EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000011268 (Gene tree)
Gene ID: 103677453
Gene Symbol: GFM1
Alias: EFG1
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 42440 bases
Position: chrKK498530.1:3330676-3373115
Accession: 103677453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000015346	GTP_EFTU	PF00009.27	1.2e-63	1	1
ENSUMAP00000015346	GTP_EFTU_D2	PF03144.25	1e-16	1	1
ENSUMAP00000015346	EFG_IV	PF03764.18	3.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000018159	GFM1-201	3188	XM_008706720	ENSUMAP00000015346	754 (aa)	XP_008704942	UPI0004DFD240

Gene Model

Click here to download ENSUMAG00000011268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000011268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000011268	GFM1	53	33.495	ENSUMAG00000001595	GUF1	62	33.495
ENSUMAG00000011268	GFM1	92	34.973	ENSUMAG00000007328	GFM2	91	35.109
ENSUMAG00000011268	GFM1	73	38.926	ENSUMAG00000007474	EEF2	74	38.926
ENSUMAG00000011268	GFM1	58	30.986	ENSUMAG00000014323	EFTUD2	51	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000011268	GFM1	98	92.527	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSUMAG00000011268	GFM1	90	80.030	ENSAPOG00000016489	gfm1	96	80.269	Acanthochromis_polyacanthus
ENSUMAG00000011268	GFM1	100	97.878	ENSAMEG00000013542	GFM1	100	97.878	Ailuropoda_melanoleuca
ENSUMAG00000011268	GFM1	96	76.446	ENSACIG00000014465	gfm1	94	76.446	Amphilophus_citrinellus
ENSUMAG00000011268	GFM1	96	80.305	ENSAOCG00000006023	gfm1	96	80.305	Amphiprion_ocellaris
ENSUMAG00000011268	GFM1	96	80.305	ENSAPEG00000024499	gfm1	99	80.195	Amphiprion_percula
ENSUMAG00000011268	GFM1	100	77.851	ENSATEG00000013789	gfm1	97	79.752	Anabas_testudineus
ENSUMAG00000011268	GFM1	96	82.645	ENSAPLG00000005022	GFM1	100	82.645	Anas_platyrhynchos
ENSUMAG00000011268	GFM1	96	82.944	ENSACAG00000006829	GFM1	98	82.944	Anolis_carolinensis
ENSUMAG00000011268	GFM1	100	91.379	ENSANAG00000035983	GFM1	98	92.234	Aotus_nancymaae
ENSUMAG00000011268	GFM1	96	81.818	ENSACLG00000016586	gfm1	99	80.357	Astatotilapia_calliptera
ENSUMAG00000011268	GFM1	100	78.968	ENSAMXG00000013435	gfm1	98	79.702	Astyanax_mexicanus
ENSUMAG00000011268	GFM1	100	94.297	ENSBTAG00000027795	GFM1	98	94.317	Bos_taurus
ENSUMAG00000011268	GFM1	97	55.360	WBGene00009246	gfm-1	99	55.214	Caenorhabditis_elegans
ENSUMAG00000011268	GFM1	100	91.512	ENSCJAG00000000363	GFM1	98	92.141	Callithrix_jacchus
ENSUMAG00000011268	GFM1	98	95.528	ENSCAFG00000009006	GFM1	100	97.041	Canis_familiaris
ENSUMAG00000011268	GFM1	98	95.805	ENSCAFG00020005878	GFM1	99	96.819	Canis_lupus_dingo
ENSUMAG00000011268	GFM1	100	94.828	ENSCHIG00000015220	GFM1	98	94.858	Capra_hircus
ENSUMAG00000011268	GFM1	100	94.032	ENSTSYG00000002013	GFM1	98	94.580	Carlito_syrichta
ENSUMAG00000011268	GFM1	96	81.319	ENSCAPG00000005699	GFM1	98	81.293	Cavia_aperea
ENSUMAG00000011268	GFM1	100	92.308	ENSCPOG00000001194	GFM1	98	92.828	Cavia_porcellus
ENSUMAG00000011268	GFM1	100	91.379	ENSCCAG00000025561	GFM1	98	91.973	Cebus_capucinus
ENSUMAG00000011268	GFM1	100	92.042	ENSCATG00000037622	GFM1	98	92.527	Cercocebus_atys
ENSUMAG00000011268	GFM1	98	91.486	ENSCLAG00000002503	GFM1	98	91.486	Chinchilla_lanigera
ENSUMAG00000011268	GFM1	100	92.042	ENSCSAG00000012162	GFM1	98	92.663	Chlorocebus_sabaeus
ENSUMAG00000011268	GFM1	100	83.687	ENSCHOG00000004867	GFM1	98	83.875	Choloepus_hoffmanni
ENSUMAG00000011268	GFM1	99	82.550	ENSCPBG00000018367	GFM1	98	82.815	Chrysemys_picta_bellii
ENSUMAG00000011268	GFM1	95	59.751	ENSCING00000011960	-	94	59.751	Ciona_intestinalis
ENSUMAG00000011268	GFM1	95	60.055	ENSCSAVG00000008514	-	99	60.055	Ciona_savignyi
ENSUMAG00000011268	GFM1	98	92.799	ENSCANG00000031714	GFM1	98	92.799	Colobus_angolensis_palliatus
ENSUMAG00000011268	GFM1	100	92.838	ENSCGRG00001022095	GFM1	98	93.369	Cricetulus_griseus_chok1gshd
ENSUMAG00000011268	GFM1	100	92.838	ENSCGRG00000012043	GFM1	98	93.369	Cricetulus_griseus_crigri
ENSUMAG00000011268	GFM1	95	76.634	ENSCSEG00000017088	gfm1	98	76.634	Cynoglossus_semilaevis
ENSUMAG00000011268	GFM1	96	82.940	ENSCVAG00000004126	gfm1	99	81.575	Cyprinodon_variegatus
ENSUMAG00000011268	GFM1	100	78.808	ENSDARG00000063624	gfm1	96	81.224	Danio_rerio
ENSUMAG00000011268	GFM1	54	91.443	ENSDNOG00000016385	-	100	91.443	Dasypus_novemcinctus
ENSUMAG00000011268	GFM1	100	90.186	ENSDORG00000014165	Gfm1	98	90.392	Dipodomys_ordii
ENSUMAG00000011268	GFM1	94	66.901	FBgn0263133	mEFG1	95	66.901	Drosophila_melanogaster
ENSUMAG00000011268	GFM1	98	82.996	ENSETEG00000019197	GFM1	98	82.996	Echinops_telfairi
ENSUMAG00000011268	GFM1	90	66.222	ENSEBUG00000012794	gfm1	99	66.222	Eptatretus_burgeri
ENSUMAG00000011268	GFM1	96	69.793	ENSEEUG00000000429	GFM1	99	69.793	Erinaceus_europaeus
ENSUMAG00000011268	GFM1	100	77.056	ENSELUG00000014728	gfm1	98	77.989	Esox_lucius
ENSUMAG00000011268	GFM1	100	96.419	ENSFCAG00000013291	GFM1	100	96.419	Felis_catus
ENSUMAG00000011268	GFM1	90	82.840	ENSFALG00000007619	GFM1	100	82.840	Ficedula_albicollis
ENSUMAG00000011268	GFM1	100	90.981	ENSFDAG00000016559	GFM1	98	91.475	Fukomys_damarensis
ENSUMAG00000011268	GFM1	96	80.992	ENSFHEG00000006091	gfm1	97	80.992	Fundulus_heteroclitus
ENSUMAG00000011268	GFM1	95	78.947	ENSGMOG00000010161	gfm1	99	78.947	Gadus_morhua
ENSUMAG00000011268	GFM1	99	80.481	ENSGALG00000009634	GFM1	98	82.094	Gallus_gallus
ENSUMAG00000011268	GFM1	100	79.973	ENSGAFG00000012527	gfm1	97	81.956	Gambusia_affinis
ENSUMAG00000011268	GFM1	99	77.984	ENSGACG00000009864	gfm1	97	79.586	Gasterosteus_aculeatus
ENSUMAG00000011268	GFM1	98	92.799	ENSGGOG00000003085	GFM1	98	92.799	Gorilla_gorilla
ENSUMAG00000011268	GFM1	96	81.956	ENSHBUG00000002120	gfm1	97	81.956	Haplochromis_burtoni
ENSUMAG00000011268	GFM1	100	91.247	ENSHGLG00000016855	GFM1	98	91.746	Heterocephalus_glaber_female
ENSUMAG00000011268	GFM1	100	91.247	ENSHGLG00100013049	GFM1	98	91.746	Heterocephalus_glaber_male
ENSUMAG00000011268	GFM1	96	80.583	ENSHCOG00000007638	gfm1	98	80.610	Hippocampus_comes
ENSUMAG00000011268	GFM1	100	78.912	ENSIPUG00000005873	gfm1	97	80.992	Ictalurus_punctatus
ENSUMAG00000011268	GFM1	98	92.547	ENSSTOG00000010150	GFM1	99	92.547	Ictidomys_tridecemlineatus
ENSUMAG00000011268	GFM1	100	92.175	ENSJJAG00000016447	Gfm1	98	92.693	Jaculus_jaculus
ENSUMAG00000011268	GFM1	96	79.477	ENSKMAG00000020768	gfm1	97	79.477	Kryptolebias_marmoratus
ENSUMAG00000011268	GFM1	93	80.627	ENSLBEG00000021315	gfm1	100	80.627	Labrus_bergylta
ENSUMAG00000011268	GFM1	100	79.045	ENSLACG00000012295	GFM1	99	80.548	Latimeria_chalumnae
ENSUMAG00000011268	GFM1	96	75.620	ENSLOCG00000003778	gfm1	99	75.309	Lepisosteus_oculatus
ENSUMAG00000011268	GFM1	97	89.688	ENSLAFG00000010945	GFM1	100	88.690	Loxodonta_africana
ENSUMAG00000011268	GFM1	100	92.308	ENSMFAG00000035731	GFM1	98	92.935	Macaca_fascicularis
ENSUMAG00000011268	GFM1	100	92.440	ENSMMUG00000004961	GFM1	98	93.071	Macaca_mulatta
ENSUMAG00000011268	GFM1	100	92.440	ENSMNEG00000033245	GFM1	98	92.935	Macaca_nemestrina
ENSUMAG00000011268	GFM1	96	91.310	ENSMLEG00000030908	GFM1	100	90.983	Mandrillus_leucophaeus
ENSUMAG00000011268	GFM1	96	81.129	ENSMAMG00000011760	gfm1	97	81.129	Mastacembelus_armatus
ENSUMAG00000011268	GFM1	96	81.956	ENSMZEG00005016639	gfm1	97	81.956	Maylandia_zebra
ENSUMAG00000011268	GFM1	96	81.931	ENSMGAG00000010641	GFM1	97	81.931	Meleagris_gallopavo
ENSUMAG00000011268	GFM1	99	93.968	ENSMAUG00000000611	Gfm1	98	94.046	Mesocricetus_auratus
ENSUMAG00000011268	GFM1	98	94.158	ENSMICG00000049086	GFM1	98	94.181	Microcebus_murinus
ENSUMAG00000011268	GFM1	100	92.308	ENSMOCG00000000465	Gfm1	98	92.693	Microtus_ochrogaster
ENSUMAG00000011268	GFM1	98	78.571	ENSMMOG00000012538	gfm1	97	80.250	Mola_mola
ENSUMAG00000011268	GFM1	99	85.638	ENSMODG00000015673	GFM1	98	87.070	Monodelphis_domestica
ENSUMAG00000011268	GFM1	99	79.060	ENSMALG00000012508	gfm1	98	79.484	Monopterus_albus
ENSUMAG00000011268	GFM1	100	92.042	MGP_CAROLIEiJ_G0025052	Gfm1	98	92.422	Mus_caroli
ENSUMAG00000011268	GFM1	100	92.042	ENSMUSG00000027774	Gfm1	98	92.422	Mus_musculus
ENSUMAG00000011268	GFM1	100	91.910	MGP_PahariEiJ_G0026495	Gfm1	98	92.287	Mus_pahari
ENSUMAG00000011268	GFM1	100	92.042	MGP_SPRETEiJ_G0025994	Gfm1	98	92.422	Mus_spretus
ENSUMAG00000011268	GFM1	100	96.286	ENSMPUG00000002859	GFM1	100	96.286	Mustela_putorius_furo
ENSUMAG00000011268	GFM1	100	93.501	ENSMLUG00000000452	GFM1	98	93.775	Myotis_lucifugus
ENSUMAG00000011268	GFM1	100	91.512	ENSNGAG00000012375	Gfm1	98	92.016	Nannospalax_galili
ENSUMAG00000011268	GFM1	96	81.793	ENSNBRG00000004631	gfm1	99	81.793	Neolamprologus_brichardi
ENSUMAG00000011268	GFM1	98	92.935	ENSNLEG00000004176	GFM1	98	92.935	Nomascus_leucogenys
ENSUMAG00000011268	GFM1	91	78.248	ENSMEUG00000007784	GFM1	100	78.248	Notamacropus_eugenii
ENSUMAG00000011268	GFM1	100	90.451	ENSOPRG00000009860	GFM1	98	92.044	Ochotona_princeps
ENSUMAG00000011268	GFM1	98	92.828	ENSODEG00000004316	GFM1	98	92.828	Octodon_degus
ENSUMAG00000011268	GFM1	96	81.956	ENSONIG00000003772	gfm1	97	81.956	Oreochromis_niloticus
ENSUMAG00000011268	GFM1	98	93.505	ENSOCUG00000013561	GFM1	98	93.505	Oryctolagus_cuniculus
ENSUMAG00000011268	GFM1	94	81.946	ENSORLG00000006487	gfm1	100	81.946	Oryzias_latipes
ENSUMAG00000011268	GFM1	97	81.037	ENSORLG00020003362	gfm1	98	81.037	Oryzias_latipes_hni
ENSUMAG00000011268	GFM1	97	80.628	ENSORLG00015005829	gfm1	98	80.628	Oryzias_latipes_hsok
ENSUMAG00000011268	GFM1	97	81.446	ENSOMEG00000012894	gfm1	98	81.446	Oryzias_melastigma
ENSUMAG00000011268	GFM1	100	92.573	ENSOGAG00000008298	GFM1	98	92.693	Otolemur_garnettii
ENSUMAG00000011268	GFM1	96	93.956	ENSOARG00000002409	GFM1	100	93.956	Ovis_aries
ENSUMAG00000011268	GFM1	98	92.799	ENSPPAG00000033881	GFM1	98	92.799	Pan_paniscus
ENSUMAG00000011268	GFM1	98	96.211	ENSPPRG00000009281	GFM1	98	96.211	Panthera_pardus
ENSUMAG00000011268	GFM1	98	96.076	ENSPTIG00000012416	GFM1	98	96.076	Panthera_tigris_altaica
ENSUMAG00000011268	GFM1	98	92.799	ENSPTRG00000015570	GFM1	98	92.799	Pan_troglodytes
ENSUMAG00000011268	GFM1	100	92.573	ENSPANG00000016512	GFM1	98	93.071	Papio_anubis
ENSUMAG00000011268	GFM1	95	82.312	ENSPKIG00000004876	gfm1	96	82.312	Paramormyrops_kingsleyae
ENSUMAG00000011268	GFM1	99	81.879	ENSPSIG00000012567	GFM1	98	82.138	Pelodiscus_sinensis
ENSUMAG00000011268	GFM1	95	79.473	ENSPMGG00000014068	gfm1	99	79.473	Periophthalmus_magnuspinnatus
ENSUMAG00000011268	GFM1	100	92.838	ENSPEMG00000008942	Gfm1	98	93.234	Peromyscus_maniculatus_bairdii
ENSUMAG00000011268	GFM1	84	85.285	ENSPCIG00000020195	GFM1	98	85.285	Phascolarctos_cinereus
ENSUMAG00000011268	GFM1	100	80.504	ENSPFOG00000011022	gfm1	97	82.507	Poecilia_formosa
ENSUMAG00000011268	GFM1	96	82.345	ENSPLAG00000019585	gfm1	97	81.739	Poecilia_latipinna
ENSUMAG00000011268	GFM1	100	80.371	ENSPMEG00000012376	gfm1	97	82.369	Poecilia_mexicana
ENSUMAG00000011268	GFM1	96	82.094	ENSPREG00000001332	gfm1	92	82.094	Poecilia_reticulata
ENSUMAG00000011268	GFM1	98	92.799	ENSPPYG00000014244	GFM1	98	92.799	Pongo_abelii
ENSUMAG00000011268	GFM1	93	88.193	ENSPCAG00000008934	GFM1	100	88.193	Procavia_capensis
ENSUMAG00000011268	GFM1	98	94.973	ENSPCOG00000022259	GFM1	98	94.993	Propithecus_coquereli
ENSUMAG00000011268	GFM1	100	94.032	ENSPVAG00000013605	GFM1	98	94.046	Pteropus_vampyrus
ENSUMAG00000011268	GFM1	96	81.680	ENSPNYG00000006037	gfm1	99	81.063	Pundamilia_nyererei
ENSUMAG00000011268	GFM1	100	79.576	ENSPNAG00000001237	gfm1	97	81.780	Pygocentrus_nattereri
ENSUMAG00000011268	GFM1	100	92.175	ENSRNOG00000012873	Gfm1	98	92.828	Rattus_norvegicus
ENSUMAG00000011268	GFM1	98	92.663	ENSRBIG00000031363	GFM1	98	92.663	Rhinopithecus_bieti
ENSUMAG00000011268	GFM1	98	92.799	ENSRROG00000031081	GFM1	98	92.799	Rhinopithecus_roxellana
ENSUMAG00000011268	GFM1	92	56.115	YLR069C	-	90	56.115	Saccharomyces_cerevisiae
ENSUMAG00000011268	GFM1	100	92.042	ENSSBOG00000023252	GFM1	98	92.527	Saimiri_boliviensis_boliviensis
ENSUMAG00000011268	GFM1	98	86.957	ENSSHAG00000017772	GFM1	98	87.009	Sarcophilus_harrisii
ENSUMAG00000011268	GFM1	96	80.907	ENSSFOG00015003117	gfm1	99	80.907	Scleropages_formosus
ENSUMAG00000011268	GFM1	100	76.923	ENSSMAG00000013221	gfm1	97	78.926	Scophthalmus_maximus
ENSUMAG00000011268	GFM1	98	79.111	ENSSDUG00000018665	gfm1	97	80.303	Seriola_dumerili
ENSUMAG00000011268	GFM1	98	79.004	ENSSLDG00000020606	gfm1	97	80.303	Seriola_lalandi_dorsalis
ENSUMAG00000011268	GFM1	95	81.224	ENSSPUG00000018686	GFM1	97	81.224	Sphenodon_punctatus
ENSUMAG00000011268	GFM1	96	80.303	ENSSPAG00000008800	gfm1	97	80.303	Stegastes_partitus
ENSUMAG00000011268	GFM1	100	93.642	ENSSSCG00000025651	GFM1	98	93.775	Sus_scrofa
ENSUMAG00000011268	GFM1	98	78.649	ENSTRUG00000009244	gfm1	99	78.649	Takifugu_rubripes
ENSUMAG00000011268	GFM1	97	80.628	ENSTNIG00000007729	gfm1	97	81.129	Tetraodon_nigroviridis
ENSUMAG00000011268	GFM1	98	77.868	ENSTBEG00000017404	GFM1	98	77.868	Tupaia_belangeri
ENSUMAG00000011268	GFM1	100	92.612	ENSTTRG00000001735	GFM1	97	93.640	Tursiops_truncatus
ENSUMAG00000011268	GFM1	100	99.867	ENSUAMG00000026381	GFM1	100	99.867	Ursus_americanus
ENSUMAG00000011268	GFM1	100	90.981	ENSVPAG00000009444	GFM1	98	90.934	Vicugna_pacos
ENSUMAG00000011268	GFM1	99	94.133	ENSVVUG00000020091	GFM1	100	96.598	Vulpes_vulpes
ENSUMAG00000011268	GFM1	100	82.781	ENSXETG00000032551	GFM1	97	84.060	Xenopus_tropicalis
ENSUMAG00000011268	GFM1	51	81.443	ENSXCOG00000012590	gfm1	89	81.443	Xiphophorus_couchianus
ENSUMAG00000011268	GFM1	96	82.094	ENSXMAG00000000261	gfm1	97	82.094	Xiphophorus_maculatus