EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000012329 (Gene tree)
Gene ID: 103664180
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 43714 bases
Position: chrKK498599.1:269731-313444
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000016787	PRP4	PF08799.11	1.4e-12	1	1
ENSUMAP00000016787	Prp18	PF02840.15	2.9e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000019853	-	993	-	ENSUMAP00000016787	330 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000012329's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000012329's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000012329	-	100	94.444	ENSG00000165630	PRPF18	99	96.364	Homo_sapiens
ENSUMAG00000012329	-	100	80.409	ENSAPOG00000024177	prpf18	100	80.409	Acanthochromis_polyacanthus
ENSUMAG00000012329	-	100	95.029	ENSAMEG00000013591	-	100	95.029	Ailuropoda_melanoleuca
ENSUMAG00000012329	-	100	79.825	ENSACIG00000001186	prpf18	100	79.825	Amphilophus_citrinellus
ENSUMAG00000012329	-	98	80.000	ENSAOCG00000006572	prpf18	94	77.485	Amphiprion_ocellaris
ENSUMAG00000012329	-	100	80.409	ENSAPEG00000004564	prpf18	100	80.409	Amphiprion_percula
ENSUMAG00000012329	-	100	79.240	ENSATEG00000000303	prpf18	100	79.240	Anabas_testudineus
ENSUMAG00000012329	-	99	86.471	ENSAPLG00000003387	-	99	86.471	Anas_platyrhynchos
ENSUMAG00000012329	-	100	86.628	ENSACAG00000000818	-	100	86.628	Anolis_carolinensis
ENSUMAG00000012329	-	100	93.860	ENSANAG00000037445	-	100	93.860	Aotus_nancymaae
ENSUMAG00000012329	-	100	79.825	ENSACLG00000026296	prpf18	100	79.825	Astatotilapia_calliptera
ENSUMAG00000012329	-	100	79.429	ENSAMXG00000012848	prpf18	100	79.429	Astyanax_mexicanus
ENSUMAG00000012329	-	100	94.737	ENSBTAG00000017244	PRPF18	100	94.737	Bos_taurus
ENSUMAG00000012329	-	98	37.931	WBGene00009320	F32B6.3	97	37.931	Caenorhabditis_elegans
ENSUMAG00000012329	-	100	93.860	ENSCJAG00000009432	-	100	93.860	Callithrix_jacchus
ENSUMAG00000012329	-	100	95.029	ENSCAFG00000004735	-	100	95.029	Canis_familiaris
ENSUMAG00000012329	-	100	95.029	ENSCAFG00020007712	-	100	95.029	Canis_lupus_dingo
ENSUMAG00000012329	-	100	94.737	ENSCHIG00000000499	-	100	94.737	Capra_hircus
ENSUMAG00000012329	-	100	93.567	ENSTSYG00000003517	-	100	93.567	Carlito_syrichta
ENSUMAG00000012329	-	100	94.444	ENSCPOG00000021069	-	100	94.444	Cavia_porcellus
ENSUMAG00000012329	-	100	93.860	ENSCCAG00000036822	-	100	93.860	Cebus_capucinus
ENSUMAG00000012329	-	100	83.626	ENSCATG00000016633	-	100	83.626	Cercocebus_atys
ENSUMAG00000012329	-	100	94.152	ENSCLAG00000011770	-	100	94.152	Chinchilla_lanigera
ENSUMAG00000012329	-	100	92.023	ENSCSAG00000013109	-	100	92.023	Chlorocebus_sabaeus
ENSUMAG00000012329	-	100	84.270	ENSCPBG00000003100	-	100	84.831	Chrysemys_picta_bellii
ENSUMAG00000012329	-	99	52.353	ENSCING00000020481	-	97	52.353	Ciona_intestinalis
ENSUMAG00000012329	-	99	52.601	ENSCSAVG00000010546	-	99	52.616	Ciona_savignyi
ENSUMAG00000012329	-	100	94.152	ENSCANG00000034900	-	100	94.152	Colobus_angolensis_palliatus
ENSUMAG00000012329	-	100	93.860	ENSCGRG00001023665	Prpf18	100	93.860	Cricetulus_griseus_chok1gshd
ENSUMAG00000012329	-	100	93.860	ENSCGRG00000014690	Prpf18	100	93.860	Cricetulus_griseus_crigri
ENSUMAG00000012329	-	100	78.070	ENSCSEG00000005536	prpf18	99	78.070	Cynoglossus_semilaevis
ENSUMAG00000012329	-	100	79.240	ENSCVAG00000012401	prpf18	100	79.240	Cyprinodon_variegatus
ENSUMAG00000012329	-	100	79.532	ENSDARG00000058306	prpf18	100	79.532	Danio_rerio
ENSUMAG00000012329	-	100	94.152	ENSDNOG00000035607	-	100	94.152	Dasypus_novemcinctus
ENSUMAG00000012329	-	100	94.152	ENSDORG00000000858	Prpf18	100	94.152	Dipodomys_ordii
ENSUMAG00000012329	-	99	49.263	FBgn0027784	Prp18	98	48.968	Drosophila_melanogaster
ENSUMAG00000012329	-	100	82.749	ENSETEG00000015060	-	100	82.749	Echinops_telfairi
ENSUMAG00000012329	-	100	64.841	ENSEBUG00000016502	prpf18	99	63.977	Eptatretus_burgeri
ENSUMAG00000012329	-	100	94.737	ENSEASG00005019373	-	100	94.737	Equus_asinus_asinus
ENSUMAG00000012329	-	100	94.737	ENSECAG00000006997	PRPF18	100	94.737	Equus_caballus
ENSUMAG00000012329	-	76	100.000	ENSEEUG00000001171	-	79	100.000	Erinaceus_europaeus
ENSUMAG00000012329	-	100	77.259	ENSELUG00000022190	prpf18	100	77.259	Esox_lucius
ENSUMAG00000012329	-	100	94.737	ENSFCAG00000004436	-	100	94.737	Felis_catus
ENSUMAG00000012329	-	92	82.875	ENSFALG00000001912	-	97	83.692	Ficedula_albicollis
ENSUMAG00000012329	-	93	93.750	ENSFDAG00000014026	-	100	93.750	Fukomys_damarensis
ENSUMAG00000012329	-	99	59.710	ENSFDAG00000010713	-	97	59.710	Fukomys_damarensis
ENSUMAG00000012329	-	79	83.150	ENSFHEG00000020125	prpf18	98	83.146	Fundulus_heteroclitus
ENSUMAG00000012329	-	99	74.780	ENSGMOG00000012210	prpf18	99	74.780	Gadus_morhua
ENSUMAG00000012329	-	100	87.135	ENSGALG00000043593	-	100	87.135	Gallus_gallus
ENSUMAG00000012329	-	100	78.070	ENSGAFG00000006034	prpf18	100	78.070	Gambusia_affinis
ENSUMAG00000012329	-	100	76.608	ENSGACG00000012232	prpf18	100	76.608	Gasterosteus_aculeatus
ENSUMAG00000012329	-	100	87.427	ENSGAGG00000016878	-	100	87.427	Gopherus_agassizii
ENSUMAG00000012329	-	92	93.987	ENSGGOG00000025188	-	96	93.987	Gorilla_gorilla
ENSUMAG00000012329	-	100	79.825	ENSHBUG00000010264	prpf18	100	79.825	Haplochromis_burtoni
ENSUMAG00000012329	-	100	94.444	ENSHGLG00000018534	PRPF18	100	94.444	Heterocephalus_glaber_female
ENSUMAG00000012329	-	93	94.062	ENSHGLG00100012161	-	98	94.062	Heterocephalus_glaber_male
ENSUMAG00000012329	-	100	78.947	ENSHCOG00000015987	prpf18	100	78.947	Hippocampus_comes
ENSUMAG00000012329	-	100	77.054	ENSIPUG00000007432	prpf18	100	77.904	Ictalurus_punctatus
ENSUMAG00000012329	-	100	92.690	ENSSTOG00000008735	-	100	92.690	Ictidomys_tridecemlineatus
ENSUMAG00000012329	-	100	67.435	ENSJJAG00000015191	-	100	67.435	Jaculus_jaculus
ENSUMAG00000012329	-	100	94.444	ENSJJAG00000024041	-	100	94.444	Jaculus_jaculus
ENSUMAG00000012329	-	100	77.778	ENSKMAG00000012124	prpf18	100	77.778	Kryptolebias_marmoratus
ENSUMAG00000012329	-	99	78.402	ENSLBEG00000028466	prpf18	99	78.402	Labrus_bergylta
ENSUMAG00000012329	-	100	81.579	ENSLACG00000009885	prpf18	100	81.579	Latimeria_chalumnae
ENSUMAG00000012329	-	100	85.088	ENSLOCG00000016736	prpf18	100	85.088	Lepisosteus_oculatus
ENSUMAG00000012329	-	100	94.444	ENSLAFG00000007753	-	100	94.444	Loxodonta_africana
ENSUMAG00000012329	-	100	94.444	ENSMFAG00000000540	-	100	94.444	Macaca_fascicularis
ENSUMAG00000012329	-	100	94.444	ENSMMUG00000015071	PRPF18	100	94.444	Macaca_mulatta
ENSUMAG00000012329	-	100	94.444	ENSMNEG00000024679	-	100	94.444	Macaca_nemestrina
ENSUMAG00000012329	-	100	81.818	ENSMLEG00000031715	-	100	82.121	Mandrillus_leucophaeus
ENSUMAG00000012329	-	100	79.042	ENSMAMG00000006610	prpf18	100	79.042	Mastacembelus_armatus
ENSUMAG00000012329	-	100	79.825	ENSMZEG00005019392	prpf18	100	79.825	Maylandia_zebra
ENSUMAG00000012329	-	100	87.135	ENSMGAG00000005023	-	100	87.135	Meleagris_gallopavo
ENSUMAG00000012329	-	100	94.152	ENSMICG00000006572	-	100	94.152	Microcebus_murinus
ENSUMAG00000012329	-	100	94.444	ENSMOCG00000021468	Prpf18	100	94.444	Microtus_ochrogaster
ENSUMAG00000012329	-	100	78.070	ENSMMOG00000013012	prpf18	100	78.070	Mola_mola
ENSUMAG00000012329	-	100	81.871	ENSMODG00000024043	-	100	81.871	Monodelphis_domestica
ENSUMAG00000012329	-	96	85.799	ENSMODG00000016902	-	92	85.799	Monodelphis_domestica
ENSUMAG00000012329	-	100	73.143	ENSMALG00000005486	prpf18	100	73.429	Monopterus_albus
ENSUMAG00000012329	-	100	93.860	MGP_CAROLIEiJ_G0023143	Prpf18	100	97.260	Mus_caroli
ENSUMAG00000012329	-	100	93.567	ENSMUSG00000039449	Prpf18	100	97.260	Mus_musculus
ENSUMAG00000012329	-	100	94.152	MGP_PahariEiJ_G0019203	Prpf18	100	97.260	Mus_pahari
ENSUMAG00000012329	-	100	93.275	MGP_SPRETEiJ_G0024061	Prpf18	100	97.260	Mus_spretus
ENSUMAG00000012329	-	100	94.737	ENSMPUG00000000938	-	100	94.737	Mustela_putorius_furo
ENSUMAG00000012329	-	100	94.152	ENSMLUG00000009200	-	100	94.152	Myotis_lucifugus
ENSUMAG00000012329	-	100	93.860	ENSNGAG00000012500	-	100	93.860	Nannospalax_galili
ENSUMAG00000012329	-	66	85.652	ENSNGAG00000023550	-	82	85.652	Nannospalax_galili
ENSUMAG00000012329	-	100	79.825	ENSNBRG00000001778	prpf18	100	79.825	Neolamprologus_brichardi
ENSUMAG00000012329	-	100	94.444	ENSNLEG00000012186	-	100	94.444	Nomascus_leucogenys
ENSUMAG00000012329	-	100	60.526	ENSMEUG00000005032	-	100	60.526	Notamacropus_eugenii
ENSUMAG00000012329	-	77	74.717	ENSOPRG00000002153	-	100	74.717	Ochotona_princeps
ENSUMAG00000012329	-	100	93.567	ENSODEG00000003770	-	100	93.567	Octodon_degus
ENSUMAG00000012329	-	98	79.104	ENSONIG00000014854	prpf18	96	79.104	Oreochromis_niloticus
ENSUMAG00000012329	-	100	90.058	ENSOANG00000015404	-	100	90.058	Ornithorhynchus_anatinus
ENSUMAG00000012329	-	100	94.737	ENSOCUG00000027756	-	100	90.058	Oryctolagus_cuniculus
ENSUMAG00000012329	-	100	76.857	ENSORLG00000010293	prpf18	100	76.857	Oryzias_latipes
ENSUMAG00000012329	-	100	78.947	ENSORLG00020001530	prpf18	100	78.947	Oryzias_latipes_hni
ENSUMAG00000012329	-	100	79.240	ENSORLG00015013705	prpf18	100	79.240	Oryzias_latipes_hsok
ENSUMAG00000012329	-	100	80.409	ENSOMEG00000009167	prpf18	100	80.409	Oryzias_melastigma
ENSUMAG00000012329	-	100	93.860	ENSOGAG00000007294	-	100	93.860	Otolemur_garnettii
ENSUMAG00000012329	-	100	92.308	ENSOARG00000006243	-	100	92.308	Ovis_aries
ENSUMAG00000012329	-	100	94.444	ENSPPAG00000041959	-	100	94.444	Pan_paniscus
ENSUMAG00000012329	-	100	94.737	ENSPPRG00000000107	-	100	94.737	Panthera_pardus
ENSUMAG00000012329	-	100	94.444	ENSPTIG00000021094	-	100	94.444	Panthera_tigris_altaica
ENSUMAG00000012329	-	100	94.444	ENSPTRG00000002306	PRPF18	100	94.444	Pan_troglodytes
ENSUMAG00000012329	-	100	94.152	ENSPANG00000023346	-	100	94.152	Papio_anubis
ENSUMAG00000012329	-	91	98.113	ENSPKIG00000014128	prpf18	96	77.208	Paramormyrops_kingsleyae
ENSUMAG00000012329	-	100	88.012	ENSPSIG00000016064	-	100	88.012	Pelodiscus_sinensis
ENSUMAG00000012329	-	100	73.392	ENSPMGG00000016486	prpf18	100	73.392	Periophthalmus_magnuspinnatus
ENSUMAG00000012329	-	100	94.152	ENSPEMG00000013704	Prpf18	100	94.152	Peromyscus_maniculatus_bairdii
ENSUMAG00000012329	-	100	71.387	ENSPMAG00000000204	prpf18	100	71.387	Petromyzon_marinus
ENSUMAG00000012329	-	92	91.139	ENSPCIG00000012963	-	99	91.139	Phascolarctos_cinereus
ENSUMAG00000012329	-	100	76.857	ENSPFOG00000017611	prpf18	100	76.857	Poecilia_formosa
ENSUMAG00000012329	-	100	78.363	ENSPLAG00000000369	prpf18	100	78.363	Poecilia_latipinna
ENSUMAG00000012329	-	100	78.363	ENSPMEG00000005183	prpf18	100	78.363	Poecilia_mexicana
ENSUMAG00000012329	-	100	77.778	ENSPREG00000015232	prpf18	100	77.778	Poecilia_reticulata
ENSUMAG00000012329	-	100	94.152	ENSPPYG00000002101	PRPF18	100	94.152	Pongo_abelii
ENSUMAG00000012329	-	100	80.117	ENSPCAG00000010833	-	100	80.117	Procavia_capensis
ENSUMAG00000012329	-	100	86.842	ENSPCOG00000013057	-	100	86.842	Propithecus_coquereli
ENSUMAG00000012329	-	100	56.725	ENSPVAG00000002947	-	100	56.725	Pteropus_vampyrus
ENSUMAG00000012329	-	100	79.825	ENSPNYG00000003554	prpf18	100	79.825	Pundamilia_nyererei
ENSUMAG00000012329	-	100	80.057	ENSPNAG00000023151	prpf18	100	80.057	Pygocentrus_nattereri
ENSUMAG00000012329	-	100	93.275	ENSRNOG00000018396	Prpf18	100	93.275	Rattus_norvegicus
ENSUMAG00000012329	-	100	93.860	ENSRBIG00000028028	-	100	93.860	Rhinopithecus_bieti
ENSUMAG00000012329	-	100	94.152	ENSRROG00000040695	-	100	94.152	Rhinopithecus_roxellana
ENSUMAG00000012329	-	100	93.860	ENSSBOG00000034482	-	100	93.860	Saimiri_boliviensis_boliviensis
ENSUMAG00000012329	-	100	73.099	ENSSHAG00000009669	-	100	73.099	Sarcophilus_harrisii
ENSUMAG00000012329	-	100	91.520	ENSSHAG00000016463	-	100	91.520	Sarcophilus_harrisii
ENSUMAG00000012329	-	77	40.377	ENSSFOG00015021154	-	89	44.206	Scleropages_formosus
ENSUMAG00000012329	-	98	77.101	ENSSFOG00015022118	prpf18	100	72.622	Scleropages_formosus
ENSUMAG00000012329	-	100	78.070	ENSSMAG00000005308	prpf18	100	78.070	Scophthalmus_maximus
ENSUMAG00000012329	-	100	80.117	ENSSDUG00000015428	prpf18	100	80.117	Seriola_dumerili
ENSUMAG00000012329	-	100	80.117	ENSSLDG00000023989	prpf18	100	80.117	Seriola_lalandi_dorsalis
ENSUMAG00000012329	-	100	64.327	ENSSARG00000005307	-	100	64.327	Sorex_araneus
ENSUMAG00000012329	-	100	87.427	ENSSPUG00000002619	-	100	87.427	Sphenodon_punctatus
ENSUMAG00000012329	-	100	79.532	ENSSPAG00000019502	prpf18	100	79.532	Stegastes_partitus
ENSUMAG00000012329	-	100	95.029	ENSSSCG00000026354	-	100	95.029	Sus_scrofa
ENSUMAG00000012329	-	100	87.135	ENSTGUG00000002286	-	100	87.135	Taeniopygia_guttata
ENSUMAG00000012329	-	100	76.901	ENSTRUG00000011278	prpf18	100	76.901	Takifugu_rubripes
ENSUMAG00000012329	-	100	76.901	ENSTNIG00000000911	prpf18	100	76.901	Tetraodon_nigroviridis
ENSUMAG00000012329	-	82	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSUMAG00000012329	-	100	94.152	ENSTTRG00000011117	PRPF18	100	94.152	Tursiops_truncatus
ENSUMAG00000012329	-	95	91.385	ENSUAMG00000001815	-	94	91.385	Ursus_americanus
ENSUMAG00000012329	-	100	88.889	ENSVPAG00000011486	-	100	88.889	Vicugna_pacos
ENSUMAG00000012329	-	100	95.029	ENSVVUG00000005453	-	100	95.029	Vulpes_vulpes
ENSUMAG00000012329	-	100	75.652	ENSXETG00000024057	prpf18	100	75.652	Xenopus_tropicalis
ENSUMAG00000012329	-	100	78.042	ENSXCOG00000020414	prpf18	100	78.042	Xiphophorus_couchianus
ENSUMAG00000012329	-	100	78.070	ENSXMAG00000004713	prpf18	91	78.070	Xiphophorus_maculatus