EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000012322 (Gene tree)
Gene ID: 103668968
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 10328 bases
Position: chrKK498516.1:3954175-3964502
Accession: 5048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000017998	SAP	PF02037.27	8.7e-10	1	1
ENSUMAP00000017988	SAP	PF02037.27	9.7e-10	1	1
ENSUMAP00000017965	SAP	PF02037.27	9.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000021372	HNRNPU-205	2070	-	ENSUMAP00000018079	689 (aa)	-	-
ENSUMAT00000021290	HNRNPU-204	2115	-	ENSUMAP00000018013	704 (aa)	-	-
ENSUMAT00000021273	HNRNPU-203	2043	-	ENSUMAP00000017998	680 (aa)	-	-
ENSUMAT00000021258	HNRNPU-202	2235	-	ENSUMAP00000017988	744 (aa)	-	-
ENSUMAT00000021397	HNRNPU-206	1887	-	ENSUMAP00000018097	628 (aa)	-	-
ENSUMAT00000021234	HNRNPU-201	2304	-	ENSUMAP00000017965	767 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000012322's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000012322's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000012322	HNRNPU	98	96.396	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSUMAG00000012322	HNRNPU	100	52.334	ENSAPOG00000017400	hnrnpub	81	57.143	Acanthochromis_polyacanthus
ENSUMAG00000012322	HNRNPU	97	99.010	ENSAMEG00000009145	HNRNPU	85	100.000	Ailuropoda_melanoleuca
ENSUMAG00000012322	HNRNPU	100	54.741	ENSACIG00000012138	hnrnpub	85	72.093	Amphilophus_citrinellus
ENSUMAG00000012322	HNRNPU	100	52.334	ENSAOCG00000015843	hnrnpub	86	56.825	Amphiprion_ocellaris
ENSUMAG00000012322	HNRNPU	100	52.334	ENSAPEG00000014679	hnrnpub	86	56.825	Amphiprion_percula
ENSUMAG00000012322	HNRNPU	76	65.385	ENSATEG00000016178	hnrnpub	92	53.008	Anabas_testudineus
ENSUMAG00000012322	HNRNPU	86	88.519	ENSACAG00000004511	HNRNPU	79	88.353	Anolis_carolinensis
ENSUMAG00000012322	HNRNPU	98	96.396	ENSANAG00000033895	-	89	99.000	Aotus_nancymaae
ENSUMAG00000012322	HNRNPU	84	74.419	ENSACLG00000008165	hnrnpub	85	74.419	Astatotilapia_calliptera
ENSUMAG00000012322	HNRNPU	98	95.495	ENSBTAG00000007606	HNRNPU	87	98.000	Bos_taurus
ENSUMAG00000012322	HNRNPU	97	98.020	ENSCJAG00000016914	HNRNPU	98	89.650	Callithrix_jacchus
ENSUMAG00000012322	HNRNPU	99	99.010	ENSCAFG00020000918	HNRNPU	89	100.000	Canis_lupus_dingo
ENSUMAG00000012322	HNRNPU	99	94.643	ENSCHIG00000004900	HNRNPU	89	98.000	Capra_hircus
ENSUMAG00000012322	HNRNPU	97	94.671	ENSCPOG00000011887	HNRNPU	99	84.088	Cavia_porcellus
ENSUMAG00000012322	HNRNPU	98	96.396	ENSCCAG00000037859	-	98	89.510	Cebus_capucinus
ENSUMAG00000012322	HNRNPU	98	95.495	ENSCATG00000035273	HNRNPU	98	89.510	Cercocebus_atys
ENSUMAG00000012322	HNRNPU	97	94.671	ENSCLAG00000007100	HNRNPU	99	83.883	Chinchilla_lanigera
ENSUMAG00000012322	HNRNPU	98	95.495	ENSCSAG00000009219	HNRNPU	89	98.000	Chlorocebus_sabaeus
ENSUMAG00000012322	HNRNPU	89	98.039	ENSCHOG00000001387	HNRNPU	78	98.039	Choloepus_hoffmanni
ENSUMAG00000012322	HNRNPU	98	83.627	ENSCPBG00000009415	HNRNPU	82	89.753	Chrysemys_picta_bellii
ENSUMAG00000012322	HNRNPU	98	96.364	ENSCANG00000022780	HNRNPU	92	94.595	Colobus_angolensis_palliatus
ENSUMAG00000012322	HNRNPU	97	94.840	ENSCGRG00001020525	Hnrnpu	99	85.264	Cricetulus_griseus_chok1gshd
ENSUMAG00000012322	HNRNPU	87	61.290	ENSCSEG00000010804	hnrnpub	89	62.591	Cynoglossus_semilaevis
ENSUMAG00000012322	HNRNPU	86	64.912	ENSCVAG00000004280	hnrnpub	85	64.912	Cyprinodon_variegatus
ENSUMAG00000012322	HNRNPU	86	60.359	ENSDARG00000015206	hnrnpua	100	52.559	Danio_rerio
ENSUMAG00000012322	HNRNPU	82	76.744	ENSDARG00000004735	hnrnpub	100	52.138	Danio_rerio
ENSUMAG00000012322	HNRNPU	99	86.078	ENSDNOG00000000215	HNRNPU	99	86.078	Dasypus_novemcinctus
ENSUMAG00000012322	HNRNPU	96	94.671	ENSDORG00000015491	Hnrnpu	99	87.548	Dipodomys_ordii
ENSUMAG00000012322	HNRNPU	98	94.316	ENSETEG00000014565	HNRNPU	87	97.138	Echinops_telfairi
ENSUMAG00000012322	HNRNPU	97	96.040	ENSEASG00005003017	HNRNPU	89	97.000	Equus_asinus_asinus
ENSUMAG00000012322	HNRNPU	97	95.050	ENSECAG00000007955	HNRNPU	99	86.177	Equus_caballus
ENSUMAG00000012322	HNRNPU	100	53.765	ENSELUG00000011966	hnrnpua	90	59.437	Esox_lucius
ENSUMAG00000012322	HNRNPU	84	68.085	ENSELUG00000010733	hnrnpub	83	68.085	Esox_lucius
ENSUMAG00000012322	HNRNPU	98	94.849	ENSFCAG00000002156	HNRNPU	99	86.104	Felis_catus
ENSUMAG00000012322	HNRNPU	99	87.500	ENSFDAG00000006026	HNRNPU	99	97.643	Fukomys_damarensis
ENSUMAG00000012322	HNRNPU	85	63.158	ENSFHEG00000022639	hnrnpub	70	60.748	Fundulus_heteroclitus
ENSUMAG00000012322	HNRNPU	85	70.588	ENSGMOG00000001755	hnrnpub	99	53.129	Gadus_morhua
ENSUMAG00000012322	HNRNPU	98	83.480	ENSGALG00000010671	HNRNPU	99	70.630	Gallus_gallus
ENSUMAG00000012322	HNRNPU	84	70.213	ENSGAFG00000009369	hnrnpub	84	70.213	Gambusia_affinis
ENSUMAG00000012322	HNRNPU	95	69.388	ENSGACG00000004679	hnrnpub	83	61.667	Gasterosteus_aculeatus
ENSUMAG00000012322	HNRNPU	99	96.396	ENSGGOG00000004061	HNRNPU	98	89.540	Gorilla_gorilla
ENSUMAG00000012322	HNRNPU	83	74.419	ENSHBUG00000012290	hnrnpub	85	74.419	Haplochromis_burtoni
ENSUMAG00000012322	HNRNPU	97	94.849	ENSHGLG00000010594	-	89	95.603	Heterocephalus_glaber_female
ENSUMAG00000012322	HNRNPU	99	86.176	ENSHGLG00100015093	HNRNPU	99	97.983	Heterocephalus_glaber_male
ENSUMAG00000012322	HNRNPU	84	72.973	ENSHCOG00000020091	hnrnpub	83	71.111	Hippocampus_comes
ENSUMAG00000012322	HNRNPU	84	70.213	ENSIPUG00000007749	hnrnpu	95	65.385	Ictalurus_punctatus
ENSUMAG00000012322	HNRNPU	98	93.961	ENSJJAG00000011371	Hnrnpu	99	83.333	Jaculus_jaculus
ENSUMAG00000012322	HNRNPU	87	57.576	ENSKMAG00000004532	hnrnpub	91	55.132	Kryptolebias_marmoratus
ENSUMAG00000012322	HNRNPU	88	56.662	ENSLBEG00000022520	hnrnpub	100	51.395	Labrus_bergylta
ENSUMAG00000012322	HNRNPU	97	76.000	ENSLACG00000017463	HNRNPU	99	60.494	Latimeria_chalumnae
ENSUMAG00000012322	HNRNPU	98	72.340	ENSLOCG00000016652	hnrnpua	99	59.660	Lepisosteus_oculatus
ENSUMAG00000012322	HNRNPU	98	94.595	ENSLAFG00000021377	HNRNPU	99	84.906	Loxodonta_africana
ENSUMAG00000012322	HNRNPU	98	95.495	ENSMFAG00000037308	HNRNPU	98	89.510	Macaca_fascicularis
ENSUMAG00000012322	HNRNPU	98	95.495	ENSMMUG00000021098	HNRNPU	89	98.000	Macaca_mulatta
ENSUMAG00000012322	HNRNPU	98	95.495	ENSMNEG00000043645	HNRNPU	98	89.510	Macaca_nemestrina
ENSUMAG00000012322	HNRNPU	86	66.038	ENSMAMG00000007196	hnrnpub	87	66.038	Mastacembelus_armatus
ENSUMAG00000012322	HNRNPU	84	74.419	ENSMZEG00005003185	hnrnpub	85	74.419	Maylandia_zebra
ENSUMAG00000012322	HNRNPU	97	94.840	ENSMAUG00000008842	Hnrnpu	99	84.511	Mesocricetus_auratus
ENSUMAG00000012322	HNRNPU	98	94.671	ENSMICG00000004616	HNRNPU	99	86.221	Microcebus_murinus
ENSUMAG00000012322	HNRNPU	97	94.662	ENSMOCG00000015623	Hnrnpu	99	84.887	Microtus_ochrogaster
ENSUMAG00000012322	HNRNPU	98	90.451	ENSMODG00000006515	HNRNPU	99	79.671	Monodelphis_domestica
ENSUMAG00000012322	HNRNPU	79	63.462	ENSMALG00000018243	hnrnpub	91	55.186	Monopterus_albus
ENSUMAG00000012322	HNRNPU	97	94.662	MGP_CAROLIEiJ_G0014962	Hnrnpu	99	84.944	Mus_caroli
ENSUMAG00000012322	HNRNPU	97	94.662	ENSMUSG00000039630	Hnrnpu	99	84.837	Mus_musculus
ENSUMAG00000012322	HNRNPU	97	93.772	MGP_PahariEiJ_G0028193	Hnrnpu	99	83.787	Mus_pahari
ENSUMAG00000012322	HNRNPU	97	94.662	MGP_SPRETEiJ_G0015761	Hnrnpu	99	84.837	Mus_spretus
ENSUMAG00000012322	HNRNPU	97	92.730	ENSMLUG00000000475	HNRNPU	99	86.700	Myotis_lucifugus
ENSUMAG00000012322	HNRNPU	98	94.316	ENSNGAG00000019075	Hnrnpu	89	95.114	Nannospalax_galili
ENSUMAG00000012322	HNRNPU	83	74.419	ENSNBRG00000017855	hnrnpub	85	74.419	Neolamprologus_brichardi
ENSUMAG00000012322	HNRNPU	97	86.438	ENSMEUG00000000541	HNRNPU	97	76.601	Notamacropus_eugenii
ENSUMAG00000012322	HNRNPU	66	95.588	ENSODEG00000014458	-	98	95.588	Octodon_degus
ENSUMAG00000012322	HNRNPU	81	74.419	ENSONIG00000001260	hnrnpub	88	74.419	Oreochromis_niloticus
ENSUMAG00000012322	HNRNPU	96	94.595	ENSOCUG00000014469	HNRNPU	77	98.000	Oryctolagus_cuniculus
ENSUMAG00000012322	HNRNPU	81	74.419	ENSORLG00020005363	hnrnpub	86	74.419	Oryzias_latipes_hni
ENSUMAG00000012322	HNRNPU	81	74.419	ENSORLG00015001190	hnrnpub	86	74.419	Oryzias_latipes_hsok
ENSUMAG00000012322	HNRNPU	100	50.646	ENSOMEG00000014951	hnrnpub	83	74.419	Oryzias_melastigma
ENSUMAG00000012322	HNRNPU	98	95.495	ENSOGAG00000014024	HNRNPU	90	98.000	Otolemur_garnettii
ENSUMAG00000012322	HNRNPU	90	98.276	ENSOARG00000004985	HNRNPU	99	86.693	Ovis_aries
ENSUMAG00000012322	HNRNPU	98	96.396	ENSPPAG00000038652	HNRNPU	98	89.510	Pan_paniscus
ENSUMAG00000012322	HNRNPU	98	97.297	ENSPPRG00000002662	HNRNPU	99	86.649	Panthera_pardus
ENSUMAG00000012322	HNRNPU	98	96.396	ENSPTRG00000002182	HNRNPU	98	89.510	Pan_troglodytes
ENSUMAG00000012322	HNRNPU	98	95.495	ENSPANG00000011643	HNRNPU	98	89.510	Papio_anubis
ENSUMAG00000012322	HNRNPU	100	58.912	ENSPKIG00000022332	hnrnpub	100	57.812	Paramormyrops_kingsleyae
ENSUMAG00000012322	HNRNPU	97	72.917	ENSPKIG00000006885	hnrnpua	86	72.917	Paramormyrops_kingsleyae
ENSUMAG00000012322	HNRNPU	98	92.540	ENSPCIG00000008657	HNRNPU	86	95.301	Phascolarctos_cinereus
ENSUMAG00000012322	HNRNPU	84	58.462	ENSPFOG00000002908	hnrnpub	100	51.171	Poecilia_formosa
ENSUMAG00000012322	HNRNPU	84	58.462	ENSPLAG00000004160	hnrnpub	100	51.291	Poecilia_latipinna
ENSUMAG00000012322	HNRNPU	98	93.519	ENSPCOG00000003883	-	99	87.209	Propithecus_coquereli
ENSUMAG00000012322	HNRNPU	98	94.849	ENSPCOG00000018655	-	90	97.000	Propithecus_coquereli
ENSUMAG00000012322	HNRNPU	98	95.495	ENSPVAG00000002581	HNRNPU	99	83.049	Pteropus_vampyrus
ENSUMAG00000012322	HNRNPU	83	74.419	ENSPNYG00000021642	hnrnpub	85	74.419	Pundamilia_nyererei
ENSUMAG00000012322	HNRNPU	100	58.759	ENSPNAG00000001055	hnrnpub	100	63.224	Pygocentrus_nattereri
ENSUMAG00000012322	HNRNPU	97	94.662	ENSRNOG00000033790	Hnrnpu	99	85.264	Rattus_norvegicus
ENSUMAG00000012322	HNRNPU	98	94.595	ENSRBIG00000031519	HNRNPU	92	93.694	Rhinopithecus_bieti
ENSUMAG00000012322	HNRNPU	98	94.595	ENSRROG00000041642	HNRNPU	98	88.734	Rhinopithecus_roxellana
ENSUMAG00000012322	HNRNPU	96	72.917	ENSSFOG00015019004	hnrnpu	98	59.527	Scleropages_formosus
ENSUMAG00000012322	HNRNPU	98	64.332	ENSSFOG00015001124	hnrnpub	87	66.354	Scleropages_formosus
ENSUMAG00000012322	HNRNPU	82	63.462	ENSSMAG00000003607	hnrnpub	100	50.397	Scophthalmus_maximus
ENSUMAG00000012322	HNRNPU	89	54.366	ENSSDUG00000005912	hnrnpub	85	63.462	Seriola_dumerili
ENSUMAG00000012322	HNRNPU	88	56.212	ENSSLDG00000004899	hnrnpub	81	70.213	Seriola_lalandi_dorsalis
ENSUMAG00000012322	HNRNPU	97	87.234	ENSSPUG00000011393	HNRNPU	86	89.037	Sphenodon_punctatus
ENSUMAG00000012322	HNRNPU	77	70.213	ENSSPAG00000011853	hnrnpub	86	70.213	Stegastes_partitus
ENSUMAG00000012322	HNRNPU	99	95.536	ENSSSCG00000010877	HNRNPU	89	99.000	Sus_scrofa
ENSUMAG00000012322	HNRNPU	85	63.063	ENSTRUG00000007759	hnrnpub	85	59.615	Takifugu_rubripes
ENSUMAG00000012322	HNRNPU	100	50.244	ENSTNIG00000009725	hnrnpub	90	62.500	Tetraodon_nigroviridis
ENSUMAG00000012322	HNRNPU	64	100.000	ENSTTRG00000005281	HNRNPU	56	100.000	Tursiops_truncatus
ENSUMAG00000012322	HNRNPU	97	99.010	ENSUAMG00000021120	HNRNPU	99	89.065	Ursus_americanus
ENSUMAG00000012322	HNRNPU	92	98.039	ENSVPAG00000010520	HNRNPU	90	98.039	Vicugna_pacos
ENSUMAG00000012322	HNRNPU	99	99.010	ENSVVUG00000026524	HNRNPU	89	100.000	Vulpes_vulpes
ENSUMAG00000012322	HNRNPU	87	93.939	ENSXETG00000011386	hnrnpu	99	67.419	Xenopus_tropicalis
ENSUMAG00000012322	HNRNPU	81	70.213	ENSXMAG00000010356	hnrnpub	86	70.213	Xiphophorus_maculatus