EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000012237 (Gene tree)
Gene ID: 103676247
Gene Symbol: RBM17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 19073 bases
Position: chrKK498709.1:1995448-2014520
Accession: 103676247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000016659	RRM_1	PF00076.22	7e-05	1	1
ENSUMAP00000016656	RRM_1	PF00076.22	7.7e-05	1	1
ENSUMAP00000016659	G-patch	PF01585.23	5.6e-13	1	1
ENSUMAP00000016656	G-patch	PF01585.23	6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000019702	RBM17-201	1647	XM_008705410	ENSUMAP00000016656	401 (aa)	XP_008703632	UPI0004DFEE6B
ENSUMAT00000019705	RBM17-202	1590	-	ENSUMAP00000016659	382 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000012237's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000012237's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000012237	RBM17	100	99.002	ENSG00000134453	RBM17	100	99.057	Homo_sapiens
ENSUMAG00000012237	RBM17	99	82.921	ENSAPOG00000007101	rbm17	99	83.127	Acanthochromis_polyacanthus
ENSUMAG00000012237	RBM17	100	99.751	ENSAMEG00000002107	RBM17	100	99.751	Ailuropoda_melanoleuca
ENSUMAG00000012237	RBM17	100	79.412	ENSACIG00000006251	rbm17	100	79.412	Amphilophus_citrinellus
ENSUMAG00000012237	RBM17	100	83.047	ENSAOCG00000014892	rbm17	100	83.047	Amphiprion_ocellaris
ENSUMAG00000012237	RBM17	100	83.047	ENSAPEG00000022779	rbm17	100	83.047	Amphiprion_percula
ENSUMAG00000012237	RBM17	100	79.009	ENSATEG00000004406	rbm17	100	79.009	Anabas_testudineus
ENSUMAG00000012237	RBM17	100	95.274	ENSAPLG00000004190	RBM17	100	95.274	Anas_platyrhynchos
ENSUMAG00000012237	RBM17	89	89.730	ENSACAG00000005418	RBM17	99	90.000	Anolis_carolinensis
ENSUMAG00000012237	RBM17	100	85.969	ENSANAG00000019330	-	97	94.068	Aotus_nancymaae
ENSUMAG00000012237	RBM17	100	99.002	ENSANAG00000030127	RBM17	100	99.002	Aotus_nancymaae
ENSUMAG00000012237	RBM17	100	80.905	ENSACLG00000003928	rbm17	100	80.905	Astatotilapia_calliptera
ENSUMAG00000012237	RBM17	100	77.638	ENSAMXG00000005853	rbm17	100	79.765	Astyanax_mexicanus
ENSUMAG00000012237	RBM17	100	99.002	ENSBTAG00000021951	RBM17	100	99.002	Bos_taurus
ENSUMAG00000012237	RBM17	100	97.506	ENSBTAG00000011094	-	100	97.506	Bos_taurus
ENSUMAG00000012237	RBM17	73	34.448	WBGene00010233	F58B3.7	91	32.817	Caenorhabditis_elegans
ENSUMAG00000012237	RBM17	100	99.002	ENSCJAG00000020573	RBM17	100	99.002	Callithrix_jacchus
ENSUMAG00000012237	RBM17	100	99.751	ENSCAFG00000005206	RBM17	100	99.751	Canis_familiaris
ENSUMAG00000012237	RBM17	100	97.938	ENSCAFG00020005420	RBM17	100	97.938	Canis_lupus_dingo
ENSUMAG00000012237	RBM17	100	96.259	ENSCHIG00000019921	-	100	96.259	Capra_hircus
ENSUMAG00000012237	RBM17	100	99.002	ENSCHIG00000023204	-	100	99.002	Capra_hircus
ENSUMAG00000012237	RBM17	100	97.037	ENSTSYG00000001165	RBM17	100	97.037	Carlito_syrichta
ENSUMAG00000012237	RBM17	96	79.781	ENSCAPG00000006275	RBM17	100	84.438	Cavia_aperea
ENSUMAG00000012237	RBM17	100	97.927	ENSCPOG00000005679	RBM17	99	97.927	Cavia_porcellus
ENSUMAG00000012237	RBM17	100	99.002	ENSCCAG00000018655	RBM17	100	99.002	Cebus_capucinus
ENSUMAG00000012237	RBM17	100	99.002	ENSCATG00000041566	RBM17	100	99.002	Cercocebus_atys
ENSUMAG00000012237	RBM17	100	98.025	ENSCLAG00000012195	RBM17	99	98.025	Chinchilla_lanigera
ENSUMAG00000012237	RBM17	100	99.002	ENSCSAG00000013564	RBM17	100	99.002	Chlorocebus_sabaeus
ENSUMAG00000012237	RBM17	92	79.189	ENSCHOG00000005131	RBM17	100	79.189	Choloepus_hoffmanni
ENSUMAG00000012237	RBM17	100	94.527	ENSCPBG00000019836	RBM17	100	94.527	Chrysemys_picta_bellii
ENSUMAG00000012237	RBM17	100	47.343	ENSCSAVG00000008782	-	100	46.860	Ciona_savignyi
ENSUMAG00000012237	RBM17	98	85.561	ENSCANG00000023715	-	100	84.694	Colobus_angolensis_palliatus
ENSUMAG00000012237	RBM17	100	98.753	ENSCANG00000030987	RBM17	100	98.753	Colobus_angolensis_palliatus
ENSUMAG00000012237	RBM17	100	98.025	ENSCGRG00001013842	Rbm17	100	98.025	Cricetulus_griseus_chok1gshd
ENSUMAG00000012237	RBM17	100	75.561	ENSCGRG00001009256	-	100	73.580	Cricetulus_griseus_chok1gshd
ENSUMAG00000012237	RBM17	100	98.025	ENSCGRG00000006907	Rbm17	100	98.025	Cricetulus_griseus_crigri
ENSUMAG00000012237	RBM17	100	79.557	ENSCSEG00000018164	rbm17	100	80.296	Cynoglossus_semilaevis
ENSUMAG00000012237	RBM17	100	78.880	ENSCVAG00000002476	rbm17	100	78.880	Cyprinodon_variegatus
ENSUMAG00000012237	RBM17	100	78.588	ENSDARG00000031346	rbm17	100	78.588	Danio_rerio
ENSUMAG00000012237	RBM17	100	98.504	ENSDNOG00000035920	RBM17	100	98.504	Dasypus_novemcinctus
ENSUMAG00000012237	RBM17	99	36.203	FBgn0086683	Spf45	99	36.476	Drosophila_melanogaster
ENSUMAG00000012237	RBM17	100	74.813	ENSETEG00000006642	RBM17	87	96.714	Echinops_telfairi
ENSUMAG00000012237	RBM17	66	70.732	ENSEBUG00000010253	rbm17	85	70.732	Eptatretus_burgeri
ENSUMAG00000012237	RBM17	92	95.946	ENSEASG00005009236	-	100	95.946	Equus_asinus_asinus
ENSUMAG00000012237	RBM17	100	97.933	ENSEASG00005019205	-	100	97.933	Equus_asinus_asinus
ENSUMAG00000012237	RBM17	100	88.778	ENSECAG00000001379	-	100	88.778	Equus_caballus
ENSUMAG00000012237	RBM17	100	89.034	ENSECAG00000008939	RBM17	100	89.034	Equus_caballus
ENSUMAG00000012237	RBM17	86	80.814	ENSEEUG00000013077	RBM17	100	80.814	Erinaceus_europaeus
ENSUMAG00000012237	RBM17	100	77.315	ENSELUG00000006440	rbm17	100	77.315	Esox_lucius
ENSUMAG00000012237	RBM17	100	99.751	ENSFCAG00000031988	RBM17	100	99.751	Felis_catus
ENSUMAG00000012237	RBM17	100	94.264	ENSFALG00000001790	RBM17	100	94.264	Ficedula_albicollis
ENSUMAG00000012237	RBM17	100	98.025	ENSFDAG00000007470	RBM17	100	98.025	Fukomys_damarensis
ENSUMAG00000012237	RBM17	100	81.701	ENSFHEG00000001266	rbm17	100	82.474	Fundulus_heteroclitus
ENSUMAG00000012237	RBM17	99	75.534	ENSGMOG00000008438	rbm17	100	75.534	Gadus_morhua
ENSUMAG00000012237	RBM17	100	95.262	ENSGALG00000006332	RBM17	100	95.262	Gallus_gallus
ENSUMAG00000012237	RBM17	100	80.590	ENSGAFG00000019879	rbm17	100	81.327	Gambusia_affinis
ENSUMAG00000012237	RBM17	99	81.281	ENSGACG00000019174	rbm17	99	81.281	Gasterosteus_aculeatus
ENSUMAG00000012237	RBM17	100	94.527	ENSGAGG00000019906	RBM17	100	94.527	Gopherus_agassizii
ENSUMAG00000012237	RBM17	100	83.784	ENSHBUG00000016624	rbm17	100	83.784	Haplochromis_burtoni
ENSUMAG00000012237	RBM17	100	98.025	ENSHGLG00000011580	RBM17	100	98.025	Heterocephalus_glaber_female
ENSUMAG00000012237	RBM17	100	77.720	ENSHGLG00100010556	-	100	76.166	Heterocephalus_glaber_male
ENSUMAG00000012237	RBM17	100	98.025	ENSHGLG00100010460	RBM17	100	98.025	Heterocephalus_glaber_male
ENSUMAG00000012237	RBM17	99	78.043	ENSHCOG00000010865	rbm17	100	78.043	Hippocampus_comes
ENSUMAG00000012237	RBM17	100	77.986	ENSIPUG00000007699	Rbm17	100	78.141	Ictalurus_punctatus
ENSUMAG00000012237	RBM17	100	98.272	ENSSTOG00000013591	RBM17	100	98.272	Ictidomys_tridecemlineatus
ENSUMAG00000012237	RBM17	100	73.317	ENSJJAG00000000993	-	100	69.975	Jaculus_jaculus
ENSUMAG00000012237	RBM17	100	98.025	ENSJJAG00000022886	Rbm17	100	98.025	Jaculus_jaculus
ENSUMAG00000012237	RBM17	100	79.899	ENSKMAG00000021400	rbm17	100	79.607	Kryptolebias_marmoratus
ENSUMAG00000012237	RBM17	100	82.310	ENSLBEG00000000881	rbm17	100	79.009	Labrus_bergylta
ENSUMAG00000012237	RBM17	99	69.176	ENSLACG00000017297	RBM17	99	69.176	Latimeria_chalumnae
ENSUMAG00000012237	RBM17	100	86.914	ENSLOCG00000015659	rbm17	100	86.914	Lepisosteus_oculatus
ENSUMAG00000012237	RBM17	100	97.543	ENSLAFG00000011629	RBM17	100	97.543	Loxodonta_africana
ENSUMAG00000012237	RBM17	100	99.002	ENSMFAG00000035521	RBM17	100	99.002	Macaca_fascicularis
ENSUMAG00000012237	RBM17	100	99.002	ENSMMUG00000015152	RBM17	100	99.002	Macaca_mulatta
ENSUMAG00000012237	RBM17	100	99.002	ENSMNEG00000017264	RBM17	100	99.002	Macaca_nemestrina
ENSUMAG00000012237	RBM17	100	99.002	ENSMLEG00000029340	RBM17	100	99.002	Mandrillus_leucophaeus
ENSUMAG00000012237	RBM17	100	78.302	ENSMAMG00000000387	rbm17	100	78.302	Mastacembelus_armatus
ENSUMAG00000012237	RBM17	100	80.905	ENSMZEG00005015179	rbm17	100	80.905	Maylandia_zebra
ENSUMAG00000012237	RBM17	100	93.382	ENSMGAG00000003981	RBM17	100	93.382	Meleagris_gallopavo
ENSUMAG00000012237	RBM17	100	98.025	ENSMAUG00000019247	Rbm17	100	98.025	Mesocricetus_auratus
ENSUMAG00000012237	RBM17	100	89.976	ENSMICG00000041489	-	100	89.976	Microcebus_murinus
ENSUMAG00000012237	RBM17	100	97.531	ENSMICG00000003976	-	100	97.531	Microcebus_murinus
ENSUMAG00000012237	RBM17	93	79.733	ENSMOCG00000014517	-	99	79.733	Microtus_ochrogaster
ENSUMAG00000012237	RBM17	100	98.025	ENSMOCG00000011847	Rbm17	100	98.025	Microtus_ochrogaster
ENSUMAG00000012237	RBM17	100	75.426	ENSMMOG00000010264	rbm17	100	74.209	Mola_mola
ENSUMAG00000012237	RBM17	100	97.756	ENSMODG00000016648	RBM17	100	97.756	Monodelphis_domestica
ENSUMAG00000012237	RBM17	100	81.748	ENSMALG00000010597	rbm17	100	81.748	Monopterus_albus
ENSUMAG00000012237	RBM17	100	97.778	MGP_CAROLIEiJ_G0023173	Rbm17	100	97.778	Mus_caroli
ENSUMAG00000012237	RBM17	100	97.778	ENSMUSG00000037197	Rbm17	100	97.778	Mus_musculus
ENSUMAG00000012237	RBM17	100	97.284	MGP_PahariEiJ_G0019233	Rbm17	100	97.284	Mus_pahari
ENSUMAG00000012237	RBM17	100	97.778	MGP_SPRETEiJ_G0024091	Rbm17	100	97.778	Mus_spretus
ENSUMAG00000012237	RBM17	86	99.133	ENSMPUG00000016359	RBM17	97	99.133	Mustela_putorius_furo
ENSUMAG00000012237	RBM17	100	96.305	ENSMLUG00000002302	-	100	96.305	Myotis_lucifugus
ENSUMAG00000012237	RBM17	100	93.516	ENSMLUG00000025709	-	100	93.516	Myotis_lucifugus
ENSUMAG00000012237	RBM17	100	98.025	ENSNGAG00000000741	Rbm17	100	98.025	Nannospalax_galili
ENSUMAG00000012237	RBM17	100	69.077	ENSNGAG00000000663	-	100	68.657	Nannospalax_galili
ENSUMAG00000012237	RBM17	100	81.654	ENSNBRG00000018148	rbm17	100	81.654	Neolamprologus_brichardi
ENSUMAG00000012237	RBM17	100	99.002	ENSNLEG00000033350	RBM17	100	99.002	Nomascus_leucogenys
ENSUMAG00000012237	RBM17	100	91.771	ENSMEUG00000011347	RBM17	100	91.771	Notamacropus_eugenii
ENSUMAG00000012237	RBM17	100	85.786	ENSOPRG00000002993	RBM17	100	85.786	Ochotona_princeps
ENSUMAG00000012237	RBM17	100	97.783	ENSODEG00000004393	RBM17	100	97.783	Octodon_degus
ENSUMAG00000012237	RBM17	97	74.555	ENSODEG00000007286	-	99	74.555	Octodon_degus
ENSUMAG00000012237	RBM17	100	83.784	ENSONIG00000011838	rbm17	100	83.784	Oreochromis_niloticus
ENSUMAG00000012237	RBM17	100	96.278	ENSOANG00000015455	RBM17	100	96.278	Ornithorhynchus_anatinus
ENSUMAG00000012237	RBM17	100	80.101	ENSORLG00000028798	rbm17	100	80.590	Oryzias_latipes
ENSUMAG00000012237	RBM17	100	82.216	ENSORLG00020004593	rbm17	100	83.763	Oryzias_latipes_hni
ENSUMAG00000012237	RBM17	100	83.538	ENSORLG00015000033	rbm17	100	83.538	Oryzias_latipes_hsok
ENSUMAG00000012237	RBM17	100	79.717	ENSOMEG00000012060	rbm17	100	88.050	Oryzias_melastigma
ENSUMAG00000012237	RBM17	100	97.778	ENSOGAG00000015687	RBM17	100	97.778	Otolemur_garnettii
ENSUMAG00000012237	RBM17	100	99.002	ENSOARG00000012975	RBM17	100	99.002	Ovis_aries
ENSUMAG00000012237	RBM17	100	99.002	ENSPPAG00000032347	RBM17	100	99.002	Pan_paniscus
ENSUMAG00000012237	RBM17	100	99.751	ENSPPRG00000010706	RBM17	100	99.751	Panthera_pardus
ENSUMAG00000012237	RBM17	100	99.751	ENSPTIG00000007596	RBM17	100	99.751	Panthera_tigris_altaica
ENSUMAG00000012237	RBM17	100	99.002	ENSPTRG00000002265	RBM17	100	99.002	Pan_troglodytes
ENSUMAG00000012237	RBM17	100	99.002	ENSPANG00000023425	RBM17	100	99.002	Papio_anubis
ENSUMAG00000012237	RBM17	100	78.517	ENSPKIG00000005048	-	100	78.169	Paramormyrops_kingsleyae
ENSUMAG00000012237	RBM17	100	80.706	ENSPKIG00000025526	rbm17	100	80.516	Paramormyrops_kingsleyae
ENSUMAG00000012237	RBM17	100	93.086	ENSPSIG00000012332	RBM17	100	93.086	Pelodiscus_sinensis
ENSUMAG00000012237	RBM17	100	79.000	ENSPMGG00000007980	rbm17	100	79.000	Periophthalmus_magnuspinnatus
ENSUMAG00000012237	RBM17	100	98.025	ENSPEMG00000014320	Rbm17	100	98.025	Peromyscus_maniculatus_bairdii
ENSUMAG00000012237	RBM17	100	97.519	ENSPCIG00000019260	-	100	97.519	Phascolarctos_cinereus
ENSUMAG00000012237	RBM17	100	78.066	ENSPFOG00000013271	rbm17	100	78.774	Poecilia_formosa
ENSUMAG00000012237	RBM17	100	78.827	ENSPLAG00000004455	rbm17	100	79.009	Poecilia_latipinna
ENSUMAG00000012237	RBM17	100	82.064	ENSPMEG00000014864	rbm17	100	82.064	Poecilia_mexicana
ENSUMAG00000012237	RBM17	100	79.898	ENSPREG00000015589	rbm17	100	80.662	Poecilia_reticulata
ENSUMAG00000012237	RBM17	99	72.180	ENSPPYG00000019881	-	100	71.930	Pongo_abelii
ENSUMAG00000012237	RBM17	100	99.002	ENSPPYG00000002067	RBM17	100	99.002	Pongo_abelii
ENSUMAG00000012237	RBM17	81	71.207	ENSPPYG00000019042	-	100	70.898	Pongo_abelii
ENSUMAG00000012237	RBM17	100	91.022	ENSPCAG00000016879	RBM17	100	91.022	Procavia_capensis
ENSUMAG00000012237	RBM17	100	98.753	ENSPCOG00000027881	RBM17	100	98.753	Propithecus_coquereli
ENSUMAG00000012237	RBM17	100	88.030	ENSPVAG00000015499	RBM17	100	86.534	Pteropus_vampyrus
ENSUMAG00000012237	RBM17	100	79.634	ENSPNYG00000015274	rbm17	100	79.634	Pundamilia_nyererei
ENSUMAG00000012237	RBM17	100	79.765	ENSPNAG00000030046	rbm17	100	81.360	Pygocentrus_nattereri
ENSUMAG00000012237	RBM17	100	98.025	ENSRNOG00000018767	Rbm17	100	98.025	Rattus_norvegicus
ENSUMAG00000012237	RBM17	100	99.002	ENSRBIG00000043727	RBM17	100	99.002	Rhinopithecus_bieti
ENSUMAG00000012237	RBM17	100	99.002	ENSRROG00000044142	RBM17	100	99.002	Rhinopithecus_roxellana
ENSUMAG00000012237	RBM17	100	88.060	ENSSBOG00000023653	-	100	88.060	Saimiri_boliviensis_boliviensis
ENSUMAG00000012237	RBM17	100	98.753	ENSSBOG00000031661	-	100	98.753	Saimiri_boliviensis_boliviensis
ENSUMAG00000012237	RBM17	100	97.756	ENSSHAG00000012480	-	100	97.756	Sarcophilus_harrisii
ENSUMAG00000012237	RBM17	100	83.047	ENSSFOG00015009892	rbm17	100	83.047	Scleropages_formosus
ENSUMAG00000012237	RBM17	100	80.362	ENSSMAG00000012368	rbm17	100	80.620	Scophthalmus_maximus
ENSUMAG00000012237	RBM17	100	83.505	ENSSDUG00000015015	rbm17	100	83.505	Seriola_dumerili
ENSUMAG00000012237	RBM17	100	83.505	ENSSLDG00000014486	rbm17	100	83.505	Seriola_lalandi_dorsalis
ENSUMAG00000012237	RBM17	59	79.237	ENSSARG00000001792	-	100	79.237	Sorex_araneus
ENSUMAG00000012237	RBM17	99	94.514	ENSSPUG00000001036	RBM17	99	94.514	Sphenodon_punctatus
ENSUMAG00000012237	RBM17	100	82.801	ENSSPAG00000002338	rbm17	100	82.801	Stegastes_partitus
ENSUMAG00000012237	RBM17	100	98.753	ENSSSCG00000011134	RBM17	100	98.753	Sus_scrofa
ENSUMAG00000012237	RBM17	100	93.580	ENSTGUG00000002013	RBM17	100	93.580	Taeniopygia_guttata
ENSUMAG00000012237	RBM17	100	82.759	ENSTRUG00000010698	rbm17	100	82.759	Takifugu_rubripes
ENSUMAG00000012237	RBM17	100	82.641	ENSTNIG00000006892	rbm17	100	82.641	Tetraodon_nigroviridis
ENSUMAG00000012237	RBM17	100	77.307	ENSTBEG00000014686	RBM17	100	77.307	Tupaia_belangeri
ENSUMAG00000012237	RBM17	90	98.889	ENSTTRG00000001344	RBM17	100	98.889	Tursiops_truncatus
ENSUMAG00000012237	RBM17	100	97.194	ENSUAMG00000009499	RBM17	100	97.194	Ursus_americanus
ENSUMAG00000012237	RBM17	100	84.788	ENSVPAG00000005497	RBM17	100	84.788	Vicugna_pacos
ENSUMAG00000012237	RBM17	100	97.938	ENSVVUG00000006780	RBM17	100	97.938	Vulpes_vulpes
ENSUMAG00000012237	RBM17	99	85.821	ENSXETG00000018123	rbm17	100	85.821	Xenopus_tropicalis
ENSUMAG00000012237	RBM17	100	80.590	ENSXMAG00000008674	rbm17	100	81.327	Xiphophorus_maculatus