EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000011141 (Gene tree)
Gene ID: 103661911
Gene Symbol: CSTF2T
Alias: -
Full Name: cleavage stimulation factor subunit 2 tau variant
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 1917 bases
Position: chrKK498582.1:11636895-11638811
Accession: 103661911
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000015132	RRM_1	PF00076.22	5.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000017925	CSTF2T-201	1917	-	ENSUMAP00000015132	638 (aa)	XP_008687802	UPI0004DFD82B

Gene Model

Click here to download ENSUMAG00000011141's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000011141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000011141	CSTF2T	96	74.747	ENSUMAG00000012417	CSTF2	99	77.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000011141	CSTF2T	100	90.016	ENSG00000177613	CSTF2T	100	88.612	Homo_sapiens
ENSUMAG00000011141	CSTF2T	100	95.298	ENSAMEG00000015766	CSTF2T	100	95.298	Ailuropoda_melanoleuca
ENSUMAG00000011141	CSTF2T	51	83.988	ENSANAG00000027508	-	89	83.735	Aotus_nancymaae
ENSUMAG00000011141	CSTF2T	83	87.302	ENSBTAG00000018406	CSTF2T	100	92.163	Bos_taurus
ENSUMAG00000011141	CSTF2T	51	78.593	ENSCJAG00000039083	-	93	78.593	Callithrix_jacchus
ENSUMAG00000011141	CSTF2T	51	84.290	ENSCJAG00000011554	-	97	83.384	Callithrix_jacchus
ENSUMAG00000011141	CSTF2T	89	98.438	ENSCAFG00000015567	CSTF2T	99	100.000	Canis_familiaris
ENSUMAG00000011141	CSTF2T	79	82.101	ENSCAFG00020026426	CSTF2T	100	81.997	Canis_lupus_dingo
ENSUMAG00000011141	CSTF2T	100	90.439	ENSCHIG00000016590	CSTF2T	100	90.596	Capra_hircus
ENSUMAG00000011141	CSTF2T	100	88.820	ENSTSYG00000007750	CSTF2T	100	88.665	Carlito_syrichta
ENSUMAG00000011141	CSTF2T	100	84.012	ENSCPOG00000004195	CSTF2T	100	83.560	Cavia_porcellus
ENSUMAG00000011141	CSTF2T	51	82.883	ENSCCAG00000020816	-	88	82.635	Cebus_capucinus
ENSUMAG00000011141	CSTF2T	51	83.784	ENSCATG00000041868	-	95	83.183	Cercocebus_atys
ENSUMAG00000011141	CSTF2T	100	85.542	ENSCLAG00000017916	CSTF2T	100	84.940	Chinchilla_lanigera
ENSUMAG00000011141	CSTF2T	100	90.388	ENSCSAG00000018437	CSTF2T	100	89.767	Chlorocebus_sabaeus
ENSUMAG00000011141	CSTF2T	61	98.438	ENSCHOG00000011888	-	68	95.802	Choloepus_hoffmanni
ENSUMAG00000011141	CSTF2T	50	82.121	ENSCANG00000005843	-	92	82.121	Colobus_angolensis_palliatus
ENSUMAG00000011141	CSTF2T	100	86.656	ENSCGRG00001003222	Cstf2t	100	85.366	Cricetulus_griseus_chok1gshd
ENSUMAG00000011141	CSTF2T	100	86.810	ENSCGRG00000008682	Cstf2t	100	86.810	Cricetulus_griseus_crigri
ENSUMAG00000011141	CSTF2T	100	88.889	ENSDNOG00000003283	CSTF2T	100	87.793	Dasypus_novemcinctus
ENSUMAG00000011141	CSTF2T	79	90.693	ENSDORG00000011245	Cstf2t	100	87.442	Dipodomys_ordii
ENSUMAG00000011141	CSTF2T	57	81.132	ENSEBUG00000014295	CSTF2T	93	81.132	Eptatretus_burgeri
ENSUMAG00000011141	CSTF2T	100	92.633	ENSEASG00005012929	CSTF2T	100	91.693	Equus_asinus_asinus
ENSUMAG00000011141	CSTF2T	100	93.103	ENSECAG00000004701	CSTF2T	100	92.476	Equus_caballus
ENSUMAG00000011141	CSTF2T	100	93.730	ENSFCAG00000046300	CSTF2T	100	93.887	Felis_catus
ENSUMAG00000011141	CSTF2T	100	82.424	ENSFDAG00000021170	CSTF2T	100	87.652	Fukomys_damarensis
ENSUMAG00000011141	CSTF2T	100	88.768	ENSGGOG00000036416	-	100	88.144	Gorilla_gorilla
ENSUMAG00000011141	CSTF2T	100	88.768	ENSGGOG00000042388	-	100	88.144	Gorilla_gorilla
ENSUMAG00000011141	CSTF2T	79	87.908	ENSHGLG00000015478	CSTF2T	100	87.234	Heterocephalus_glaber_female
ENSUMAG00000011141	CSTF2T	79	87.908	ENSHGLG00100000336	CSTF2T	100	87.386	Heterocephalus_glaber_male
ENSUMAG00000011141	CSTF2T	100	86.196	ENSSTOG00000026303	CSTF2T	100	85.890	Ictidomys_tridecemlineatus
ENSUMAG00000011141	CSTF2T	100	76.176	ENSLAFG00000002058	CSTF2T	100	82.445	Loxodonta_africana
ENSUMAG00000011141	CSTF2T	50	83.436	ENSMFAG00000042009	-	97	82.822	Macaca_fascicularis
ENSUMAG00000011141	CSTF2T	51	83.234	ENSMMUG00000042906	-	99	82.635	Macaca_mulatta
ENSUMAG00000011141	CSTF2T	50	83.436	ENSMNEG00000031410	-	97	82.822	Macaca_nemestrina
ENSUMAG00000011141	CSTF2T	80	89.753	ENSMAUG00000006359	Cstf2t	100	85.583	Mesocricetus_auratus
ENSUMAG00000011141	CSTF2T	100	88.889	ENSMICG00000000867	-	100	89.506	Microcebus_murinus
ENSUMAG00000011141	CSTF2T	100	81.944	ENSMICG00000030551	-	100	89.398	Microcebus_murinus
ENSUMAG00000011141	CSTF2T	100	84.862	ENSMOCG00000020428	Cstf2t	100	84.709	Microtus_ochrogaster
ENSUMAG00000011141	CSTF2T	79	88.953	MGP_CAROLIEiJ_G0022872	Cstf2t	100	85.890	Mus_caroli
ENSUMAG00000011141	CSTF2T	79	88.760	ENSMUSG00000053536	Cstf2t	100	86.503	Mus_musculus
ENSUMAG00000011141	CSTF2T	79	88.145	MGP_PahariEiJ_G0014365	Cstf2t	100	86.039	Mus_pahari
ENSUMAG00000011141	CSTF2T	100	81.748	MGP_SPRETEiJ_G0023790	Cstf2t	100	86.963	Mus_spretus
ENSUMAG00000011141	CSTF2T	100	91.149	ENSMPUG00000020141	CSTF2T	100	91.615	Mustela_putorius_furo
ENSUMAG00000011141	CSTF2T	100	90.781	ENSMLUG00000011187	-	100	90.625	Myotis_lucifugus
ENSUMAG00000011141	CSTF2T	100	81.056	ENSMLUG00000027140	-	100	80.745	Myotis_lucifugus
ENSUMAG00000011141	CSTF2T	100	84.049	ENSNGAG00000003304	Cstf2t	100	85.123	Nannospalax_galili
ENSUMAG00000011141	CSTF2T	100	85.913	ENSNLEG00000012025	CSTF2T	100	85.294	Nomascus_leucogenys
ENSUMAG00000011141	CSTF2T	100	79.819	ENSODEG00000012386	CSTF2T	100	78.614	Octodon_degus
ENSUMAG00000011141	CSTF2T	79	89.662	ENSOCUG00000004647	-	89	89.662	Oryctolagus_cuniculus
ENSUMAG00000011141	CSTF2T	100	89.498	ENSOGAG00000014565	CSTF2T	100	90.282	Otolemur_garnettii
ENSUMAG00000011141	CSTF2T	100	89.815	ENSOARG00000013688	-	100	92.163	Ovis_aries
ENSUMAG00000011141	CSTF2T	100	88.117	ENSOARG00000019124	-	100	90.141	Ovis_aries
ENSUMAG00000011141	CSTF2T	50	82.622	ENSPPAG00000032242	-	96	82.012	Pan_paniscus
ENSUMAG00000011141	CSTF2T	100	93.260	ENSPPRG00000018659	CSTF2T	100	93.103	Panthera_pardus
ENSUMAG00000011141	CSTF2T	100	91.223	ENSPTIG00000021145	CSTF2T	100	91.223	Panthera_tigris_altaica
ENSUMAG00000011141	CSTF2T	50	82.622	ENSPTRG00000043097	-	96	82.012	Pan_troglodytes
ENSUMAG00000011141	CSTF2T	50	83.436	ENSPANG00000029734	-	97	82.822	Papio_anubis
ENSUMAG00000011141	CSTF2T	98	52.255	ENSPFOG00000016756	CSTF2T	94	65.722	Poecilia_formosa
ENSUMAG00000011141	CSTF2T	100	90.078	ENSPPYG00000002441	CSTF2T	100	89.922	Pongo_abelii
ENSUMAG00000011141	CSTF2T	80	91.506	ENSPCAG00000000046	CSTF2T	100	88.336	Procavia_capensis
ENSUMAG00000011141	CSTF2T	99	87.284	ENSPCOG00000010982	CSTF2T	99	90.581	Propithecus_coquereli
ENSUMAG00000011141	CSTF2T	100	90.282	ENSPVAG00000006274	CSTF2T	100	89.812	Pteropus_vampyrus
ENSUMAG00000011141	CSTF2T	80	89.714	ENSRNOG00000050289	Cstf2t	100	86.217	Rattus_norvegicus
ENSUMAG00000011141	CSTF2T	100	89.392	ENSRBIG00000029324	CSTF2T	100	88.924	Rhinopithecus_bieti
ENSUMAG00000011141	CSTF2T	100	89.548	ENSRROG00000042507	CSTF2T	100	89.080	Rhinopithecus_roxellana
ENSUMAG00000011141	CSTF2T	100	89.062	ENSSBOG00000022638	CSTF2T	100	88.750	Saimiri_boliviensis_boliviensis
ENSUMAG00000011141	CSTF2T	68	94.882	ENSSARG00000002013	-	87	95.276	Sorex_araneus
ENSUMAG00000011141	CSTF2T	69	90.196	ENSSPAG00000009247	-	87	88.462	Stegastes_partitus
ENSUMAG00000011141	CSTF2T	100	90.469	ENSSSCG00000010430	CSTF2T	100	90.469	Sus_scrofa
ENSUMAG00000011141	CSTF2T	100	79.062	ENSTBEG00000014379	CSTF2T	100	79.375	Tupaia_belangeri
ENSUMAG00000011141	CSTF2T	100	90.596	ENSTTRG00000003341	CSTF2T	100	90.125	Tursiops_truncatus
ENSUMAG00000011141	CSTF2T	66	96.020	ENSVVUG00000002575	CSTF2T	97	95.652	Vulpes_vulpes