EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000011788 (Gene tree)
Gene ID: 103678159
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 27356 bases
Position: chrKK498745.1:770523-797878
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000016040	CPSF_A	PF03178.15	1.3e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000018978	DDB1-201	3397	-	ENSUMAP00000016040	1098 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000011788's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03420	Nucleotide excision repair	KEGG
umr04120	Ubiquitin mediated proteolysis	KEGG
umr05161	Hepatitis B	KEGG
umr05170	Human immunodeficiency virus 1 infection	KEGG
umr05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000011788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000011788	DDB1	98	99.720	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSUMAG00000011788	DDB1	98	91.442	ENSAPOG00000005036	ddb1	99	91.531	Acanthochromis_polyacanthus
ENSUMAG00000011788	DDB1	98	99.721	ENSAMEG00000016518	DDB1	94	99.721	Ailuropoda_melanoleuca
ENSUMAG00000011788	DDB1	89	91.837	ENSACIG00000020624	ddb1	99	91.837	Amphilophus_citrinellus
ENSUMAG00000011788	DDB1	98	91.349	ENSAOCG00000003066	ddb1	94	91.349	Amphiprion_ocellaris
ENSUMAG00000011788	DDB1	98	91.713	ENSAPEG00000000092	ddb1	99	91.713	Amphiprion_percula
ENSUMAG00000011788	DDB1	98	91.336	ENSATEG00000020571	ddb1	98	91.336	Anabas_testudineus
ENSUMAG00000011788	DDB1	96	96.601	ENSAPLG00000007174	DDB1	93	96.601	Anas_platyrhynchos
ENSUMAG00000011788	DDB1	98	96.837	ENSACAG00000017758	DDB1	94	96.837	Anolis_carolinensis
ENSUMAG00000011788	DDB1	98	99.628	ENSANAG00000021878	DDB1	94	99.628	Aotus_nancymaae
ENSUMAG00000011788	DDB1	98	91.721	ENSACLG00000012401	ddb1	99	90.604	Astatotilapia_calliptera
ENSUMAG00000011788	DDB1	98	99.535	ENSBTAG00000021569	DDB1	88	99.535	Bos_taurus
ENSUMAG00000011788	DDB1	98	37.568	WBGene00010890	ddb-1	94	37.477	Caenorhabditis_elegans
ENSUMAG00000011788	DDB1	98	99.628	ENSCJAG00000019319	DDB1	94	99.628	Callithrix_jacchus
ENSUMAG00000011788	DDB1	99	100.000	ENSCAFG00000016264	DDB1	100	100.000	Canis_familiaris
ENSUMAG00000011788	DDB1	99	100.000	ENSCAFG00020012722	DDB1	100	100.000	Canis_lupus_dingo
ENSUMAG00000011788	DDB1	98	99.535	ENSCHIG00000014969	DDB1	94	99.535	Capra_hircus
ENSUMAG00000011788	DDB1	98	98.884	ENSTSYG00000008027	DDB1	94	98.884	Carlito_syrichta
ENSUMAG00000011788	DDB1	96	98.956	ENSCAPG00000010786	DDB1	94	98.956	Cavia_aperea
ENSUMAG00000011788	DDB1	98	98.977	ENSCPOG00000009956	DDB1	94	98.977	Cavia_porcellus
ENSUMAG00000011788	DDB1	98	99.628	ENSCCAG00000035883	DDB1	94	99.628	Cebus_capucinus
ENSUMAG00000011788	DDB1	98	96.889	ENSCATG00000044495	DDB1	95	96.889	Cercocebus_atys
ENSUMAG00000011788	DDB1	98	99.070	ENSCLAG00000004126	DDB1	94	99.070	Chinchilla_lanigera
ENSUMAG00000011788	DDB1	98	99.628	ENSCSAG00000006392	DDB1	94	99.628	Chlorocebus_sabaeus
ENSUMAG00000011788	DDB1	87	91.633	ENSCHOG00000011377	DDB1	86	91.633	Choloepus_hoffmanni
ENSUMAG00000011788	DDB1	98	97.581	ENSCPBG00000017728	DDB1	94	97.581	Chrysemys_picta_bellii
ENSUMAG00000011788	DDB1	98	61.914	ENSCING00000007437	-	94	61.822	Ciona_intestinalis
ENSUMAG00000011788	DDB1	93	59.732	ENSCSAVG00000004783	-	100	60.048	Ciona_savignyi
ENSUMAG00000011788	DDB1	98	99.628	ENSCANG00000019948	DDB1	94	99.628	Colobus_angolensis_palliatus
ENSUMAG00000011788	DDB1	98	99.628	ENSCGRG00001016599	Ddb1	98	98.787	Cricetulus_griseus_chok1gshd
ENSUMAG00000011788	DDB1	98	99.628	ENSCGRG00000013427	Ddb1	94	99.628	Cricetulus_griseus_crigri
ENSUMAG00000011788	DDB1	97	91.235	ENSCSEG00000012499	ddb1	99	89.676	Cynoglossus_semilaevis
ENSUMAG00000011788	DDB1	98	91.620	ENSCVAG00000019531	ddb1	99	91.620	Cyprinodon_variegatus
ENSUMAG00000011788	DDB1	98	88.806	ENSDARG00000074431	ddb1	94	88.930	Danio_rerio
ENSUMAG00000011788	DDB1	100	98.007	ENSDNOG00000014884	DDB1	100	98.007	Dasypus_novemcinctus
ENSUMAG00000011788	DDB1	81	100.000	ENSDORG00000000127	Ddb1	93	100.000	Dipodomys_ordii
ENSUMAG00000011788	DDB1	98	61.688	FBgn0260962	pic	94	61.467	Drosophila_melanogaster
ENSUMAG00000011788	DDB1	67	100.000	ENSETEG00000001053	-	64	100.000	Echinops_telfairi
ENSUMAG00000011788	DDB1	81	85.039	ENSEBUG00000014593	ddb1	97	85.039	Eptatretus_burgeri
ENSUMAG00000011788	DDB1	98	99.535	ENSEASG00005008184	DDB1	94	99.535	Equus_asinus_asinus
ENSUMAG00000011788	DDB1	98	99.442	ENSECAG00000012136	DDB1	94	99.442	Equus_caballus
ENSUMAG00000011788	DDB1	88	97.643	ENSEEUG00000003194	DDB1	85	97.643	Erinaceus_europaeus
ENSUMAG00000011788	DDB1	98	91.535	ENSELUG00000023868	ddb1	94	91.535	Esox_lucius
ENSUMAG00000011788	DDB1	98	99.721	ENSFCAG00000029716	DDB1	94	99.721	Felis_catus
ENSUMAG00000011788	DDB1	98	97.214	ENSFALG00000011981	DDB1	94	97.214	Ficedula_albicollis
ENSUMAG00000011788	DDB1	98	98.977	ENSFDAG00000005128	DDB1	94	98.977	Fukomys_damarensis
ENSUMAG00000011788	DDB1	87	95.109	ENSFHEG00000022133	ddb1	92	95.109	Fundulus_heteroclitus
ENSUMAG00000011788	DDB1	82	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSUMAG00000011788	DDB1	98	96.930	ENSGALG00000042333	DDB1	94	96.930	Gallus_gallus
ENSUMAG00000011788	DDB1	98	91.434	ENSGAFG00000013142	ddb1	99	91.434	Gambusia_affinis
ENSUMAG00000011788	DDB1	97	91.589	ENSGACG00000017182	ddb1	98	91.589	Gasterosteus_aculeatus
ENSUMAG00000011788	DDB1	93	97.645	ENSGAGG00000014124	DDB1	94	97.645	Gopherus_agassizii
ENSUMAG00000011788	DDB1	98	99.628	ENSGGOG00000004052	DDB1	94	99.628	Gorilla_gorilla
ENSUMAG00000011788	DDB1	98	91.721	ENSHBUG00000008873	ddb1	94	91.721	Haplochromis_burtoni
ENSUMAG00000011788	DDB1	98	98.884	ENSHGLG00000018430	DDB1	94	98.884	Heterocephalus_glaber_female
ENSUMAG00000011788	DDB1	98	97.767	ENSHGLG00100014475	DDB1	94	97.767	Heterocephalus_glaber_male
ENSUMAG00000011788	DDB1	98	91.341	ENSHCOG00000018670	ddb1	98	91.341	Hippocampus_comes
ENSUMAG00000011788	DDB1	98	90.901	ENSIPUG00000005612	DDB1	98	90.901	Ictalurus_punctatus
ENSUMAG00000011788	DDB1	98	99.628	ENSSTOG00000007552	DDB1	94	99.628	Ictidomys_tridecemlineatus
ENSUMAG00000011788	DDB1	98	99.535	ENSJJAG00000017769	Ddb1	94	99.535	Jaculus_jaculus
ENSUMAG00000011788	DDB1	98	91.527	ENSKMAG00000002315	ddb1	99	91.527	Kryptolebias_marmoratus
ENSUMAG00000011788	DDB1	88	91.503	ENSLBEG00000017065	ddb1	99	91.503	Labrus_bergylta
ENSUMAG00000011788	DDB1	98	93.756	ENSLACG00000017611	DDB1	97	93.661	Latimeria_chalumnae
ENSUMAG00000011788	DDB1	90	83.333	ENSLOCG00000000012	ddb1	94	83.333	Lepisosteus_oculatus
ENSUMAG00000011788	DDB1	98	99.442	ENSLAFG00000011513	DDB1	94	99.442	Loxodonta_africana
ENSUMAG00000011788	DDB1	98	99.628	ENSMFAG00000042035	DDB1	94	99.628	Macaca_fascicularis
ENSUMAG00000011788	DDB1	98	99.628	ENSMMUG00000002691	DDB1	95	99.628	Macaca_mulatta
ENSUMAG00000011788	DDB1	98	99.628	ENSMNEG00000031559	DDB1	94	99.628	Macaca_nemestrina
ENSUMAG00000011788	DDB1	98	99.628	ENSMLEG00000044136	DDB1	98	98.165	Mandrillus_leucophaeus
ENSUMAG00000011788	DDB1	98	91.721	ENSMAMG00000014372	ddb1	94	91.721	Mastacembelus_armatus
ENSUMAG00000011788	DDB1	98	91.628	ENSMZEG00005013835	ddb1	94	91.628	Maylandia_zebra
ENSUMAG00000011788	DDB1	92	96.627	ENSMGAG00000004990	DDB1	94	96.627	Meleagris_gallopavo
ENSUMAG00000011788	DDB1	98	99.628	ENSMAUG00000012926	Ddb1	94	99.628	Mesocricetus_auratus
ENSUMAG00000011788	DDB1	98	99.628	ENSMICG00000013703	DDB1	94	99.628	Microcebus_murinus
ENSUMAG00000011788	DDB1	98	99.349	ENSMOCG00000020499	Ddb1	94	99.349	Microtus_ochrogaster
ENSUMAG00000011788	DDB1	89	91.837	ENSMMOG00000001758	ddb1	99	91.837	Mola_mola
ENSUMAG00000011788	DDB1	98	89.786	ENSMODG00000020353	DDB1	93	89.786	Monodelphis_domestica
ENSUMAG00000011788	DDB1	98	91.721	ENSMALG00000014071	ddb1	94	91.721	Monopterus_albus
ENSUMAG00000011788	DDB1	98	99.535	MGP_CAROLIEiJ_G0022695	Ddb1	94	99.535	Mus_caroli
ENSUMAG00000011788	DDB1	98	99.442	ENSMUSG00000024740	Ddb1	94	99.442	Mus_musculus
ENSUMAG00000011788	DDB1	98	99.535	MGP_PahariEiJ_G0014189	Ddb1	94	99.535	Mus_pahari
ENSUMAG00000011788	DDB1	98	99.535	MGP_SPRETEiJ_G0023609	Ddb1	94	99.535	Mus_spretus
ENSUMAG00000011788	DDB1	98	96.372	ENSMPUG00000014200	DDB1	94	96.372	Mustela_putorius_furo
ENSUMAG00000011788	DDB1	98	99.070	ENSMLUG00000013232	DDB1	94	99.070	Myotis_lucifugus
ENSUMAG00000011788	DDB1	98	99.163	ENSNGAG00000009384	Ddb1	94	99.163	Nannospalax_galili
ENSUMAG00000011788	DDB1	98	91.814	ENSNBRG00000019581	ddb1	94	91.814	Neolamprologus_brichardi
ENSUMAG00000011788	DDB1	98	96.249	ENSNLEG00000002022	DDB1	95	96.249	Nomascus_leucogenys
ENSUMAG00000011788	DDB1	89	98.174	ENSMEUG00000001099	DDB1	87	98.174	Notamacropus_eugenii
ENSUMAG00000011788	DDB1	88	90.166	ENSOPRG00000008254	DDB1	85	90.166	Ochotona_princeps
ENSUMAG00000011788	DDB1	98	98.884	ENSODEG00000002419	DDB1	94	98.884	Octodon_degus
ENSUMAG00000011788	DDB1	98	91.721	ENSONIG00000005804	ddb1	94	91.721	Oreochromis_niloticus
ENSUMAG00000011788	DDB1	88	98.035	ENSOANG00000004897	DDB1	94	98.035	Ornithorhynchus_anatinus
ENSUMAG00000011788	DDB1	98	99.721	ENSOCUG00000001667	DDB1	94	99.721	Oryctolagus_cuniculus
ENSUMAG00000011788	DDB1	98	91.256	ENSORLG00000001399	ddb1	98	91.162	Oryzias_latipes
ENSUMAG00000011788	DDB1	98	91.163	ENSORLG00020001277	ddb1	96	91.163	Oryzias_latipes_hni
ENSUMAG00000011788	DDB1	98	91.256	ENSORLG00015002080	ddb1	99	91.256	Oryzias_latipes_hsok
ENSUMAG00000011788	DDB1	98	91.713	ENSOMEG00000006181	ddb1	97	91.713	Oryzias_melastigma
ENSUMAG00000011788	DDB1	98	99.442	ENSOGAG00000016103	DDB1	94	99.442	Otolemur_garnettii
ENSUMAG00000011788	DDB1	98	99.535	ENSOARG00000011716	DDB1	93	99.535	Ovis_aries
ENSUMAG00000011788	DDB1	98	99.628	ENSPPAG00000035343	DDB1	94	99.628	Pan_paniscus
ENSUMAG00000011788	DDB1	98	99.721	ENSPPRG00000013300	DDB1	94	99.721	Panthera_pardus
ENSUMAG00000011788	DDB1	96	99.715	ENSPTIG00000006909	DDB1	92	99.715	Panthera_tigris_altaica
ENSUMAG00000011788	DDB1	98	99.628	ENSPTRG00000003737	DDB1	94	99.628	Pan_troglodytes
ENSUMAG00000011788	DDB1	98	99.628	ENSPANG00000000242	DDB1	94	99.628	Papio_anubis
ENSUMAG00000011788	DDB1	99	90.476	ENSPKIG00000019213	ddb1	96	90.476	Paramormyrops_kingsleyae
ENSUMAG00000011788	DDB1	96	96.884	ENSPSIG00000013275	DDB1	94	96.884	Pelodiscus_sinensis
ENSUMAG00000011788	DDB1	89	91.531	ENSPMGG00000021179	ddb1	99	91.531	Periophthalmus_magnuspinnatus
ENSUMAG00000011788	DDB1	98	99.628	ENSPEMG00000012241	Ddb1	94	99.628	Peromyscus_maniculatus_bairdii
ENSUMAG00000011788	DDB1	93	86.837	ENSPMAG00000008479	ddb1	100	86.837	Petromyzon_marinus
ENSUMAG00000011788	DDB1	98	98.698	ENSPCIG00000002643	DDB1	94	98.698	Phascolarctos_cinereus
ENSUMAG00000011788	DDB1	98	91.597	ENSPFOG00000002768	ddb1	94	91.597	Poecilia_formosa
ENSUMAG00000011788	DDB1	98	91.628	ENSPLAG00000017227	ddb1	98	91.628	Poecilia_latipinna
ENSUMAG00000011788	DDB1	98	91.628	ENSPMEG00000011398	ddb1	98	91.628	Poecilia_mexicana
ENSUMAG00000011788	DDB1	98	91.628	ENSPREG00000004440	ddb1	98	91.628	Poecilia_reticulata
ENSUMAG00000011788	DDB1	98	94.708	ENSPPYG00000003193	DDB1	94	94.708	Pongo_abelii
ENSUMAG00000011788	DDB1	82	99.008	ENSPCAG00000011040	DDB1	79	99.008	Procavia_capensis
ENSUMAG00000011788	DDB1	98	98.794	ENSPCOG00000015176	DDB1	94	98.794	Propithecus_coquereli
ENSUMAG00000011788	DDB1	98	99.535	ENSPVAG00000003847	DDB1	94	99.535	Pteropus_vampyrus
ENSUMAG00000011788	DDB1	98	91.527	ENSPNAG00000006635	ddb1	97	91.527	Pygocentrus_nattereri
ENSUMAG00000011788	DDB1	98	99.535	ENSRNOG00000020715	Ddb1	94	99.535	Rattus_norvegicus
ENSUMAG00000011788	DDB1	98	99.628	ENSRBIG00000033611	DDB1	95	99.628	Rhinopithecus_bieti
ENSUMAG00000011788	DDB1	98	99.628	ENSRROG00000041407	DDB1	94	99.628	Rhinopithecus_roxellana
ENSUMAG00000011788	DDB1	98	99.535	ENSSBOG00000019775	DDB1	94	99.535	Saimiri_boliviensis_boliviensis
ENSUMAG00000011788	DDB1	92	96.517	ENSSHAG00000011600	DDB1	94	96.517	Sarcophilus_harrisii
ENSUMAG00000011788	DDB1	98	91.814	ENSSFOG00015011151	ddb1	97	91.814	Scleropages_formosus
ENSUMAG00000011788	DDB1	98	91.256	ENSSMAG00000009495	ddb1	94	91.256	Scophthalmus_maximus
ENSUMAG00000011788	DDB1	98	91.628	ENSSDUG00000004642	ddb1	94	91.628	Seriola_dumerili
ENSUMAG00000011788	DDB1	98	91.628	ENSSLDG00000015804	ddb1	94	91.628	Seriola_lalandi_dorsalis
ENSUMAG00000011788	DDB1	70	100.000	ENSSARG00000003290	-	71	100.000	Sorex_araneus
ENSUMAG00000011788	DDB1	98	97.767	ENSSPUG00000019338	DDB1	94	97.767	Sphenodon_punctatus
ENSUMAG00000011788	DDB1	98	91.907	ENSSPAG00000009888	ddb1	99	91.907	Stegastes_partitus
ENSUMAG00000011788	DDB1	98	98.520	ENSSSCG00000013094	DDB1	95	98.520	Sus_scrofa
ENSUMAG00000011788	DDB1	97	97.749	ENSTGUG00000006414	DDB1	94	97.749	Taeniopygia_guttata
ENSUMAG00000011788	DDB1	98	90.503	ENSTRUG00000016682	ddb1	99	90.503	Takifugu_rubripes
ENSUMAG00000011788	DDB1	85	84.952	ENSTNIG00000009565	ddb1	93	84.952	Tetraodon_nigroviridis
ENSUMAG00000011788	DDB1	90	94.160	ENSTTRG00000011055	DDB1	88	94.160	Tursiops_truncatus
ENSUMAG00000011788	DDB1	100	100.000	ENSUAMG00000017793	DDB1	95	100.000	Ursus_americanus
ENSUMAG00000011788	DDB1	87	95.233	ENSVPAG00000007963	DDB1	86	95.233	Vicugna_pacos
ENSUMAG00000011788	DDB1	98	99.628	ENSVVUG00000004987	DDB1	94	99.628	Vulpes_vulpes
ENSUMAG00000011788	DDB1	98	92.956	ENSXETG00000008820	ddb1	94	92.956	Xenopus_tropicalis
ENSUMAG00000011788	DDB1	89	91.327	ENSXCOG00000013956	ddb1	99	91.327	Xiphophorus_couchianus
ENSUMAG00000011788	DDB1	98	91.434	ENSXMAG00000000022	ddb1	99	91.434	Xiphophorus_maculatus