EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000011865 (Gene tree)
Gene ID: 103678619
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 30950 bases
Position: chrKK498754.1:2375646-2406595
Accession: 103678619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000016819	MIF4G_like	PF09088.11	7e-37	1	1
ENSUMAP00000016829	MIF4G_like	PF09088.11	7e-37	1	1
ENSUMAP00000016867	MIF4G_like	PF09088.11	9.4e-30	1	1
ENSUMAP00000016858	MIF4G_like	PF09088.11	9.8e-30	1	1
ENSUMAP00000016845	MIF4G_like	PF09088.11	5.5e-17	1	1
ENSUMAP00000016864	MIF4G_like	PF09088.11	5.5e-12	1	1
ENSUMAP00000016864	MIF4G_like_2	PF09090.11	9.9e-86	1	1
ENSUMAP00000016845	MIF4G_like_2	PF09090.11	1e-85	1	1
ENSUMAP00000016867	MIF4G_like_2	PF09090.11	1.5e-85	1	1
ENSUMAP00000016858	MIF4G_like_2	PF09090.11	1.7e-85	1	1
ENSUMAP00000016819	MIF4G_like_2	PF09090.11	2.1e-85	1	1
ENSUMAP00000016829	MIF4G_like_2	PF09090.11	2.1e-85	1	1
ENSUMAP00000016845	MIF4G	PF02854.19	3.6e-31	1	1
ENSUMAP00000016864	MIF4G	PF02854.19	4.3e-31	1	1
ENSUMAP00000016858	MIF4G	PF02854.19	4.6e-31	1	1
ENSUMAP00000016867	MIF4G	PF02854.19	3.5e-24	1	1
ENSUMAP00000016819	MIF4G	PF02854.19	1.9e-16	1	1
ENSUMAP00000016829	MIF4G	PF02854.19	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000019898	NCBP1-202	2731	-	ENSUMAP00000016829	683 (aa)	-	UPI000B503BE8
ENSUMAT00000019888	NCBP1-201	2832	XM_008708011	ENSUMAP00000016819	683 (aa)	XP_008706233	UPI000B503BE8
ENSUMAT00000019914	NCBP1-203	2295	-	ENSUMAP00000016845	764 (aa)	-	-
ENSUMAT00000019937	NCBP1-206	2178	-	ENSUMAP00000016867	725 (aa)	-	-
ENSUMAT00000019934	NCBP1-205	2247	-	ENSUMAP00000016864	748 (aa)	-	-
ENSUMAT00000019927	NCBP1-204	2295	-	ENSUMAP00000016858	764 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000011865's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03013	RNA transport	KEGG
umr03015	mRNA surveillance pathway	KEGG
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000011865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000011865	NCBP1	100	99.561	ENSG00000136937	NCBP1	97	97.139	Homo_sapiens
ENSUMAG00000011865	NCBP1	99	83.261	ENSAPOG00000008002	NCBP1	97	80.829	Acanthochromis_polyacanthus
ENSUMAG00000011865	NCBP1	100	99.854	ENSAMEG00000004763	NCBP1	97	97.399	Ailuropoda_melanoleuca
ENSUMAG00000011865	NCBP1	99	83.673	ENSACIG00000000274	NCBP1	97	81.218	Amphilophus_citrinellus
ENSUMAG00000011865	NCBP1	99	83.406	ENSAOCG00000021148	NCBP1	97	81.242	Amphiprion_ocellaris
ENSUMAG00000011865	NCBP1	99	83.406	ENSAPEG00000001701	NCBP1	97	81.242	Amphiprion_percula
ENSUMAG00000011865	NCBP1	99	82.824	ENSATEG00000006929	NCBP1	97	80.724	Anabas_testudineus
ENSUMAG00000011865	NCBP1	100	90.435	ENSAPLG00000016318	NCBP1	100	88.507	Anas_platyrhynchos
ENSUMAG00000011865	NCBP1	100	87.464	ENSACAG00000004409	NCBP1	85	85.128	Anolis_carolinensis
ENSUMAG00000011865	NCBP1	100	99.707	ENSANAG00000025744	NCBP1	100	96.966	Aotus_nancymaae
ENSUMAG00000011865	NCBP1	99	82.551	ENSACLG00000014812	NCBP1	99	80.726	Astatotilapia_calliptera
ENSUMAG00000011865	NCBP1	99	81.277	ENSAMXG00000016364	NCBP1	97	78.968	Astyanax_mexicanus
ENSUMAG00000011865	NCBP1	100	99.414	ENSBTAG00000009732	NCBP1	97	97.009	Bos_taurus
ENSUMAG00000011865	NCBP1	99	33.716	WBGene00018156	ncbp-1	97	32.484	Caenorhabditis_elegans
ENSUMAG00000011865	NCBP1	100	99.561	ENSCJAG00000010840	NCBP1	100	96.828	Callithrix_jacchus
ENSUMAG00000011865	NCBP1	100	100.000	ENSCAFG00000002445	NCBP1	97	97.529	Canis_familiaris
ENSUMAG00000011865	NCBP1	100	100.000	ENSCAFG00020017997	NCBP1	100	100.000	Canis_lupus_dingo
ENSUMAG00000011865	NCBP1	100	99.122	ENSCHIG00000020139	NCBP1	97	96.749	Capra_hircus
ENSUMAG00000011865	NCBP1	52	98.731	ENSTSYG00000011914	NCBP1	96	99.677	Carlito_syrichta
ENSUMAG00000011865	NCBP1	89	88.816	ENSCAPG00000014252	NCBP1	90	89.623	Cavia_aperea
ENSUMAG00000011865	NCBP1	100	99.414	ENSCPOG00000012573	NCBP1	99	95.550	Cavia_porcellus
ENSUMAG00000011865	NCBP1	100	99.707	ENSCCAG00000032297	NCBP1	97	97.269	Cebus_capucinus
ENSUMAG00000011865	NCBP1	100	99.561	ENSCATG00000010052	NCBP1	97	99.561	Cercocebus_atys
ENSUMAG00000011865	NCBP1	100	99.707	ENSCLAG00000014339	NCBP1	97	97.139	Chinchilla_lanigera
ENSUMAG00000011865	NCBP1	100	99.561	ENSCSAG00000010929	NCBP1	97	97.139	Chlorocebus_sabaeus
ENSUMAG00000011865	NCBP1	90	97.458	ENSCHOG00000010332	NCBP1	87	97.143	Choloepus_hoffmanni
ENSUMAG00000011865	NCBP1	100	90.262	ENSCPBG00000024344	NCBP1	100	87.671	Chrysemys_picta_bellii
ENSUMAG00000011865	NCBP1	99	52.926	ENSCING00000008990	-	97	52.264	Ciona_intestinalis
ENSUMAG00000011865	NCBP1	99	51.871	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSUMAG00000011865	NCBP1	100	99.561	ENSCANG00000036913	NCBP1	100	96.690	Colobus_angolensis_palliatus
ENSUMAG00000011865	NCBP1	100	98.389	ENSCGRG00001015771	Ncbp1	97	96.099	Cricetulus_griseus_chok1gshd
ENSUMAG00000011865	NCBP1	100	98.389	ENSCGRG00000010311	Ncbp1	99	96.099	Cricetulus_griseus_crigri
ENSUMAG00000011865	NCBP1	99	82.845	ENSCSEG00000012377	NCBP1	99	81.259	Cynoglossus_semilaevis
ENSUMAG00000011865	NCBP1	99	80.233	ENSCVAG00000008795	NCBP1	97	79.457	Cyprinodon_variegatus
ENSUMAG00000011865	NCBP1	100	98.243	ENSDNOG00000006885	NCBP1	100	98.243	Dasypus_novemcinctus
ENSUMAG00000011865	NCBP1	100	98.389	ENSDORG00000013652	Ncbp1	97	91.591	Dipodomys_ordii
ENSUMAG00000011865	NCBP1	100	56.691	FBgn0022942	Cbp80	97	56.572	Drosophila_melanogaster
ENSUMAG00000011865	NCBP1	81	35.192	FBgn0038887	CG7907	84	32.827	Drosophila_melanogaster
ENSUMAG00000011865	NCBP1	87	94.105	ENSETEG00000009705	NCBP1	86	89.956	Echinops_telfairi
ENSUMAG00000011865	NCBP1	100	73.469	ENSEBUG00000008386	NCBP1	97	71.762	Eptatretus_burgeri
ENSUMAG00000011865	NCBP1	100	99.414	ENSEASG00005022795	NCBP1	97	97.009	Equus_asinus_asinus
ENSUMAG00000011865	NCBP1	100	99.561	ENSECAG00000013847	NCBP1	97	97.139	Equus_caballus
ENSUMAG00000011865	NCBP1	95	93.673	ENSEEUG00000015973	NCBP1	96	93.260	Erinaceus_europaeus
ENSUMAG00000011865	NCBP1	99	80.378	ENSELUG00000022519	NCBP1	98	80.265	Esox_lucius
ENSUMAG00000011865	NCBP1	100	99.854	ENSFCAG00000001206	NCBP1	97	97.399	Felis_catus
ENSUMAG00000011865	NCBP1	100	89.725	ENSFALG00000001193	NCBP1	99	87.387	Ficedula_albicollis
ENSUMAG00000011865	NCBP1	100	99.414	ENSFDAG00000010864	NCBP1	98	96.879	Fukomys_damarensis
ENSUMAG00000011865	NCBP1	99	81.977	ENSFHEG00000000655	NCBP1	97	79.716	Fundulus_heteroclitus
ENSUMAG00000011865	NCBP1	99	79.215	ENSGMOG00000008653	NCBP1	96	77.649	Gadus_morhua
ENSUMAG00000011865	NCBP1	100	91.082	ENSGALG00000002087	NCBP1	97	88.571	Gallus_gallus
ENSUMAG00000011865	NCBP1	99	82.551	ENSGAFG00000017787	NCBP1	97	80.599	Gambusia_affinis
ENSUMAG00000011865	NCBP1	99	82.003	ENSGACG00000016772	NCBP1	96	80.000	Gasterosteus_aculeatus
ENSUMAG00000011865	NCBP1	100	89.971	ENSGAGG00000019483	NCBP1	100	87.534	Gopherus_agassizii
ENSUMAG00000011865	NCBP1	100	99.561	ENSGGOG00000001376	NCBP1	100	96.828	Gorilla_gorilla
ENSUMAG00000011865	NCBP1	99	82.387	ENSHBUG00000020843	NCBP1	97	80.466	Haplochromis_burtoni
ENSUMAG00000011865	NCBP1	100	85.547	ENSHGLG00000018112	-	97	84.176	Heterocephalus_glaber_female
ENSUMAG00000011865	NCBP1	100	99.561	ENSHGLG00000001882	NCBP1	97	97.009	Heterocephalus_glaber_female
ENSUMAG00000011865	NCBP1	100	85.547	ENSHGLG00100017373	-	97	83.917	Heterocephalus_glaber_male
ENSUMAG00000011865	NCBP1	100	99.561	ENSHGLG00100013014	NCBP1	97	97.009	Heterocephalus_glaber_male
ENSUMAG00000011865	NCBP1	91	72.540	ENSHCOG00000000204	NCBP1	92	72.381	Hippocampus_comes
ENSUMAG00000011865	NCBP1	99	81.831	ENSIPUG00000007275	ncbp1	97	79.587	Ictalurus_punctatus
ENSUMAG00000011865	NCBP1	100	99.414	ENSSTOG00000002695	NCBP1	97	97.009	Ictidomys_tridecemlineatus
ENSUMAG00000011865	NCBP1	99	81.805	ENSKMAG00000003594	NCBP1	95	83.191	Kryptolebias_marmoratus
ENSUMAG00000011865	NCBP1	99	80.516	ENSLBEG00000011661	NCBP1	97	78.571	Labrus_bergylta
ENSUMAG00000011865	NCBP1	100	80.719	ENSLACG00000013955	NCBP1	97	78.617	Latimeria_chalumnae
ENSUMAG00000011865	NCBP1	99	70.072	ENSLOCG00000009579	NCBP1	97	69.910	Lepisosteus_oculatus
ENSUMAG00000011865	NCBP1	100	98.829	ENSLAFG00000005999	NCBP1	97	96.489	Loxodonta_africana
ENSUMAG00000011865	NCBP1	100	99.561	ENSMFAG00000030994	NCBP1	97	99.561	Macaca_fascicularis
ENSUMAG00000011865	NCBP1	100	99.561	ENSMMUG00000012281	NCBP1	97	99.561	Macaca_mulatta
ENSUMAG00000011865	NCBP1	100	99.561	ENSMNEG00000042790	NCBP1	97	97.139	Macaca_nemestrina
ENSUMAG00000011865	NCBP1	100	99.561	ENSMLEG00000030374	NCBP1	100	96.828	Mandrillus_leucophaeus
ENSUMAG00000011865	NCBP1	99	83.115	ENSMAMG00000014806	NCBP1	98	80.983	Mastacembelus_armatus
ENSUMAG00000011865	NCBP1	99	82.387	ENSMZEG00005003469	NCBP1	97	80.466	Maylandia_zebra
ENSUMAG00000011865	NCBP1	99	82.258	ENSMZEG00005009290	-	99	80.603	Maylandia_zebra
ENSUMAG00000011865	NCBP1	100	98.243	ENSMAUG00000020583	Ncbp1	97	96.204	Mesocricetus_auratus
ENSUMAG00000011865	NCBP1	100	99.122	ENSMICG00000012682	NCBP1	97	96.749	Microcebus_murinus
ENSUMAG00000011865	NCBP1	100	98.097	ENSMOCG00000015818	Ncbp1	97	95.709	Microtus_ochrogaster
ENSUMAG00000011865	NCBP1	99	81.965	ENSMMOG00000002610	NCBP1	99	80.140	Mola_mola
ENSUMAG00000011865	NCBP1	100	95.461	ENSMODG00000003202	NCBP1	96	92.016	Monodelphis_domestica
ENSUMAG00000011865	NCBP1	99	82.096	ENSMALG00000003547	NCBP1	97	80.207	Monopterus_albus
ENSUMAG00000011865	NCBP1	100	97.950	MGP_CAROLIEiJ_G0025982	Ncbp1	97	95.709	Mus_caroli
ENSUMAG00000011865	NCBP1	100	97.950	ENSMUSG00000028330	Ncbp1	97	95.709	Mus_musculus
ENSUMAG00000011865	NCBP1	100	98.243	MGP_PahariEiJ_G0028318	Ncbp1	97	95.969	Mus_pahari
ENSUMAG00000011865	NCBP1	100	97.950	MGP_SPRETEiJ_G0026945	Ncbp1	97	95.709	Mus_spretus
ENSUMAG00000011865	NCBP1	100	99.854	ENSMPUG00000006399	NCBP1	97	97.399	Mustela_putorius_furo
ENSUMAG00000011865	NCBP1	100	98.389	ENSMLUG00000015201	NCBP1	99	95.969	Myotis_lucifugus
ENSUMAG00000011865	NCBP1	100	98.243	ENSNGAG00000014101	Ncbp1	98	95.969	Nannospalax_galili
ENSUMAG00000011865	NCBP1	75	87.437	ENSNBRG00000014674	NCBP1	92	87.437	Neolamprologus_brichardi
ENSUMAG00000011865	NCBP1	100	99.561	ENSNLEG00000016909	NCBP1	100	96.828	Nomascus_leucogenys
ENSUMAG00000011865	NCBP1	90	95.045	ENSMEUG00000010672	NCBP1	89	92.793	Notamacropus_eugenii
ENSUMAG00000011865	NCBP1	82	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSUMAG00000011865	NCBP1	100	99.414	ENSODEG00000003232	NCBP1	98	96.879	Octodon_degus
ENSUMAG00000011865	NCBP1	99	82.242	ENSONIG00000001502	NCBP1	97	80.595	Oreochromis_niloticus
ENSUMAG00000011865	NCBP1	77	96.774	ENSOANG00000001918	NCBP1	98	92.496	Ornithorhynchus_anatinus
ENSUMAG00000011865	NCBP1	98	98.954	ENSOCUG00000013853	NCBP1	94	96.424	Oryctolagus_cuniculus
ENSUMAG00000011865	NCBP1	99	80.897	ENSORLG00000011008	NCBP1	98	79.383	Oryzias_latipes
ENSUMAG00000011865	NCBP1	99	80.897	ENSORLG00020017455	NCBP1	97	79.151	Oryzias_latipes_hni
ENSUMAG00000011865	NCBP1	99	81.042	ENSORLG00015012127	NCBP1	97	79.279	Oryzias_latipes_hsok
ENSUMAG00000011865	NCBP1	99	81.331	ENSOMEG00000020698	NCBP1	97	79.923	Oryzias_melastigma
ENSUMAG00000011865	NCBP1	100	99.854	ENSOGAG00000013888	NCBP1	97	97.399	Otolemur_garnettii
ENSUMAG00000011865	NCBP1	100	99.122	ENSOARG00000011233	NCBP1	97	96.749	Ovis_aries
ENSUMAG00000011865	NCBP1	100	99.561	ENSPPAG00000026462	NCBP1	100	96.828	Pan_paniscus
ENSUMAG00000011865	NCBP1	100	100.000	ENSPPRG00000022574	NCBP1	97	97.529	Panthera_pardus
ENSUMAG00000011865	NCBP1	100	100.000	ENSPTIG00000018507	NCBP1	97	97.529	Panthera_tigris_altaica
ENSUMAG00000011865	NCBP1	100	99.561	ENSPTRG00000021167	NCBP1	97	97.139	Pan_troglodytes
ENSUMAG00000011865	NCBP1	100	99.561	ENSPANG00000025591	NCBP1	100	96.828	Papio_anubis
ENSUMAG00000011865	NCBP1	100	80.523	ENSPKIG00000015861	NCBP1	99	79.178	Paramormyrops_kingsleyae
ENSUMAG00000011865	NCBP1	74	89.453	ENSPSIG00000009558	NCBP1	100	89.648	Pelodiscus_sinensis
ENSUMAG00000011865	NCBP1	99	78.894	ENSPMGG00000020476	NCBP1	97	77.102	Periophthalmus_magnuspinnatus
ENSUMAG00000011865	NCBP1	100	98.097	ENSPEMG00000020105	Ncbp1	97	95.709	Peromyscus_maniculatus_bairdii
ENSUMAG00000011865	NCBP1	100	66.839	ENSPMAG00000005533	NCBP1	96	66.839	Petromyzon_marinus
ENSUMAG00000011865	NCBP1	100	95.168	ENSPCIG00000015800	NCBP1	96	91.754	Phascolarctos_cinereus
ENSUMAG00000011865	NCBP1	99	81.621	ENSPFOG00000004158	NCBP1	97	79.537	Poecilia_formosa
ENSUMAG00000011865	NCBP1	99	82.122	ENSPLAG00000020002	NCBP1	97	79.974	Poecilia_latipinna
ENSUMAG00000011865	NCBP1	99	82.122	ENSPMEG00000019821	NCBP1	97	79.974	Poecilia_mexicana
ENSUMAG00000011865	NCBP1	99	82.003	ENSPREG00000006035	NCBP1	97	79.871	Poecilia_reticulata
ENSUMAG00000011865	NCBP1	100	99.561	ENSPPYG00000019426	NCBP1	97	97.139	Pongo_abelii
ENSUMAG00000011865	NCBP1	88	98.661	ENSPCAG00000009943	NCBP1	85	98.966	Procavia_capensis
ENSUMAG00000011865	NCBP1	90	99.593	ENSPCOG00000020024	NCBP1	98	98.684	Propithecus_coquereli
ENSUMAG00000011865	NCBP1	100	99.268	ENSPVAG00000005924	NCBP1	97	96.879	Pteropus_vampyrus
ENSUMAG00000011865	NCBP1	99	82.551	ENSPNYG00000002140	NCBP1	99	80.726	Pundamilia_nyererei
ENSUMAG00000011865	NCBP1	99	82.362	ENSPNAG00000027753	NCBP1	99	79.391	Pygocentrus_nattereri
ENSUMAG00000011865	NCBP1	100	98.097	ENSRNOG00000023605	Ncbp1	97	95.839	Rattus_norvegicus
ENSUMAG00000011865	NCBP1	100	99.561	ENSRBIG00000043175	NCBP1	97	99.561	Rhinopithecus_bieti
ENSUMAG00000011865	NCBP1	100	99.561	ENSRROG00000029767	NCBP1	100	96.828	Rhinopithecus_roxellana
ENSUMAG00000011865	NCBP1	100	99.707	ENSSBOG00000019378	NCBP1	100	96.552	Saimiri_boliviensis_boliviensis
ENSUMAG00000011865	NCBP1	70	95.720	ENSSHAG00000015882	NCBP1	70	95.720	Sarcophilus_harrisii
ENSUMAG00000011865	NCBP1	100	80.966	ENSSFOG00015001872	NCBP1	98	79.557	Scleropages_formosus
ENSUMAG00000011865	NCBP1	99	81.514	ENSSMAG00000007463	NCBP1	97	79.690	Scophthalmus_maximus
ENSUMAG00000011865	NCBP1	99	82.991	ENSSDUG00000007019	NCBP1	97	81.250	Seriola_dumerili
ENSUMAG00000011865	NCBP1	99	82.678	ENSSLDG00000021924	NCBP1	97	80.595	Seriola_lalandi_dorsalis
ENSUMAG00000011865	NCBP1	82	98.000	ENSSARG00000007274	NCBP1	85	86.681	Sorex_araneus
ENSUMAG00000011865	NCBP1	100	81.259	ENSSPUG00000008609	NCBP1	97	79.714	Sphenodon_punctatus
ENSUMAG00000011865	NCBP1	99	83.261	ENSSPAG00000012550	NCBP1	97	81.113	Stegastes_partitus
ENSUMAG00000011865	NCBP1	100	99.707	ENSSSCG00000005366	NCBP1	97	97.269	Sus_scrofa
ENSUMAG00000011865	NCBP1	100	83.576	ENSTGUG00000001472	NCBP1	97	81.912	Taeniopygia_guttata
ENSUMAG00000011865	NCBP1	99	81.659	ENSTRUG00000005287	NCBP1	97	79.560	Takifugu_rubripes
ENSUMAG00000011865	NCBP1	100	95.315	ENSTBEG00000004035	NCBP1	97	93.368	Tupaia_belangeri
ENSUMAG00000011865	NCBP1	87	100.000	ENSTTRG00000000507	NCBP1	85	100.000	Tursiops_truncatus
ENSUMAG00000011865	NCBP1	100	99.854	ENSUAMG00000005471	NCBP1	97	97.399	Ursus_americanus
ENSUMAG00000011865	NCBP1	100	99.854	ENSVPAG00000010537	NCBP1	97	92.978	Vicugna_pacos
ENSUMAG00000011865	NCBP1	100	100.000	ENSVVUG00000019725	NCBP1	97	97.529	Vulpes_vulpes
ENSUMAG00000011865	NCBP1	100	80.702	ENSXETG00000010179	ncbp1	97	79.221	Xenopus_tropicalis
ENSUMAG00000011865	NCBP1	99	82.267	ENSXMAG00000018253	NCBP1	97	80.103	Xiphophorus_maculatus