EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000011345 (Gene tree)
Gene ID: 103657923
Gene Symbol: SEPT1
Alias: DIFF6|PNUTL3
Full Name: septin 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 4153 bases
Position: chrKK498539.1:3213440-3217592
Accession: 103657923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000015457	MMR_HSR1	PF01926.23	3e-08	1	1
ENSUMAP00000015453	MMR_HSR1	PF01926.23	4.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000018289	SEPT1-202	1442	XM_008685378	ENSUMAP00000015457	367 (aa)	XP_008683600	-
ENSUMAT00000018294	SEPT1-203	1355	-	ENSUMAP00000015462	338 (aa)	-	-
ENSUMAT00000018284	SEPT1-201	1619	-	ENSUMAP00000015453	426 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000011345's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000011345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000011345	SEPT1	78	36.111	ENSUMAG00000002994	SEPT12	84	44.755
ENSUMAG00000011345	SEPT1	90	51.057	ENSUMAG00000003231	SEPT7	85	47.205
ENSUMAG00000011345	SEPT1	85	39.241	ENSUMAG00000018131	SEPT8	72	39.241
ENSUMAG00000011345	SEPT1	94	55.652	ENSUMAG00000010525	SEPT2	89	55.780
ENSUMAG00000011345	SEPT1	92	41.108	ENSUMAG00000007904	SEPT11	73	41.691
ENSUMAG00000011345	SEPT1	83	47.097	ENSUMAG00000020618	-	91	47.097
ENSUMAG00000011345	SEPT1	97	65.278	ENSUMAG00000022793	SEPT4	92	65.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000011345	SEPT1	100	96.730	ENSG00000180096	SEPT1	89	96.730	Homo_sapiens
ENSUMAG00000011345	SEPT1	99	97.820	ENSAMEG00000007865	SEPT1	100	97.826	Ailuropoda_melanoleuca
ENSUMAG00000011345	SEPT1	100	95.913	ENSANAG00000029084	SEPT1	100	95.913	Aotus_nancymaae
ENSUMAG00000011345	SEPT1	100	97.548	ENSBTAG00000021219	SEPT1	100	97.548	Bos_taurus
ENSUMAG00000011345	SEPT1	100	94.550	ENSCJAG00000002577	SEPT1	89	94.550	Callithrix_jacchus
ENSUMAG00000011345	SEPT1	99	98.087	ENSCAFG00000016576	SEPT1	100	98.093	Canis_familiaris
ENSUMAG00000011345	SEPT1	99	98.087	ENSCAFG00020017813	SEPT1	99	98.098	Canis_lupus_dingo
ENSUMAG00000011345	SEPT1	100	94.667	ENSCHIG00000017447	SEPT1	100	94.667	Capra_hircus
ENSUMAG00000011345	SEPT1	100	95.913	ENSTSYG00000035596	SEPT1	100	95.913	Carlito_syrichta
ENSUMAG00000011345	SEPT1	100	74.728	ENSCAPG00000001347	SEPT1	100	74.728	Cavia_aperea
ENSUMAG00000011345	SEPT1	99	92.643	ENSCPOG00000003088	SEPT1	99	92.663	Cavia_porcellus
ENSUMAG00000011345	SEPT1	100	82.834	ENSCCAG00000030164	SEPT1	92	81.501	Cebus_capucinus
ENSUMAG00000011345	SEPT1	100	96.458	ENSCATG00000037250	SEPT1	99	96.458	Cercocebus_atys
ENSUMAG00000011345	SEPT1	99	94.823	ENSCLAG00000010486	SEPT1	100	95.000	Chinchilla_lanigera
ENSUMAG00000011345	SEPT1	100	96.458	ENSCSAG00000006056	SEPT1	99	96.458	Chlorocebus_sabaeus
ENSUMAG00000011345	SEPT1	100	96.185	ENSCANG00000035786	SEPT1	89	96.185	Colobus_angolensis_palliatus
ENSUMAG00000011345	SEPT1	100	94.550	ENSCGRG00001003374	Sept1	100	94.550	Cricetulus_griseus_chok1gshd
ENSUMAG00000011345	SEPT1	100	93.733	ENSCGRG00000004919	Sept1	100	93.733	Cricetulus_griseus_crigri
ENSUMAG00000011345	SEPT1	100	97.003	ENSDNOG00000014680	SEPT1	95	88.564	Dasypus_novemcinctus
ENSUMAG00000011345	SEPT1	100	96.185	ENSDORG00000011443	Sept1	100	96.185	Dipodomys_ordii
ENSUMAG00000011345	SEPT1	92	97.345	ENSEASG00005013153	SEPT1	100	97.345	Equus_asinus_asinus
ENSUMAG00000011345	SEPT1	100	97.548	ENSECAG00000009390	SEPT1	96	97.548	Equus_caballus
ENSUMAG00000011345	SEPT1	100	95.368	ENSEEUG00000007661	SEPT1	100	95.368	Erinaceus_europaeus
ENSUMAG00000011345	SEPT1	100	98.093	ENSFCAG00000013541	SEPT1	94	98.093	Felis_catus
ENSUMAG00000011345	SEPT1	100	75.134	ENSGGOG00000017024	SEPT1	88	75.134	Gorilla_gorilla
ENSUMAG00000011345	SEPT1	100	97.548	ENSSTOG00000002782	SEPT1	100	97.548	Ictidomys_tridecemlineatus
ENSUMAG00000011345	SEPT1	100	94.550	ENSJJAG00000023131	Sept1	100	94.550	Jaculus_jaculus
ENSUMAG00000011345	SEPT1	99	95.628	ENSLAFG00000027789	SEPT1	100	95.640	Loxodonta_africana
ENSUMAG00000011345	SEPT1	100	96.458	ENSMFAG00000031504	SEPT1	89	96.458	Macaca_fascicularis
ENSUMAG00000011345	SEPT1	100	90.191	ENSMMUG00000021842	SEPT1	97	97.050	Macaca_mulatta
ENSUMAG00000011345	SEPT1	100	84.783	ENSMNEG00000041695	SEPT1	89	84.783	Macaca_nemestrina
ENSUMAG00000011345	SEPT1	100	88.011	ENSMLEG00000039481	SEPT1	88	88.011	Mandrillus_leucophaeus
ENSUMAG00000011345	SEPT1	100	95.640	ENSMAUG00000009531	Sept1	100	95.640	Mesocricetus_auratus
ENSUMAG00000011345	SEPT1	99	97.268	ENSMICG00000011817	SEPT1	99	94.286	Microcebus_murinus
ENSUMAG00000011345	SEPT1	100	94.823	ENSMOCG00000017518	Sept1	100	94.823	Microtus_ochrogaster
ENSUMAG00000011345	SEPT1	100	95.095	MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	Mus_caroli
ENSUMAG00000011345	SEPT1	100	95.368	ENSMUSG00000000486	Sept1	100	97.241	Mus_musculus
ENSUMAG00000011345	SEPT1	100	95.095	MGP_PahariEiJ_G0013702	Sept1	100	96.552	Mus_pahari
ENSUMAG00000011345	SEPT1	100	95.095	MGP_SPRETEiJ_G0031606	Sept1	100	96.552	Mus_spretus
ENSUMAG00000011345	SEPT1	99	96.721	ENSMLUG00000006749	SEPT1	100	96.730	Myotis_lucifugus
ENSUMAG00000011345	SEPT1	100	95.913	ENSNGAG00000021368	Sept1	100	95.913	Nannospalax_galili
ENSUMAG00000011345	SEPT1	99	90.710	ENSMEUG00000000492	SEPT1	100	89.617	Notamacropus_eugenii
ENSUMAG00000011345	SEPT1	100	93.460	ENSOPRG00000007981	SEPT1	100	93.460	Ochotona_princeps
ENSUMAG00000011345	SEPT1	100	93.478	ENSODEG00000014531	SEPT1	100	93.478	Octodon_degus
ENSUMAG00000011345	SEPT1	100	88.556	ENSOANG00000005331	SEPT1	100	87.738	Ornithorhynchus_anatinus
ENSUMAG00000011345	SEPT1	99	97.814	ENSOGAG00000013350	SEPT1	100	97.820	Otolemur_garnettii
ENSUMAG00000011345	SEPT1	99	96.739	ENSOARG00000006135	SEPT1	100	96.748	Ovis_aries
ENSUMAG00000011345	SEPT1	100	77.657	ENSPPAG00000032680	SEPT1	87	77.657	Pan_paniscus
ENSUMAG00000011345	SEPT1	99	98.087	ENSPPRG00000008648	-	100	98.087	Panthera_pardus
ENSUMAG00000011345	SEPT1	84	97.727	ENSPTIG00000006718	SEPT1	87	97.727	Panthera_tigris_altaica
ENSUMAG00000011345	SEPT1	100	96.730	ENSPTRG00000007998	SEPT1	89	96.730	Pan_troglodytes
ENSUMAG00000011345	SEPT1	100	88.011	ENSPANG00000032364	SEPT1	99	88.011	Papio_anubis
ENSUMAG00000011345	SEPT1	100	95.640	ENSPEMG00000023616	Sept1	100	95.640	Peromyscus_maniculatus_bairdii
ENSUMAG00000011345	SEPT1	100	91.008	ENSPCIG00000001537	SEPT1	100	89.918	Phascolarctos_cinereus
ENSUMAG00000011345	SEPT1	84	96.429	ENSPPYG00000007270	-	100	96.429	Pongo_abelii
ENSUMAG00000011345	SEPT1	100	94.550	ENSPCAG00000009042	SEPT1	100	94.550	Procavia_capensis
ENSUMAG00000011345	SEPT1	100	97.275	ENSPCOG00000028121	SEPT1	92	95.968	Propithecus_coquereli
ENSUMAG00000011345	SEPT1	100	98.638	ENSPVAG00000008655	SEPT1	100	98.638	Pteropus_vampyrus
ENSUMAG00000011345	SEPT1	100	94.550	ENSRNOG00000017804	Sept1	100	94.550	Rattus_norvegicus
ENSUMAG00000011345	SEPT1	100	95.913	ENSRBIG00000036580	SEPT1	89	95.913	Rhinopithecus_bieti
ENSUMAG00000011345	SEPT1	100	95.913	ENSRROG00000038708	SEPT1	99	95.913	Rhinopithecus_roxellana
ENSUMAG00000011345	SEPT1	100	95.095	ENSSBOG00000021733	SEPT1	89	95.095	Saimiri_boliviensis_boliviensis
ENSUMAG00000011345	SEPT1	99	90.164	ENSSHAG00000006478	SEPT1	99	89.101	Sarcophilus_harrisii
ENSUMAG00000011345	SEPT1	100	97.548	ENSSSCG00000007800	SEPT1	100	97.548	Sus_scrofa
ENSUMAG00000011345	SEPT1	100	97.820	ENSTTRG00000017272	SEPT1	100	97.820	Tursiops_truncatus
ENSUMAG00000011345	SEPT1	100	100.000	ENSUAMG00000027438	SEPT1	99	100.000	Ursus_americanus
ENSUMAG00000011345	SEPT1	92	97.619	ENSVVUG00000026116	SEPT1	90	97.619	Vulpes_vulpes