EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000011295 (Gene tree)
Gene ID: 103670046
Gene Symbol: SRRT
Alias: -
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 12260 bases
Position: chrKK498641.1:7411263-7423522
Accession: 103670046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000015398	ARS2	PF04959.13	1.2e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000018218	SRRT-201	3210	-	ENSUMAP00000015398	876 (aa)	XP_008696661	UPI0004DFEB7A

Gene Model

Click here to download ENSUMAG00000011295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000011295's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000011295	SRRT	100	98.744	ENSG00000087087	SRRT	99	100.000	Homo_sapiens
ENSUMAG00000011295	SRRT	53	75.914	ENSAPOG00000002304	srrt	96	63.711	Acanthochromis_polyacanthus
ENSUMAG00000011295	SRRT	100	95.465	ENSAMEG00000014506	SRRT	100	95.465	Ailuropoda_melanoleuca
ENSUMAG00000011295	SRRT	79	75.699	ENSACIG00000015795	srrt	85	75.699	Amphilophus_citrinellus
ENSUMAG00000011295	SRRT	93	54.893	ENSAOCG00000009189	-	96	57.307	Amphiprion_ocellaris
ENSUMAG00000011295	SRRT	84	76.129	ENSAOCG00000009693	srrt	83	76.129	Amphiprion_ocellaris
ENSUMAG00000011295	SRRT	93	54.893	ENSAPEG00000020016	-	96	57.307	Amphiprion_percula
ENSUMAG00000011295	SRRT	84	75.699	ENSAPEG00000003646	srrt	85	75.699	Amphiprion_percula
ENSUMAG00000011295	SRRT	55	61.723	ENSATEG00000003652	-	85	64.092	Anabas_testudineus
ENSUMAG00000011295	SRRT	84	73.548	ENSATEG00000014425	srrt	83	74.409	Anabas_testudineus
ENSUMAG00000011295	SRRT	95	76.540	ENSACAG00000001014	SRRT	96	77.476	Anolis_carolinensis
ENSUMAG00000011295	SRRT	100	98.288	ENSANAG00000031718	SRRT	100	98.288	Aotus_nancymaae
ENSUMAG00000011295	SRRT	93	52.128	ENSACLG00000009423	-	96	55.454	Astatotilapia_calliptera
ENSUMAG00000011295	SRRT	53	74.409	ENSACLG00000013156	srrt	50	74.409	Astatotilapia_calliptera
ENSUMAG00000011295	SRRT	52	75.381	ENSAMXG00000016671	srrt	93	65.340	Astyanax_mexicanus
ENSUMAG00000011295	SRRT	100	97.831	ENSBTAG00000001134	SRRT	100	97.831	Bos_taurus
ENSUMAG00000011295	SRRT	60	47.656	WBGene00017085	E01A2.2	85	42.505	Caenorhabditis_elegans
ENSUMAG00000011295	SRRT	100	98.059	ENSCJAG00000014917	SRRT	100	98.059	Callithrix_jacchus
ENSUMAG00000011295	SRRT	100	99.315	ENSCAFG00000023538	SRRT	100	99.315	Canis_familiaris
ENSUMAG00000011295	SRRT	100	98.744	ENSCAFG00020013358	SRRT	100	98.744	Canis_lupus_dingo
ENSUMAG00000011295	SRRT	100	97.831	ENSCHIG00000010495	SRRT	100	97.831	Capra_hircus
ENSUMAG00000011295	SRRT	96	93.690	ENSTSYG00000036426	SRRT	99	94.019	Carlito_syrichta
ENSUMAG00000011295	SRRT	95	96.168	ENSCAPG00000013586	SRRT	100	96.168	Cavia_aperea
ENSUMAG00000011295	SRRT	100	98.176	ENSCPOG00000001739	SRRT	100	98.176	Cavia_porcellus
ENSUMAG00000011295	SRRT	100	98.516	ENSCCAG00000015877	SRRT	100	98.516	Cebus_capucinus
ENSUMAG00000011295	SRRT	100	98.288	ENSCATG00000036306	SRRT	100	98.288	Cercocebus_atys
ENSUMAG00000011295	SRRT	100	98.402	ENSCLAG00000007568	SRRT	100	98.402	Chinchilla_lanigera
ENSUMAG00000011295	SRRT	100	98.630	ENSCSAG00000017996	SRRT	100	98.630	Chlorocebus_sabaeus
ENSUMAG00000011295	SRRT	67	80.339	ENSCHOG00000007815	SRRT	67	95.294	Choloepus_hoffmanni
ENSUMAG00000011295	SRRT	74	82.443	ENSCPBG00000011553	SRRT	83	82.397	Chrysemys_picta_bellii
ENSUMAG00000011295	SRRT	100	42.215	ENSCING00000003506	-	54	52.075	Ciona_intestinalis
ENSUMAG00000011295	SRRT	100	40.497	ENSCSAVG00000008394	-	79	55.172	Ciona_savignyi
ENSUMAG00000011295	SRRT	100	97.945	ENSCANG00000034556	SRRT	100	97.945	Colobus_angolensis_palliatus
ENSUMAG00000011295	SRRT	100	97.039	ENSCGRG00001001594	Srrt	100	97.039	Cricetulus_griseus_chok1gshd
ENSUMAG00000011295	SRRT	98	88.605	ENSCGRG00000007292	Srrt	98	88.953	Cricetulus_griseus_crigri
ENSUMAG00000011295	SRRT	93	52.549	ENSCSEG00000005233	-	54	63.136	Cynoglossus_semilaevis
ENSUMAG00000011295	SRRT	53	66.809	ENSCSEG00000017878	srrt	96	60.990	Cynoglossus_semilaevis
ENSUMAG00000011295	SRRT	95	64.136	ENSCVAG00000019848	srrt	96	64.923	Cyprinodon_variegatus
ENSUMAG00000011295	SRRT	90	54.981	ENSCVAG00000017344	-	95	54.623	Cyprinodon_variegatus
ENSUMAG00000011295	SRRT	53	75.751	ENSDARG00000017762	srrt	51	77.253	Danio_rerio
ENSUMAG00000011295	SRRT	100	98.402	ENSDNOG00000003851	SRRT	100	98.402	Dasypus_novemcinctus
ENSUMAG00000011295	SRRT	100	96.473	ENSDORG00000005584	Srrt	100	96.473	Dipodomys_ordii
ENSUMAG00000011295	SRRT	100	39.900	FBgn0033062	Ars2	67	53.066	Drosophila_melanogaster
ENSUMAG00000011295	SRRT	86	94.737	ENSETEG00000016175	SRRT	82	94.737	Echinops_telfairi
ENSUMAG00000011295	SRRT	63	62.500	ENSEBUG00000008517	-	76	65.278	Eptatretus_burgeri
ENSUMAG00000011295	SRRT	100	99.201	ENSEASG00005016956	SRRT	100	99.201	Equus_asinus_asinus
ENSUMAG00000011295	SRRT	100	99.315	ENSECAG00000012292	SRRT	100	99.315	Equus_caballus
ENSUMAG00000011295	SRRT	85	97.727	ENSEEUG00000009117	SRRT	85	97.727	Erinaceus_europaeus
ENSUMAG00000011295	SRRT	93	55.858	ENSELUG00000021216	-	53	64.449	Esox_lucius
ENSUMAG00000011295	SRRT	100	99.543	ENSFCAG00000006855	SRRT	100	99.543	Felis_catus
ENSUMAG00000011295	SRRT	58	52.564	ENSFALG00000007524	-	79	75.000	Ficedula_albicollis
ENSUMAG00000011295	SRRT	100	93.493	ENSFDAG00000021347	SRRT	98	93.341	Fukomys_damarensis
ENSUMAG00000011295	SRRT	55	54.582	ENSFHEG00000004105	-	93	55.508	Fundulus_heteroclitus
ENSUMAG00000011295	SRRT	74	74.672	ENSFHEG00000002756	srrt	86	75.431	Fundulus_heteroclitus
ENSUMAG00000011295	SRRT	95	60.859	ENSGMOG00000018619	srrt	51	70.299	Gadus_morhua
ENSUMAG00000011295	SRRT	93	52.842	ENSGAFG00000020383	-	96	53.946	Gambusia_affinis
ENSUMAG00000011295	SRRT	53	74.624	ENSGAFG00000005423	srrt	96	63.657	Gambusia_affinis
ENSUMAG00000011295	SRRT	95	63.128	ENSGACG00000020387	srrt	51	74.359	Gasterosteus_aculeatus
ENSUMAG00000011295	SRRT	93	51.601	ENSGACG00000001100	-	53	61.345	Gasterosteus_aculeatus
ENSUMAG00000011295	SRRT	100	98.744	ENSGGOG00000001508	SRRT	99	98.744	Gorilla_gorilla
ENSUMAG00000011295	SRRT	53	74.624	ENSHBUG00000002942	srrt	50	74.624	Haplochromis_burtoni
ENSUMAG00000011295	SRRT	100	97.267	ENSHGLG00000008344	Srrt	100	97.267	Heterocephalus_glaber_female
ENSUMAG00000011295	SRRT	100	97.374	ENSHGLG00100018857	Srrt	100	97.374	Heterocephalus_glaber_male
ENSUMAG00000011295	SRRT	93	51.961	ENSHCOG00000008904	-	95	51.716	Hippocampus_comes
ENSUMAG00000011295	SRRT	98	62.937	ENSHCOG00000005403	srrt	96	63.020	Hippocampus_comes
ENSUMAG00000011295	SRRT	53	75.161	ENSIPUG00000021150	srrt	51	76.017	Ictalurus_punctatus
ENSUMAG00000011295	SRRT	100	97.945	ENSSTOG00000013776	SRRT	100	97.945	Ictidomys_tridecemlineatus
ENSUMAG00000011295	SRRT	100	95.776	ENSJJAG00000010446	Srrt	100	95.776	Jaculus_jaculus
ENSUMAG00000011295	SRRT	93	53.901	ENSKMAG00000008468	-	96	55.137	Kryptolebias_marmoratus
ENSUMAG00000011295	SRRT	95	64.601	ENSKMAG00000013599	srrt	96	63.521	Kryptolebias_marmoratus
ENSUMAG00000011295	SRRT	53	74.678	ENSLBEG00000016308	srrt	54	76.445	Labrus_bergylta
ENSUMAG00000011295	SRRT	95	64.846	ENSLACG00000001089	SRRT	96	64.353	Latimeria_chalumnae
ENSUMAG00000011295	SRRT	67	81.346	ENSLOCG00000013658	srrt	52	69.032	Lepisosteus_oculatus
ENSUMAG00000011295	SRRT	100	98.402	ENSLAFG00000007725	SRRT	100	98.402	Loxodonta_africana
ENSUMAG00000011295	SRRT	100	98.059	ENSMFAG00000033745	SRRT	100	98.059	Macaca_fascicularis
ENSUMAG00000011295	SRRT	100	98.630	ENSMMUG00000021255	SRRT	100	98.630	Macaca_mulatta
ENSUMAG00000011295	SRRT	100	98.630	ENSMNEG00000041864	SRRT	100	98.630	Macaca_nemestrina
ENSUMAG00000011295	SRRT	100	98.059	ENSMLEG00000029479	SRRT	100	98.059	Mandrillus_leucophaeus
ENSUMAG00000011295	SRRT	93	53.270	ENSMAMG00000010681	-	96	57.043	Mastacembelus_armatus
ENSUMAG00000011295	SRRT	53	73.333	ENSMAMG00000014311	srrt	96	65.589	Mastacembelus_armatus
ENSUMAG00000011295	SRRT	53	74.409	ENSMZEG00005016135	srrt	50	74.409	Maylandia_zebra
ENSUMAG00000011295	SRRT	93	52.128	ENSMZEG00005028002	-	96	55.454	Maylandia_zebra
ENSUMAG00000011295	SRRT	100	96.689	ENSMAUG00000011386	Srrt	100	96.689	Mesocricetus_auratus
ENSUMAG00000011295	SRRT	100	98.516	ENSMICG00000009471	SRRT	100	98.516	Microcebus_murinus
ENSUMAG00000011295	SRRT	100	96.918	ENSMOCG00000001971	Srrt	100	96.918	Microtus_ochrogaster
ENSUMAG00000011295	SRRT	95	65.957	ENSMMOG00000016399	srrt	54	74.359	Mola_mola
ENSUMAG00000011295	SRRT	87	55.071	ENSMMOG00000011137	-	55	65.672	Mola_mola
ENSUMAG00000011295	SRRT	54	89.562	ENSMODG00000004862	SRRT	90	90.664	Monodelphis_domestica
ENSUMAG00000011295	SRRT	59	49.027	ENSMALG00000005567	-	84	52.043	Monopterus_albus
ENSUMAG00000011295	SRRT	90	61.963	ENSMALG00000018604	srrt	80	71.398	Monopterus_albus
ENSUMAG00000011295	SRRT	100	97.260	MGP_CAROLIEiJ_G0027870	Srrt	100	97.794	Mus_caroli
ENSUMAG00000011295	SRRT	100	97.260	ENSMUSG00000037364	Srrt	100	97.260	Mus_musculus
ENSUMAG00000011295	SRRT	100	97.032	MGP_PahariEiJ_G0024456	Srrt	100	97.426	Mus_pahari
ENSUMAG00000011295	SRRT	100	97.260	MGP_SPRETEiJ_G0028875	Srrt	100	97.794	Mus_spretus
ENSUMAG00000011295	SRRT	100	99.429	ENSMPUG00000015839	SRRT	100	99.429	Mustela_putorius_furo
ENSUMAG00000011295	SRRT	100	98.402	ENSMLUG00000009975	SRRT	100	98.402	Myotis_lucifugus
ENSUMAG00000011295	SRRT	100	97.374	ENSNGAG00000023715	Srrt	100	97.374	Nannospalax_galili
ENSUMAG00000011295	SRRT	53	72.903	ENSNBRG00000019100	srrt	96	62.485	Neolamprologus_brichardi
ENSUMAG00000011295	SRRT	95	87.124	ENSNLEG00000011987	SRRT	99	84.915	Nomascus_leucogenys
ENSUMAG00000011295	SRRT	98	74.710	ENSMEUG00000011941	SRRT	98	74.246	Notamacropus_eugenii
ENSUMAG00000011295	SRRT	62	100.000	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSUMAG00000011295	SRRT	100	96.804	ENSODEG00000016856	SRRT	100	96.804	Octodon_degus
ENSUMAG00000011295	SRRT	53	74.839	ENSONIG00000004242	srrt	96	66.317	Oreochromis_niloticus
ENSUMAG00000011295	SRRT	93	53.783	ENSONIG00000016080	-	95	54.724	Oreochromis_niloticus
ENSUMAG00000011295	SRRT	96	65.202	ENSORLG00000008120	srrt	52	73.978	Oryzias_latipes
ENSUMAG00000011295	SRRT	96	65.167	ENSORLG00020003058	srrt	96	64.129	Oryzias_latipes_hni
ENSUMAG00000011295	SRRT	96	65.473	ENSORLG00015008062	srrt	96	64.014	Oryzias_latipes_hsok
ENSUMAG00000011295	SRRT	93	56.083	ENSOMEG00000006963	-	96	56.419	Oryzias_melastigma
ENSUMAG00000011295	SRRT	96	65.621	ENSOMEG00000003155	srrt	96	63.986	Oryzias_melastigma
ENSUMAG00000011295	SRRT	100	98.858	ENSOGAG00000017242	SRRT	100	98.858	Otolemur_garnettii
ENSUMAG00000011295	SRRT	100	97.260	ENSOARG00000015645	SRRT	100	97.260	Ovis_aries
ENSUMAG00000011295	SRRT	100	98.059	ENSPPAG00000041090	SRRT	100	98.059	Pan_paniscus
ENSUMAG00000011295	SRRT	100	98.630	ENSPPRG00000009557	SRRT	100	98.630	Panthera_pardus
ENSUMAG00000011295	SRRT	100	99.429	ENSPTIG00000014355	SRRT	100	99.429	Panthera_tigris_altaica
ENSUMAG00000011295	SRRT	100	98.059	ENSPTRG00000019511	SRRT	100	98.059	Pan_troglodytes
ENSUMAG00000011295	SRRT	97	96.163	ENSPANG00000020763	SRRT	98	96.163	Papio_anubis
ENSUMAG00000011295	SRRT	96	69.484	ENSPKIG00000005434	srrt	96	66.516	Paramormyrops_kingsleyae
ENSUMAG00000011295	SRRT	94	66.507	ENSPKIG00000022212	-	96	67.138	Paramormyrops_kingsleyae
ENSUMAG00000011295	SRRT	95	79.478	ENSPSIG00000016311	SRRT	96	81.110	Pelodiscus_sinensis
ENSUMAG00000011295	SRRT	53	74.194	ENSPMGG00000002841	srrt	96	63.971	Periophthalmus_magnuspinnatus
ENSUMAG00000011295	SRRT	100	95.434	ENSPEMG00000010834	Srrt	100	95.434	Peromyscus_maniculatus_bairdii
ENSUMAG00000011295	SRRT	96	55.399	ENSPMAG00000009614	-	55	64.496	Petromyzon_marinus
ENSUMAG00000011295	SRRT	98	92.343	ENSPCIG00000000816	SRRT	98	92.459	Phascolarctos_cinereus
ENSUMAG00000011295	SRRT	93	52.253	ENSPFOG00000016554	-	54	60.805	Poecilia_formosa
ENSUMAG00000011295	SRRT	53	74.678	ENSPFOG00000005704	srrt	96	63.668	Poecilia_formosa
ENSUMAG00000011295	SRRT	93	52.068	ENSPLAG00000004526	-	55	60.465	Poecilia_latipinna
ENSUMAG00000011295	SRRT	95	63.657	ENSPLAG00000021992	srrt	96	61.530	Poecilia_latipinna
ENSUMAG00000011295	SRRT	79	74.249	ENSPMEG00000001182	srrt	96	63.889	Poecilia_mexicana
ENSUMAG00000011295	SRRT	90	51.382	ENSPMEG00000001520	-	53	59.732	Poecilia_mexicana
ENSUMAG00000011295	SRRT	95	64.509	ENSPREG00000022308	srrt	96	63.552	Poecilia_reticulata
ENSUMAG00000011295	SRRT	100	88.584	ENSPPYG00000017432	SRRT	100	88.584	Pongo_abelii
ENSUMAG00000011295	SRRT	100	94.344	ENSPCAG00000001621	SRRT	100	94.344	Procavia_capensis
ENSUMAG00000011295	SRRT	100	98.744	ENSPCOG00000025751	SRRT	100	98.744	Propithecus_coquereli
ENSUMAG00000011295	SRRT	78	91.618	ENSPVAG00000000834	SRRT	100	91.618	Pteropus_vampyrus
ENSUMAG00000011295	SRRT	53	74.409	ENSPNYG00000018710	srrt	52	74.409	Pundamilia_nyererei
ENSUMAG00000011295	SRRT	76	70.732	ENSPNAG00000010629	srrt	95	52.697	Pygocentrus_nattereri
ENSUMAG00000011295	SRRT	54	85.775	ENSRNOG00000048277	AABR07035787.1	93	85.775	Rattus_norvegicus
ENSUMAG00000011295	SRRT	100	98.630	ENSRBIG00000035718	SRRT	100	98.630	Rhinopithecus_bieti
ENSUMAG00000011295	SRRT	100	98.630	ENSRROG00000030622	SRRT	100	98.630	Rhinopithecus_roxellana
ENSUMAG00000011295	SRRT	100	98.516	ENSSBOG00000033570	SRRT	100	98.516	Saimiri_boliviensis_boliviensis
ENSUMAG00000011295	SRRT	72	88.836	ENSSHAG00000007349	-	100	88.836	Sarcophilus_harrisii
ENSUMAG00000011295	SRRT	94	69.357	ENSSFOG00015017293	srrt	96	69.590	Scleropages_formosus
ENSUMAG00000011295	SRRT	95	64.439	ENSSMAG00000015342	srrt	52	75.054	Scophthalmus_maximus
ENSUMAG00000011295	SRRT	53	61.216	ENSSMAG00000018195	-	98	52.859	Scophthalmus_maximus
ENSUMAG00000011295	SRRT	53	74.624	ENSSDUG00000012049	srrt	96	65.603	Seriola_dumerili
ENSUMAG00000011295	SRRT	55	53.579	ENSSDUG00000002051	-	93	54.219	Seriola_dumerili
ENSUMAG00000011295	SRRT	84	74.409	ENSSLDG00000017477	srrt	81	75.269	Seriola_lalandi_dorsalis
ENSUMAG00000011295	SRRT	53	74.786	ENSSPAG00000005665	srrt	94	64.937	Stegastes_partitus
ENSUMAG00000011295	SRRT	82	51.630	ENSSPAG00000018943	-	95	55.528	Stegastes_partitus
ENSUMAG00000011295	SRRT	95	95.187	ENSSSCG00000024789	SRRT	100	95.187	Sus_scrofa
ENSUMAG00000011295	SRRT	90	54.239	ENSTRUG00000000023	-	94	52.990	Takifugu_rubripes
ENSUMAG00000011295	SRRT	96	64.294	ENSTRUG00000016075	srrt	96	65.629	Takifugu_rubripes
ENSUMAG00000011295	SRRT	74	62.367	ENSTNIG00000011779	srrt	100	61.848	Tetraodon_nigroviridis
ENSUMAG00000011295	SRRT	93	51.322	ENSTNIG00000003111	-	53	61.441	Tetraodon_nigroviridis
ENSUMAG00000011295	SRRT	67	96.641	ENSTBEG00000005212	SRRT	66	96.641	Tupaia_belangeri
ENSUMAG00000011295	SRRT	100	98.174	ENSTTRG00000011104	SRRT	100	98.174	Tursiops_truncatus
ENSUMAG00000011295	SRRT	95	100.000	ENSUAMG00000027997	SRRT	98	100.000	Ursus_americanus
ENSUMAG00000011295	SRRT	100	99.315	ENSVVUG00000023572	SRRT	100	99.315	Vulpes_vulpes
ENSUMAG00000011295	SRRT	71	81.366	ENSXETG00000025124	srrt	96	61.827	Xenopus_tropicalis
ENSUMAG00000011295	SRRT	53	50.855	ENSXCOG00000013105	-	90	51.068	Xiphophorus_couchianus
ENSUMAG00000011295	SRRT	93	52.862	ENSXMAG00000002090	-	96	53.420	Xiphophorus_maculatus
ENSUMAG00000011295	SRRT	96	64.005	ENSXMAG00000007627	srrt	85	75.054	Xiphophorus_maculatus