EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000011068 (Gene tree)
Gene ID: 103666485
Gene Symbol: TRNAU1AP
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 19592 bases
Position: chrKK498615.1:8824508-8844099
Accession: 103666485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000015026	RRM_1	PF00076.22	1.4e-27	1	2
ENSUMAP00000015026	RRM_1	PF00076.22	1.4e-27	2	2
ENSUMAP00000015034	RRM_1	PF00076.22	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000017810	TRNAU1AP-202	787	-	ENSUMAP00000015034	177 (aa)	-	-
ENSUMAT00000017802	TRNAU1AP-201	1489	-	ENSUMAP00000015026	287 (aa)	XP_008692735	UPI0004DFE285

Gene Model

Click here to download ENSUMAG00000011068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000011068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000011068	TRNAU1AP	60	30.061	ENSUMAG00000023934	PABPC5	63	30.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSG00000180098	TRNAU1AP	100	99.303	Homo_sapiens
ENSUMAG00000011068	TRNAU1AP	98	58.746	ENSAPOG00000007148	TRNAU1AP	98	58.416	Acanthochromis_polyacanthus
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSAMEG00000011367	TRNAU1AP	100	98.955	Ailuropoda_melanoleuca
ENSUMAG00000011068	TRNAU1AP	91	70.115	ENSACIG00000004161	trnau1apa	93	70.115	Amphilophus_citrinellus
ENSUMAG00000011068	TRNAU1AP	98	58.086	ENSAOCG00000008056	trnau1apa	98	58.416	Amphiprion_ocellaris
ENSUMAG00000011068	TRNAU1AP	98	58.086	ENSAPEG00000008868	trnau1apa	98	58.586	Amphiprion_percula
ENSUMAG00000011068	TRNAU1AP	98	58.199	ENSATEG00000012140	trnau1apa	98	56.270	Anabas_testudineus
ENSUMAG00000011068	TRNAU1AP	94	93.333	ENSAPLG00000002606	TRNAU1AP	99	93.333	Anas_platyrhynchos
ENSUMAG00000011068	TRNAU1AP	99	75.874	ENSACAG00000003995	-	99	75.874	Anolis_carolinensis
ENSUMAG00000011068	TRNAU1AP	99	50.286	ENSACAG00000004205	-	73	52.083	Anolis_carolinensis
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSANAG00000018976	TRNAU1AP	100	99.303	Aotus_nancymaae
ENSUMAG00000011068	TRNAU1AP	98	61.074	ENSACLG00000018515	trnau1apa	98	60.403	Astatotilapia_calliptera
ENSUMAG00000011068	TRNAU1AP	95	65.556	ENSAMXG00000029240	-	98	65.556	Astyanax_mexicanus
ENSUMAG00000011068	TRNAU1AP	95	57.762	ENSAMXG00000013750	trnau1apa	90	57.762	Astyanax_mexicanus
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSBTAG00000010393	TRNAU1AP	100	98.955	Bos_taurus
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSCJAG00000009717	TRNAU1AP	100	99.303	Callithrix_jacchus
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSCAFG00000011735	TRNAU1AP	100	98.955	Canis_familiaris
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSCAFG00020023584	TRNAU1AP	100	98.955	Canis_lupus_dingo
ENSUMAG00000011068	TRNAU1AP	100	98.606	ENSCHIG00000023215	TRNAU1AP	100	98.606	Capra_hircus
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSTSYG00000003506	TRNAU1AP	100	98.955	Carlito_syrichta
ENSUMAG00000011068	TRNAU1AP	100	98.606	ENSCPOG00000001925	TRNAU1AP	100	98.606	Cavia_porcellus
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSCCAG00000037506	TRNAU1AP	100	99.303	Cebus_capucinus
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSCATG00000044617	TRNAU1AP	100	98.955	Cercocebus_atys
ENSUMAG00000011068	TRNAU1AP	100	97.909	ENSCLAG00000008223	TRNAU1AP	100	97.909	Chinchilla_lanigera
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSCSAG00000001014	TRNAU1AP	100	98.955	Chlorocebus_sabaeus
ENSUMAG00000011068	TRNAU1AP	100	93.785	ENSCPBG00000000121	TRNAU1AP	100	94.526	Chrysemys_picta_bellii
ENSUMAG00000011068	TRNAU1AP	99	34.615	ENSCSAVG00000011781	-	90	51.462	Ciona_savignyi
ENSUMAG00000011068	TRNAU1AP	100	98.870	ENSCANG00000041949	TRNAU1AP	100	98.870	Colobus_angolensis_palliatus
ENSUMAG00000011068	TRNAU1AP	100	98.606	ENSCGRG00001004713	Trnau1ap	100	98.606	Cricetulus_griseus_chok1gshd
ENSUMAG00000011068	TRNAU1AP	100	98.606	ENSCGRG00000014532	Trnau1ap	100	98.606	Cricetulus_griseus_crigri
ENSUMAG00000011068	TRNAU1AP	98	58.333	ENSCSEG00000006663	trnau1apa	95	56.954	Cynoglossus_semilaevis
ENSUMAG00000011068	TRNAU1AP	97	57.823	ENSCVAG00000018069	trnau1apa	94	59.341	Cyprinodon_variegatus
ENSUMAG00000011068	TRNAU1AP	95	53.571	ENSDARG00000101323	trnau1apa	88	51.957	Danio_rerio
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSDNOG00000033009	TRNAU1AP	100	98.955	Dasypus_novemcinctus
ENSUMAG00000011068	TRNAU1AP	67	77.083	ENSDNOG00000047959	-	97	77.540	Dasypus_novemcinctus
ENSUMAG00000011068	TRNAU1AP	99	90.909	ENSDORG00000006349	Trnau1ap	100	99.134	Dipodomys_ordii
ENSUMAG00000011068	TRNAU1AP	96	38.037	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSUMAG00000011068	TRNAU1AP	100	91.525	ENSETEG00000012594	TRNAU1AP	100	93.878	Echinops_telfairi
ENSUMAG00000011068	TRNAU1AP	55	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSEASG00005010062	TRNAU1AP	100	99.303	Equus_asinus_asinus
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSECAG00000012980	TRNAU1AP	100	99.303	Equus_caballus
ENSUMAG00000011068	TRNAU1AP	96	63.542	ENSELUG00000017686	trnau1apa	94	62.718	Esox_lucius
ENSUMAG00000011068	TRNAU1AP	96	70.526	ENSELUG00000022790	-	96	64.773	Esox_lucius
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSFCAG00000013401	TRNAU1AP	100	99.303	Felis_catus
ENSUMAG00000011068	TRNAU1AP	100	91.525	ENSFALG00000001371	TRNAU1AP	100	93.431	Ficedula_albicollis
ENSUMAG00000011068	TRNAU1AP	100	97.909	ENSFDAG00000018599	TRNAU1AP	100	97.909	Fukomys_damarensis
ENSUMAG00000011068	TRNAU1AP	79	60.408	ENSFHEG00000018232	trnau1apa	86	57.937	Fundulus_heteroclitus
ENSUMAG00000011068	TRNAU1AP	95	53.497	ENSGMOG00000016508	trnau1apa	93	54.577	Gadus_morhua
ENSUMAG00000011068	TRNAU1AP	99	47.692	ENSGALG00000012721	C2H6orf52	95	44.788	Gallus_gallus
ENSUMAG00000011068	TRNAU1AP	100	93.031	ENSGALG00000001310	-	100	93.031	Gallus_gallus
ENSUMAG00000011068	TRNAU1AP	78	58.403	ENSGAFG00000004928	trnau1apa	90	59.244	Gambusia_affinis
ENSUMAG00000011068	TRNAU1AP	98	60.274	ENSGACG00000001443	trnau1apa	95	59.932	Gasterosteus_aculeatus
ENSUMAG00000011068	TRNAU1AP	100	94.350	ENSGAGG00000004940	TRNAU1AP	100	94.891	Gopherus_agassizii
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSGGOG00000003511	TRNAU1AP	100	99.303	Gorilla_gorilla
ENSUMAG00000011068	TRNAU1AP	98	60.066	ENSHBUG00000002510	trnau1apa	98	59.406	Haplochromis_burtoni
ENSUMAG00000011068	TRNAU1AP	100	97.909	ENSHGLG00000010380	TRNAU1AP	100	97.909	Heterocephalus_glaber_female
ENSUMAG00000011068	TRNAU1AP	100	97.175	ENSHGLG00100012699	TRNAU1AP	100	95.470	Heterocephalus_glaber_male
ENSUMAG00000011068	TRNAU1AP	99	57.426	ENSHCOG00000014770	trnau1apa	97	56.623	Hippocampus_comes
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSSTOG00000000079	TRNAU1AP	100	99.303	Ictidomys_tridecemlineatus
ENSUMAG00000011068	TRNAU1AP	100	98.258	ENSJJAG00000010128	Trnau1ap	100	98.258	Jaculus_jaculus
ENSUMAG00000011068	TRNAU1AP	95	60.208	ENSKMAG00000001230	trnau1apa	93	58.478	Kryptolebias_marmoratus
ENSUMAG00000011068	TRNAU1AP	95	60.751	ENSLBEG00000011683	trnau1apa	93	59.864	Labrus_bergylta
ENSUMAG00000011068	TRNAU1AP	100	77.401	ENSLACG00000005541	TRNAU1AP	99	72.281	Latimeria_chalumnae
ENSUMAG00000011068	TRNAU1AP	99	72.028	ENSLOCG00000004041	trnau1apa	99	70.979	Lepisosteus_oculatus
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSLAFG00000007628	TRNAU1AP	100	98.955	Loxodonta_africana
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSMFAG00000043751	TRNAU1AP	100	98.955	Macaca_fascicularis
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSMMUG00000006561	TRNAU1AP	100	98.955	Macaca_mulatta
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSMNEG00000044201	TRNAU1AP	100	98.955	Macaca_nemestrina
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSMLEG00000015649	TRNAU1AP	100	98.955	Mandrillus_leucophaeus
ENSUMAG00000011068	TRNAU1AP	98	58.958	ENSMAMG00000001247	trnau1apa	98	58.824	Mastacembelus_armatus
ENSUMAG00000011068	TRNAU1AP	98	61.074	ENSMZEG00005017722	trnau1apa	98	60.403	Maylandia_zebra
ENSUMAG00000011068	TRNAU1AP	100	90.395	ENSMGAG00000002105	TRNAU1AP	100	92.446	Meleagris_gallopavo
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSMICG00000008386	TRNAU1AP	100	98.955	Microcebus_murinus
ENSUMAG00000011068	TRNAU1AP	100	98.258	ENSMOCG00000011189	Trnau1ap	100	98.258	Microtus_ochrogaster
ENSUMAG00000011068	TRNAU1AP	95	58.456	ENSMMOG00000012107	trnau1apa	95	56.786	Mola_mola
ENSUMAG00000011068	TRNAU1AP	100	94.774	ENSMODG00000010927	TRNAU1AP	100	94.774	Monodelphis_domestica
ENSUMAG00000011068	TRNAU1AP	96	60.751	ENSMALG00000016778	trnau1apa	94	58.362	Monopterus_albus
ENSUMAG00000011068	TRNAU1AP	100	98.258	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSUMAG00000011068	TRNAU1AP	100	98.258	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSUMAG00000011068	TRNAU1AP	100	98.606	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSUMAG00000011068	TRNAU1AP	100	97.909	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSUMAG00000011068	TRNAU1AP	100	98.606	ENSMPUG00000015511	TRNAU1AP	100	98.606	Mustela_putorius_furo
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSMLUG00000012586	TRNAU1AP	100	98.955	Myotis_lucifugus
ENSUMAG00000011068	TRNAU1AP	100	96.864	ENSNGAG00000015881	Trnau1ap	100	96.864	Nannospalax_galili
ENSUMAG00000011068	TRNAU1AP	99	56.997	ENSNBRG00000001758	trnau1apa	98	56.997	Neolamprologus_brichardi
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSNLEG00000009822	TRNAU1AP	100	99.303	Nomascus_leucogenys
ENSUMAG00000011068	TRNAU1AP	100	91.525	ENSMEUG00000006117	TRNAU1AP	100	93.525	Notamacropus_eugenii
ENSUMAG00000011068	TRNAU1AP	70	97.273	ENSOPRG00000007084	-	69	97.273	Ochotona_princeps
ENSUMAG00000011068	TRNAU1AP	100	98.258	ENSODEG00000002970	TRNAU1AP	100	98.258	Octodon_degus
ENSUMAG00000011068	TRNAU1AP	80	59.036	ENSONIG00000004715	trnau1apa	95	59.917	Oreochromis_niloticus
ENSUMAG00000011068	TRNAU1AP	98	77.143	ENSOANG00000005325	-	99	73.776	Ornithorhynchus_anatinus
ENSUMAG00000011068	TRNAU1AP	89	76.562	ENSOCUG00000006834	-	100	74.609	Oryctolagus_cuniculus
ENSUMAG00000011068	TRNAU1AP	100	77.431	ENSOCUG00000002353	-	100	77.431	Oryctolagus_cuniculus
ENSUMAG00000011068	TRNAU1AP	100	97.740	ENSOCUG00000011704	-	100	97.213	Oryctolagus_cuniculus
ENSUMAG00000011068	TRNAU1AP	98	58.020	ENSORLG00000010428	trnau1apa	95	57.042	Oryzias_latipes
ENSUMAG00000011068	TRNAU1AP	98	58.020	ENSORLG00020000926	trnau1ap	95	56.849	Oryzias_latipes_hni
ENSUMAG00000011068	TRNAU1AP	98	58.020	ENSORLG00015009858	trnau1ap	95	56.849	Oryzias_latipes_hsok
ENSUMAG00000011068	TRNAU1AP	98	59.044	ENSOMEG00000007873	trnau1apa	95	56.164	Oryzias_melastigma
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSOGAG00000002274	TRNAU1AP	100	98.955	Otolemur_garnettii
ENSUMAG00000011068	TRNAU1AP	100	98.606	ENSOARG00000002843	TRNAU1AP	100	98.606	Ovis_aries
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSPPAG00000033927	TRNAU1AP	100	99.303	Pan_paniscus
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSPPRG00000004416	TRNAU1AP	100	99.303	Panthera_pardus
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSPTIG00000016677	TRNAU1AP	100	99.303	Panthera_tigris_altaica
ENSUMAG00000011068	TRNAU1AP	100	73.889	ENSPTRG00000000434	-	97	79.336	Pan_troglodytes
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSPANG00000016019	TRNAU1AP	100	98.955	Papio_anubis
ENSUMAG00000011068	TRNAU1AP	95	59.717	ENSPKIG00000015511	trnau1apa	92	58.304	Paramormyrops_kingsleyae
ENSUMAG00000011068	TRNAU1AP	94	74.468	ENSPKIG00000022205	-	93	77.528	Paramormyrops_kingsleyae
ENSUMAG00000011068	TRNAU1AP	100	93.785	ENSPSIG00000006864	TRNAU1AP	100	94.891	Pelodiscus_sinensis
ENSUMAG00000011068	TRNAU1AP	94	60.145	ENSPMGG00000023893	trnau1apa	91	60.148	Periophthalmus_magnuspinnatus
ENSUMAG00000011068	TRNAU1AP	100	98.258	ENSPEMG00000007877	Trnau1ap	100	98.258	Peromyscus_maniculatus_bairdii
ENSUMAG00000011068	TRNAU1AP	78	60.987	ENSPMAG00000005934	trnau1apa	96	60.185	Petromyzon_marinus
ENSUMAG00000011068	TRNAU1AP	60	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSUMAG00000011068	TRNAU1AP	95	56.944	ENSPFOG00000008100	trnau1apa	93	57.639	Poecilia_formosa
ENSUMAG00000011068	TRNAU1AP	91	56.679	ENSPLAG00000010236	trnau1apa	93	57.401	Poecilia_latipinna
ENSUMAG00000011068	TRNAU1AP	96	55.862	ENSPMEG00000016387	trnau1apa	92	56.552	Poecilia_mexicana
ENSUMAG00000011068	TRNAU1AP	93	53.903	ENSPREG00000019821	trnau1apa	86	64.286	Poecilia_reticulata
ENSUMAG00000011068	TRNAU1AP	100	79.888	ENSPPYG00000001639	-	100	86.047	Pongo_abelii
ENSUMAG00000011068	TRNAU1AP	98	82.206	ENSPCOG00000023470	-	100	82.206	Propithecus_coquereli
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSPCOG00000027712	-	100	98.955	Propithecus_coquereli
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSPVAG00000017214	TRNAU1AP	100	99.303	Pteropus_vampyrus
ENSUMAG00000011068	TRNAU1AP	98	60.066	ENSPNYG00000010130	trnau1apa	97	65.185	Pundamilia_nyererei
ENSUMAG00000011068	TRNAU1AP	95	56.184	ENSPNAG00000024905	trnau1apa	91	55.036	Pygocentrus_nattereri
ENSUMAG00000011068	TRNAU1AP	94	90.037	ENSRNOG00000055344	Trnau1ap	92	90.037	Rattus_norvegicus
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSRBIG00000029083	TRNAU1AP	100	99.303	Rhinopithecus_bieti
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSRROG00000029128	TRNAU1AP	100	99.303	Rhinopithecus_roxellana
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSSBOG00000021299	TRNAU1AP	100	99.303	Saimiri_boliviensis_boliviensis
ENSUMAG00000011068	TRNAU1AP	100	94.077	ENSSHAG00000008108	TRNAU1AP	100	94.077	Sarcophilus_harrisii
ENSUMAG00000011068	TRNAU1AP	98	53.722	ENSSMAG00000020851	trnau1apa	98	57.049	Scophthalmus_maximus
ENSUMAG00000011068	TRNAU1AP	96	58.844	ENSSDUG00000011734	trnau1apa	94	57.483	Seriola_dumerili
ENSUMAG00000011068	TRNAU1AP	96	46.545	ENSSLDG00000012101	trnau1apa	92	50.538	Seriola_lalandi_dorsalis
ENSUMAG00000011068	TRNAU1AP	100	97.740	ENSSARG00000007536	TRNAU1AP	100	97.842	Sorex_araneus
ENSUMAG00000011068	TRNAU1AP	99	86.364	ENSSPUG00000010400	-	100	86.364	Sphenodon_punctatus
ENSUMAG00000011068	TRNAU1AP	99	82.386	ENSSPUG00000010415	-	100	82.386	Sphenodon_punctatus
ENSUMAG00000011068	TRNAU1AP	98	58.689	ENSSPAG00000005029	trnau1apa	98	57.980	Stegastes_partitus
ENSUMAG00000011068	TRNAU1AP	100	99.303	ENSSSCG00000030284	TRNAU1AP	100	99.303	Sus_scrofa
ENSUMAG00000011068	TRNAU1AP	99	51.685	ENSTGUG00000005908	-	100	53.061	Taeniopygia_guttata
ENSUMAG00000011068	TRNAU1AP	100	91.525	ENSTGUG00000000735	-	100	93.525	Taeniopygia_guttata
ENSUMAG00000011068	TRNAU1AP	98	58.804	ENSTRUG00000003352	trnau1apa	98	58.140	Takifugu_rubripes
ENSUMAG00000011068	TRNAU1AP	98	56.766	ENSTNIG00000006129	trnau1apa	98	56.766	Tetraodon_nigroviridis
ENSUMAG00000011068	TRNAU1AP	100	92.655	ENSTBEG00000008049	-	100	87.347	Tupaia_belangeri
ENSUMAG00000011068	TRNAU1AP	100	98.955	ENSTTRG00000001854	TRNAU1AP	100	98.955	Tursiops_truncatus
ENSUMAG00000011068	TRNAU1AP	100	99.435	ENSUAMG00000008789	TRNAU1AP	100	99.635	Ursus_americanus
ENSUMAG00000011068	TRNAU1AP	100	98.870	ENSVPAG00000006778	TRNAU1AP	100	88.356	Vicugna_pacos
ENSUMAG00000011068	TRNAU1AP	100	98.305	ENSVVUG00000012518	TRNAU1AP	93	97.183	Vulpes_vulpes
ENSUMAG00000011068	TRNAU1AP	95	55.903	ENSXMAG00000017361	trnau1apa	93	57.639	Xiphophorus_maculatus