EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000011251 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 5450 bases
Position: chrKK498637.1:10646051-10651500
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000015316	zf-C2H2	PF00096.26	6.1e-25	1	4
ENSUMAP00000015316	zf-C2H2	PF00096.26	6.1e-25	2	4
ENSUMAP00000015316	zf-C2H2	PF00096.26	6.1e-25	3	4
ENSUMAP00000015316	zf-C2H2	PF00096.26	6.1e-25	4	4
ENSUMAP00000015316	zf-met	PF12874.7	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000018126	-	1725	-	ENSUMAP00000015316	135 (aa)	-	UPI0000ECFA75

Gene Model

Click here to download ENSUMAG00000011251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000011251's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000011251	-	100	48.031	ENSUMAG00000024767	-	72	48.031
ENSUMAG00000011251	-	100	53.448	ENSUMAG00000023056	-	91	53.448
ENSUMAG00000011251	-	100	48.507	ENSUMAG00000023059	ZNF226	71	48.507
ENSUMAG00000011251	-	100	45.185	ENSUMAG00000004061	-	78	45.185
ENSUMAG00000011251	-	100	44.615	ENSUMAG00000003733	PRDM5	85	44.615
ENSUMAG00000011251	-	100	37.594	ENSUMAG00000006525	SNAI2	53	37.594
ENSUMAG00000011251	-	100	46.729	ENSUMAG00000014322	ZFP1	60	46.729
ENSUMAG00000011251	-	100	43.307	ENSUMAG00000017894	-	79	43.307
ENSUMAG00000011251	-	100	44.860	ENSUMAG00000023930	ZNF454	73	44.860
ENSUMAG00000011251	-	100	43.651	ENSUMAG00000007577	-	97	43.651
ENSUMAG00000011251	-	99	47.009	ENSUMAG00000024602	-	96	47.009
ENSUMAG00000011251	-	100	41.860	ENSUMAG00000007151	-	71	41.860
ENSUMAG00000011251	-	100	45.370	ENSUMAG00000014213	ZNF317	70	45.370
ENSUMAG00000011251	-	100	48.544	ENSUMAG00000017193	ZFP69B	62	48.544
ENSUMAG00000011251	-	100	45.455	ENSUMAG00000004054	-	78	45.455
ENSUMAG00000011251	-	100	47.727	ENSUMAG00000004051	-	83	47.727
ENSUMAG00000011251	-	96	47.368	ENSUMAG00000015722	ZNF770	55	47.368
ENSUMAG00000011251	-	100	38.298	ENSUMAG00000004744	-	57	38.298
ENSUMAG00000011251	-	100	47.368	ENSUMAG00000024271	ZFP64	60	38.542
ENSUMAG00000011251	-	100	44.776	ENSUMAG00000019336	-	99	44.776
ENSUMAG00000011251	-	100	47.244	ENSUMAG00000023068	ZNF235	61	47.244
ENSUMAG00000011251	-	100	45.926	ENSUMAG00000023065	ZNF233	74	45.926
ENSUMAG00000011251	-	100	41.045	ENSUMAG00000019496	-	98	41.045
ENSUMAG00000011251	-	100	42.636	ENSUMAG00000007135	-	78	42.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000011251	-	100	100.000	ENSAMEG00000013858	-	92	100.000	Ailuropoda_melanoleuca
ENSUMAG00000011251	-	99	72.388	ENSACIG00000002180	-	99	72.388	Amphilophus_citrinellus
ENSUMAG00000011251	-	100	100.000	ENSAPLG00000015700	GFI1	50	100.000	Anas_platyrhynchos
ENSUMAG00000011251	-	84	82.143	ENSACLG00000001258	-	91	82.143	Astatotilapia_calliptera
ENSUMAG00000011251	-	99	93.284	ENSAMXG00000006669	GFI1	54	93.284	Astyanax_mexicanus
ENSUMAG00000011251	-	82	82.883	ENSAMXG00000015228	-	51	82.883	Astyanax_mexicanus
ENSUMAG00000011251	-	84	100.000	ENSCAPG00000016268	-	100	100.000	Cavia_aperea
ENSUMAG00000011251	-	100	99.259	ENSCPBG00000015742	-	100	99.259	Chrysemys_picta_bellii
ENSUMAG00000011251	-	99	78.358	ENSCING00000011342	-	71	78.358	Ciona_intestinalis
ENSUMAG00000011251	-	100	79.259	ENSCSAVG00000005904	-	83	79.259	Ciona_savignyi
ENSUMAG00000011251	-	100	100.000	ENSCGRG00000013485	-	100	100.000	Cricetulus_griseus_crigri
ENSUMAG00000011251	-	100	100.000	ENSDORG00000023443	-	100	100.000	Dipodomys_ordii
ENSUMAG00000011251	-	100	100.000	ENSFDAG00000019296	-	100	100.000	Fukomys_damarensis
ENSUMAG00000011251	-	100	99.259	ENSGAGG00000015899	GFI1	100	99.259	Gopherus_agassizii
ENSUMAG00000011251	-	82	81.982	ENSIPUG00000021407	-	52	81.982	Ictalurus_punctatus
ENSUMAG00000011251	-	100	96.296	ENSIPUG00000013414	GFI1	56	96.296	Ictalurus_punctatus
ENSUMAG00000011251	-	84	100.000	ENSJJAG00000022622	-	100	100.000	Jaculus_jaculus
ENSUMAG00000011251	-	100	100.000	ENSMMUG00000005068	GFI1	100	100.000	Macaca_mulatta
ENSUMAG00000011251	-	100	100.000	ENSMAUG00000021273	-	100	100.000	Mesocricetus_auratus
ENSUMAG00000011251	-	100	100.000	ENSMOCG00000004478	-	100	100.000	Microtus_ochrogaster
ENSUMAG00000011251	-	100	95.556	ENSMMOG00000005556	gfi1ab	62	95.556	Mola_mola
ENSUMAG00000011251	-	100	100.000	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSUMAG00000011251	-	100	100.000	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSUMAG00000011251	-	100	100.000	ENSNGAG00000002549	-	100	100.000	Nannospalax_galili
ENSUMAG00000011251	-	84	80.531	ENSNBRG00000010351	-	88	80.531	Neolamprologus_brichardi
ENSUMAG00000011251	-	84	78.761	ENSNBRG00000001834	-	94	78.761	Neolamprologus_brichardi
ENSUMAG00000011251	-	100	100.000	ENSODEG00000006410	-	100	100.000	Octodon_degus
ENSUMAG00000011251	-	100	98.519	ENSOANG00000022289	-	72	98.519	Ornithorhynchus_anatinus
ENSUMAG00000011251	-	99	88.722	ENSPTIG00000002680	-	99	88.722	Panthera_tigris_altaica
ENSUMAG00000011251	-	100	97.778	ENSPMGG00000012546	gfi1ab	73	97.778	Periophthalmus_magnuspinnatus
ENSUMAG00000011251	-	100	97.778	ENSPLAG00000010879	gfi1ab	55	97.778	Poecilia_latipinna
ENSUMAG00000011251	-	83	82.143	ENSPNYG00000001775	-	88	82.143	Pundamilia_nyererei
ENSUMAG00000011251	-	81	82.727	ENSPNAG00000014299	-	54	82.727	Pygocentrus_nattereri
ENSUMAG00000011251	-	96	71.756	ENSSLDG00000017614	-	95	71.756	Seriola_lalandi_dorsalis
ENSUMAG00000011251	-	100	97.778	ENSSPAG00000009140	gfi1ab	58	97.778	Stegastes_partitus
ENSUMAG00000011251	-	100	100.000	ENSTGUG00000006060	GFI1	58	100.000	Taeniopygia_guttata
ENSUMAG00000011251	-	83	92.857	ENSXCOG00000009186	-	90	92.857	Xiphophorus_couchianus
ENSUMAG00000011251	-	96	64.667	ENSXMAG00000006527	-	50	64.667	Xiphophorus_maculatus