EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000012382 (Gene tree)
Gene ID: 103664192
Gene Symbol: RPP38
Alias: -
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 852 bases
Position: chrKK498599.1:1539443-1540294
Accession: 103664192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000016860	Ribosomal_L7Ae	PF01248.26	6.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000019930	RPP38-201	852	-	ENSUMAP00000016860	283 (aa)	XP_008690245	UPI0004E00676

Gene Model

Click here to download ENSUMAG00000012382's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03008	Ribosome biogenesis in eukaryotes	KEGG
umr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000012382's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000012382	RPP38	100	78.873	ENSG00000152464	RPP38	100	77.817	Homo_sapiens
ENSUMAG00000012382	RPP38	94	43.841	ENSAPOG00000001240	rpp38	96	43.060	Acanthochromis_polyacanthus
ENSUMAG00000012382	RPP38	100	97.527	ENSAMEG00000018832	RPP38	100	97.527	Ailuropoda_melanoleuca
ENSUMAG00000012382	RPP38	92	43.382	ENSACIG00000011592	rpp38	97	44.043	Amphilophus_citrinellus
ENSUMAG00000012382	RPP38	94	42.014	ENSAOCG00000017293	rpp38	97	41.297	Amphiprion_ocellaris
ENSUMAG00000012382	RPP38	94	43.956	ENSAPEG00000002315	rpp38	96	42.806	Amphiprion_percula
ENSUMAG00000012382	RPP38	96	43.728	ENSATEG00000000731	rpp38	98	42.652	Anabas_testudineus
ENSUMAG00000012382	RPP38	92	52.652	ENSAPLG00000002054	RPP38	96	52.174	Anas_platyrhynchos
ENSUMAG00000012382	RPP38	94	43.772	ENSACLG00000016958	rpp38	97	44.404	Astatotilapia_calliptera
ENSUMAG00000012382	RPP38	94	43.416	ENSACLG00000016962	rpp38	97	44.043	Astatotilapia_calliptera
ENSUMAG00000012382	RPP38	89	41.270	ENSAMXG00000025023	rpp38	98	41.516	Astyanax_mexicanus
ENSUMAG00000012382	RPP38	100	75.972	ENSBTAG00000007702	RPP38	100	75.265	Bos_taurus
ENSUMAG00000012382	RPP38	100	88.693	ENSCAFG00000024373	RPP38	100	87.633	Canis_familiaris
ENSUMAG00000012382	RPP38	100	88.693	ENSCAFG00020008008	RPP38	100	87.633	Canis_lupus_dingo
ENSUMAG00000012382	RPP38	100	75.972	ENSCHIG00000012484	RPP38	100	75.265	Capra_hircus
ENSUMAG00000012382	RPP38	100	75.439	ENSCPOG00000003981	RPP38	100	75.088	Cavia_porcellus
ENSUMAG00000012382	RPP38	100	77.895	ENSCLAG00000010194	RPP38	100	77.544	Chinchilla_lanigera
ENSUMAG00000012382	RPP38	94	79.323	ENSCSAG00000019055	RPP38	100	77.817	Chlorocebus_sabaeus
ENSUMAG00000012382	RPP38	100	82.807	ENSCHOG00000004335	RPP38	100	82.456	Choloepus_hoffmanni
ENSUMAG00000012382	RPP38	100	71.678	ENSCGRG00001001395	Rpp38	100	71.678	Cricetulus_griseus_chok1gshd
ENSUMAG00000012382	RPP38	100	71.678	ENSCGRG00000017441	Rpp38	100	71.678	Cricetulus_griseus_crigri
ENSUMAG00000012382	RPP38	94	41.667	ENSCSEG00000001721	rpp38	99	42.160	Cynoglossus_semilaevis
ENSUMAG00000012382	RPP38	95	41.608	ENSCVAG00000001676	rpp38	100	42.193	Cyprinodon_variegatus
ENSUMAG00000012382	RPP38	94	44.118	ENSDARG00000040350	rpp38	96	45.055	Danio_rerio
ENSUMAG00000012382	RPP38	100	79.225	ENSDNOG00000040314	RPP38	100	78.521	Dasypus_novemcinctus
ENSUMAG00000012382	RPP38	100	69.825	ENSDORG00000009783	Rpp38	100	69.474	Dipodomys_ordii
ENSUMAG00000012382	RPP38	100	75.439	ENSETEG00000002839	RPP38	100	74.737	Echinops_telfairi
ENSUMAG00000012382	RPP38	99	80.645	ENSEASG00005019783	RPP38	98	79.211	Equus_asinus_asinus
ENSUMAG00000012382	RPP38	100	75.618	ENSEEUG00000014677	RPP38	100	74.912	Erinaceus_europaeus
ENSUMAG00000012382	RPP38	88	44.689	ENSELUG00000010160	rpp38	96	42.953	Esox_lucius
ENSUMAG00000012382	RPP38	100	83.746	ENSFCAG00000022449	RPP38	100	82.332	Felis_catus
ENSUMAG00000012382	RPP38	92	51.136	ENSFALG00000014804	RPP38	94	51.254	Ficedula_albicollis
ENSUMAG00000012382	RPP38	100	79.649	ENSFDAG00000018669	RPP38	100	78.947	Fukomys_damarensis
ENSUMAG00000012382	RPP38	95	42.606	ENSFHEG00000013741	rpp38	100	44.147	Fundulus_heteroclitus
ENSUMAG00000012382	RPP38	92	51.504	ENSGALG00000008794	RPP38	92	51.449	Gallus_gallus
ENSUMAG00000012382	RPP38	59	47.619	ENSGACG00000009258	rpp38	98	46.386	Gasterosteus_aculeatus
ENSUMAG00000012382	RPP38	94	43.416	ENSHBUG00000010937	rpp38	97	44.404	Haplochromis_burtoni
ENSUMAG00000012382	RPP38	100	76.842	ENSHGLG00000012144	RPP38	100	76.491	Heterocephalus_glaber_female
ENSUMAG00000012382	RPP38	88	41.365	ENSIPUG00000022879	rpp38	95	41.045	Ictalurus_punctatus
ENSUMAG00000012382	RPP38	100	78.169	ENSSTOG00000025699	RPP38	98	77.465	Ictidomys_tridecemlineatus
ENSUMAG00000012382	RPP38	100	75.874	ENSJJAG00000007523	Rpp38	100	74.825	Jaculus_jaculus
ENSUMAG00000012382	RPP38	88	42.023	ENSKMAG00000003986	rpp38	93	41.993	Kryptolebias_marmoratus
ENSUMAG00000012382	RPP38	92	45.660	ENSLBEG00000006853	rpp38	94	45.660	Labrus_bergylta
ENSUMAG00000012382	RPP38	95	49.826	ENSLACG00000006502	RPP38	100	50.166	Latimeria_chalumnae
ENSUMAG00000012382	RPP38	94	49.638	ENSLOCG00000018347	rpp38	96	49.123	Lepisosteus_oculatus
ENSUMAG00000012382	RPP38	100	81.053	ENSLAFG00000000509	RPP38	100	80.351	Loxodonta_africana
ENSUMAG00000012382	RPP38	94	78.947	ENSMMUG00000007679	RPP38	100	77.465	Macaca_mulatta
ENSUMAG00000012382	RPP38	96	44.561	ENSMAMG00000012774	rpp38	96	44.286	Mastacembelus_armatus
ENSUMAG00000012382	RPP38	94	43.772	ENSMZEG00005003189	rpp38	97	44.765	Maylandia_zebra
ENSUMAG00000012382	RPP38	94	43.772	ENSMZEG00005003200	rpp38	97	44.404	Maylandia_zebra
ENSUMAG00000012382	RPP38	92	51.698	ENSMGAG00000008217	RPP38	92	50.545	Meleagris_gallopavo
ENSUMAG00000012382	RPP38	100	72.727	ENSMAUG00000003644	Rpp38	100	72.727	Mesocricetus_auratus
ENSUMAG00000012382	RPP38	100	74.126	ENSMOCG00000007020	Rpp38	100	73.427	Microtus_ochrogaster
ENSUMAG00000012382	RPP38	93	41.606	ENSMMOG00000003446	rpp38	94	42.182	Mola_mola
ENSUMAG00000012382	RPP38	95	67.279	ENSMODG00000024091	RPP38	100	66.434	Monodelphis_domestica
ENSUMAG00000012382	RPP38	91	42.424	ENSMALG00000002356	rpp38	93	42.205	Monopterus_albus
ENSUMAG00000012382	RPP38	100	73.776	MGP_CAROLIEiJ_G0023133	Rpp38	100	72.727	Mus_caroli
ENSUMAG00000012382	RPP38	100	72.727	ENSMUSG00000049950	Rpp38	100	71.678	Mus_musculus
ENSUMAG00000012382	RPP38	100	73.776	MGP_PahariEiJ_G0019193	Rpp38	100	72.727	Mus_pahari
ENSUMAG00000012382	RPP38	100	72.028	MGP_SPRETEiJ_G0024051	Rpp38	100	70.979	Mus_spretus
ENSUMAG00000012382	RPP38	99	92.171	ENSMPUG00000018523	RPP38	99	91.103	Mustela_putorius_furo
ENSUMAG00000012382	RPP38	94	83.019	ENSMLUG00000002153	RPP38	100	80.919	Myotis_lucifugus
ENSUMAG00000012382	RPP38	100	75.175	ENSNGAG00000011066	Rpp38	100	74.476	Nannospalax_galili
ENSUMAG00000012382	RPP38	94	43.542	ENSNBRG00000006994	rpp38	98	44.803	Neolamprologus_brichardi
ENSUMAG00000012382	RPP38	94	45.487	ENSONIG00000020467	rpp38	96	45.878	Oreochromis_niloticus
ENSUMAG00000012382	RPP38	100	72.982	ENSOCUG00000024367	-	100	71.930	Oryctolagus_cuniculus
ENSUMAG00000012382	RPP38	100	72.982	ENSOCUG00000022768	-	100	71.930	Oryctolagus_cuniculus
ENSUMAG00000012382	RPP38	90	43.774	ENSORLG00000009219	rpp38	96	43.945	Oryzias_latipes
ENSUMAG00000012382	RPP38	89	44.361	ENSORLG00020011503	rpp38	90	44.118	Oryzias_latipes_hni
ENSUMAG00000012382	RPP38	89	43.511	ENSORLG00015017702	rpp38	93	41.554	Oryzias_latipes_hsok
ENSUMAG00000012382	RPP38	89	44.656	ENSOMEG00000005414	rpp38	99	44.983	Oryzias_melastigma
ENSUMAG00000012382	RPP38	100	78.521	ENSOGAG00000008059	RPP38	100	77.817	Otolemur_garnettii
ENSUMAG00000012382	RPP38	100	76.325	ENSOARG00000004534	RPP38	100	75.618	Ovis_aries
ENSUMAG00000012382	RPP38	100	78.873	ENSPPAG00000041577	RPP38	91	77.817	Pan_paniscus
ENSUMAG00000012382	RPP38	100	83.392	ENSPPRG00000015329	RPP38	100	82.686	Panthera_pardus
ENSUMAG00000012382	RPP38	100	83.039	ENSPTIG00000007188	RPP38	100	82.332	Panthera_tigris_altaica
ENSUMAG00000012382	RPP38	100	78.873	ENSPTRG00000002318	RPP38	91	77.817	Pan_troglodytes
ENSUMAG00000012382	RPP38	93	44.840	ENSPKIG00000025652	rpp38	93	44.014	Paramormyrops_kingsleyae
ENSUMAG00000012382	RPP38	97	55.357	ENSPSIG00000001527	RPP38	98	55.357	Pelodiscus_sinensis
ENSUMAG00000012382	RPP38	100	74.825	ENSPEMG00000008375	Rpp38	100	74.825	Peromyscus_maniculatus_bairdii
ENSUMAG00000012382	RPP38	100	69.930	ENSPCIG00000009096	RPP38	94	68.881	Phascolarctos_cinereus
ENSUMAG00000012382	RPP38	68	45.408	ENSPFOG00000016823	rpp38	91	45.408	Poecilia_formosa
ENSUMAG00000012382	RPP38	89	42.586	ENSPLAG00000007626	rpp38	91	43.182	Poecilia_latipinna
ENSUMAG00000012382	RPP38	87	38.372	ENSPMEG00000020392	rpp38	93	39.630	Poecilia_mexicana
ENSUMAG00000012382	RPP38	96	41.754	ENSPREG00000017744	rpp38	97	42.308	Poecilia_reticulata
ENSUMAG00000012382	RPP38	100	79.577	ENSPPYG00000002113	RPP38	100	78.521	Pongo_abelii
ENSUMAG00000012382	RPP38	94	83.774	ENSPVAG00000007155	RPP38	100	81.625	Pteropus_vampyrus
ENSUMAG00000012382	RPP38	94	43.772	ENSPNYG00000004293	rpp38	97	44.765	Pundamilia_nyererei
ENSUMAG00000012382	RPP38	89	41.085	ENSPNAG00000010633	rpp38	99	42.652	Pygocentrus_nattereri
ENSUMAG00000012382	RPP38	98	70.714	ENSRNOG00000038025	Rpp38	99	70.714	Rattus_norvegicus
ENSUMAG00000012382	RPP38	100	69.580	ENSSHAG00000015529	RPP38	100	69.580	Sarcophilus_harrisii
ENSUMAG00000012382	RPP38	94	44.245	ENSSMAG00000018276	rpp38	95	43.885	Scophthalmus_maximus
ENSUMAG00000012382	RPP38	94	42.806	ENSSDUG00000001651	rpp38	98	44.128	Seriola_dumerili
ENSUMAG00000012382	RPP38	94	42.349	ENSSLDG00000014355	rpp38	98	43.772	Seriola_lalandi_dorsalis
ENSUMAG00000012382	RPP38	100	57.597	ENSSARG00000012099	RPP38	100	56.890	Sorex_araneus
ENSUMAG00000012382	RPP38	99	57.143	ENSSPUG00000018363	-	99	56.446	Sphenodon_punctatus
ENSUMAG00000012382	RPP38	96	54.152	ENSSPUG00000008560	-	97	52.482	Sphenodon_punctatus
ENSUMAG00000012382	RPP38	100	57.439	ENSSPUG00000005237	-	100	56.747	Sphenodon_punctatus
ENSUMAG00000012382	RPP38	94	43.066	ENSSPAG00000020387	rpp38	96	43.369	Stegastes_partitus
ENSUMAG00000012382	RPP38	100	75.175	ENSSSCG00000027110	RPP38	100	74.825	Sus_scrofa
ENSUMAG00000012382	RPP38	92	51.136	ENSTGUG00000001366	RPP38	97	50.725	Taeniopygia_guttata
ENSUMAG00000012382	RPP38	94	44.727	ENSTNIG00000001334	rpp38	96	43.636	Tetraodon_nigroviridis
ENSUMAG00000012382	RPP38	100	74.205	ENSTTRG00000004420	RPP38	100	73.145	Tursiops_truncatus
ENSUMAG00000012382	RPP38	100	97.880	ENSUAMG00000002618	RPP38	100	97.880	Ursus_americanus
ENSUMAG00000012382	RPP38	100	89.046	ENSVVUG00000005272	RPP38	100	87.986	Vulpes_vulpes
ENSUMAG00000012382	RPP38	92	49.248	ENSXETG00000003419	rpp38	95	49.630	Xenopus_tropicalis