ENSMLUG00000002488	SNRPC	99	88.636	Myotis_lucifugus
ENSUMAG00000010869	SNRPC	100	88.764	ENSNGAG00000019686	Snrpc	100	88.764	Nannospalax_galili
ENSUMAG00000010869	SNRPC	100	89.326	ENSNLEG00000034810	SNRPC	100	89.326	Nomascus_leucogenys
ENSUMAG00000010869	SNRPC	90	87.578	ENSMEUG00000009300	SNRPC	100	87.578	Notamacropus_eugenii
ENSUMAG00000010869	SNRPC	100	88.764	ENSODEG00000020201	-	100	88.764	Octodon_degus
ENSUMAG00000010869	SNRPC	100	89.326	ENSODEG00000020370	-	100	89.326	Octodon_degus
ENSUMAG00000010869	SNRPC	54	93.814	ENSODEG00000006008	-	69	94.792	Octodon_degus
ENSUMAG00000010869	SNRPC	100	88.202	ENSODEG00000019633	-	100	88.202	Octodon_degus
ENSUMAG00000010869	SNRPC	100	89.326	ENSODEG00000018985	-	100	89.326	Octodon_degus
ENSUMAG00000010869	SNRPC	100	89.326	ENSODEG00000017080	-	100	89.326	Octodon_degus
ENSUMAG00000010869	SNRPC	90	81.212	ENSOANG00000003405	SNRPC	99	71.345	Ornithorhynchus_anatinus
ENSUMAG00000010869	SNRPC	100	87.079	ENSOCUG00000023292	-	100	87.079	Oryctolagus_cuniculus
ENSUMAG00000010869	SNRPC	100	88.202	ENSOCUG00000026430	-	99	88.202	Oryctolagus_cuniculus
ENSUMAG00000010869	SNRPC	100	89.326	ENSOCUG00000026668	-	100	89.326	Oryctolagus_cuniculus
ENSUMAG00000010869	SNRPC	99	88.636	ENSOGAG00000008755	-	88	88.636	Otolemur_garnettii
ENSUMAG00000010869	SNRPC	97	75.145	ENSOGAG00000028405	-	99	72.254	Otolemur_garnettii
ENSUMAG00000010869	SNRPC	100	87.640	ENSOGAG00000026269	-	100	87.640	Otolemur_garnettii
ENSUMAG00000010869	SNRPC	100	89.326	ENSOARG00000010823	SNRPC	100	89.326	Ovis_aries
ENSUMAG00000010869	SNRPC	100	89.326	ENSPPAG00000043871	SNRPC	100	89.326	Pan_paniscus
ENSUMAG00000010869	SNRPC	100	89.326	ENSPPRG00000008647	-	100	89.326	Panthera_pardus
ENSUMAG00000010869	SNRPC	100	89.326	ENSPTIG00000021867	-	100	89.326	Panthera_tigris_altaica
ENSUMAG00000010869	SNRPC	90	68.293	ENSPTIG00000011880	-	81	49.091	Panthera_tigris_altaica
ENSUMAG00000010869	SNRPC	100	89.326	ENSPTRG00000018070	SNRPC	100	89.326	Pan_troglodytes
ENSUMAG00000010869	SNRPC	100	67.416	ENSPANG00000018228	-	56	88.542	Papio_anubis
ENSUMAG00000010869	SNRPC	100	89.326	ENSPANG00000022802	-	100	89.326	Papio_anubis
ENSUMAG00000010869	SNRPC	99	81.818	ENSPSIG00000004876	SNRPC	77	81.250	Pelodiscus_sinensis
ENSUMAG00000010869	SNRPC	100	78.090	ENSPEMG00000002763	-	100	73.596	Peromyscus_maniculatus_bairdii
ENSUMAG00000010869	SNRPC	100	88.764	ENSPEMG00000010773	Snrpc	100	88.764	Peromyscus_maniculatus_bairdii
ENSUMAG00000010869	SNRPC	99	88.636	ENSPCAG00000016885	SNRPC	90	88.636	Procavia_capensis
ENSUMAG00000010869	SNRPC	100	89.326	ENSPCOG00000004904	SNRPC	100	89.326	Propithecus_coquereli
ENSUMAG00000010869	SNRPC	99	88.068	ENSPVAG00000015597	SNRPC	87	88.068	Pteropus_vampyrus
ENSUMAG00000010869	SNRPC	100	88.764	ENSRNOG00000000493	Snrpc	100	88.764	Rattus_norvegicus
ENSUMAG00000010869	SNRPC	100	88.764	ENSRBIG00000022998	-	100	88.764	Rhinopithecus_bieti
ENSUMAG00000010869	SNRPC	100	88.764	ENSRBIG00000014819	-	100	88.764	Rhinopithecus_bieti
ENSUMAG00000010869	SNRPC	100	89.326	ENSRBIG00000037567	-	100	89.326	Rhinopithecus_bieti
ENSUMAG00000010869	SNRPC	100	89.326	ENSRROG00000041300	SNRPC	100	89.326	Rhinopithecus_roxellana
ENSUMAG00000010869	SNRPC	96	73.529	ENSSBOG00000032361	-	66	81.250	Saimiri_boliviensis_boliviensis
ENSUMAG00000010869	SNRPC	100	89.326	ENSSBOG00000031528	-	100	89.326	Saimiri_boliviensis_boliviensis
ENSUMAG00000010869	SNRPC	98	73.714	ENSSBOG00000023189	-	58	86.458	Saimiri_boliviensis_boliviensis
ENSUMAG00000010869	SNRPC	99	88.068	ENSSHAG00000000945	-	87	88.068	Sarcophilus_harrisii
ENSUMAG00000010869	SNRPC	100	87.640	ENSSPUG00000002502	SNRPC	100	87.640	Sphenodon_punctatus
ENSUMAG00000010869	SNRPC	100	98.876	ENSSSCG00000001531	SNRPC	100	98.876	Sus_scrofa
ENSUMAG00000010869	SNRPC	100	87.079	ENSTGUG00000001773	SNRPC	100	87.079	Taeniopygia_guttata
ENSUMAG00000010869	SNRPC	98	78.286	ENSTBEG00000013022	-	62	92.708	Tupaia_belangeri
ENSUMAG00000010869	SNRPC	54	91.667	ENSTBEG00000015356	-	68	91.667	Tupaia_belangeri
ENSUMAG00000010869	SNRPC	99	88.636	ENSTTRG00000007827	SNRPC	86	88.636	Tursiops_truncatus
ENSUMAG00000010869	SNRPC	78	99.275	ENSUAMG00000014125	SNRPC	93	99.275	Ursus_americanus
ENSUMAG00000010869	SNRPC	97	84.393	ENSVVUG00000010467	-	87	79.429	Vulpes_vulpes
ENSUMAG00000010869	SNRPC	100	88.202	ENSVVUG00000021947	-	100	88.202	Vulpes_vulpes