EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000012385 (Gene tree)
Gene ID: 103671533
Gene Symbol: SNRNP200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 28732 bases
Position: chrKK498653.1:43532017-43560748
Accession: 103671533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000017729	ResIII	PF04851.15	7.5e-26	1	2
ENSUMAP00000017729	ResIII	PF04851.15	7.5e-26	2	2
ENSUMAP00000017729	DEAD	PF00270.29	4.3e-52	1	2
ENSUMAP00000017729	DEAD	PF00270.29	4.3e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000020999	SNRNP200-203	1830	-	ENSUMAP00000017772	609 (aa)	-	-
ENSUMAT00000020945	SNRNP200-202	1389	-	ENSUMAP00000017734	462 (aa)	-	-
ENSUMAT00000020940	SNRNP200-201	6411	XM_008700180	ENSUMAP00000017729	2136 (aa)	XP_008698402	UPI000298FC9F

Gene Model

Click here to download ENSUMAG00000012385's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000012385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000012385	SNRNP200	86	41.859	ENSUMAG00000021200	ASCC3	80	43.915

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000012385	SNRNP200	100	99.906	ENSG00000144028	SNRNP200	100	99.906	Homo_sapiens
ENSUMAG00000012385	SNRNP200	99	90.982	ENSAPOG00000010223	snrnp200	99	90.871	Acanthochromis_polyacanthus
ENSUMAG00000012385	SNRNP200	100	99.953	ENSAMEG00000008996	SNRNP200	100	99.953	Ailuropoda_melanoleuca
ENSUMAG00000012385	SNRNP200	97	90.310	ENSACIG00000001764	snrnp200	98	90.310	Amphilophus_citrinellus
ENSUMAG00000012385	SNRNP200	99	90.888	ENSAOCG00000024593	snrnp200	100	90.096	Amphiprion_ocellaris
ENSUMAG00000012385	SNRNP200	97	90.150	ENSAPEG00000012554	snrnp200	100	90.150	Amphiprion_percula
ENSUMAG00000012385	SNRNP200	99	90.747	ENSATEG00000022522	snrnp200	99	90.637	Anabas_testudineus
ENSUMAG00000012385	SNRNP200	99	97.784	ENSAPLG00000004313	SNRNP200	100	97.784	Anas_platyrhynchos
ENSUMAG00000012385	SNRNP200	99	97.555	ENSACAG00000000434	SNRNP200	100	97.555	Anolis_carolinensis
ENSUMAG00000012385	SNRNP200	100	95.336	ENSANAG00000036625	SNRNP200	100	95.756	Aotus_nancymaae
ENSUMAG00000012385	SNRNP200	99	90.606	ENSACLG00000011188	snrnp200	99	90.496	Astatotilapia_calliptera
ENSUMAG00000012385	SNRNP200	99	90.700	ENSAMXG00000005684	snrnp200	99	90.590	Astyanax_mexicanus
ENSUMAG00000012385	SNRNP200	100	99.391	ENSBTAG00000000848	SNRNP200	100	99.391	Bos_taurus
ENSUMAG00000012385	SNRNP200	100	99.860	ENSCJAG00000007514	SNRNP200	100	99.860	Callithrix_jacchus
ENSUMAG00000012385	SNRNP200	100	99.160	ENSCAFG00020019979	SNRNP200	100	100.000	Canis_lupus_dingo
ENSUMAG00000012385	SNRNP200	100	99.579	ENSCHIG00000020611	SNRNP200	100	99.579	Capra_hircus
ENSUMAG00000012385	SNRNP200	100	99.906	ENSTSYG00000010467	SNRNP200	100	99.906	Carlito_syrichta
ENSUMAG00000012385	SNRNP200	99	99.436	ENSCAPG00000017234	SNRNP200	99	99.436	Cavia_aperea
ENSUMAG00000012385	SNRNP200	100	99.719	ENSCPOG00000006776	SNRNP200	100	99.719	Cavia_porcellus
ENSUMAG00000012385	SNRNP200	100	99.860	ENSCCAG00000033962	SNRNP200	100	99.860	Cebus_capucinus
ENSUMAG00000012385	SNRNP200	100	99.906	ENSCATG00000015790	SNRNP200	100	99.906	Cercocebus_atys
ENSUMAG00000012385	SNRNP200	100	99.579	ENSCLAG00000004116	SNRNP200	100	99.579	Chinchilla_lanigera
ENSUMAG00000012385	SNRNP200	100	99.860	ENSCSAG00000017369	SNRNP200	100	99.860	Chlorocebus_sabaeus
ENSUMAG00000012385	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSUMAG00000012385	SNRNP200	100	97.849	ENSCPBG00000022571	SNRNP200	100	97.849	Chrysemys_picta_bellii
ENSUMAG00000012385	SNRNP200	99	76.600	ENSCING00000005082	-	99	76.740	Ciona_intestinalis
ENSUMAG00000012385	SNRNP200	100	94.395	ENSCANG00000033932	SNRNP200	100	99.851	Colobus_angolensis_palliatus
ENSUMAG00000012385	SNRNP200	100	99.766	ENSCGRG00001022610	Snrnp200	100	99.766	Cricetulus_griseus_chok1gshd
ENSUMAG00000012385	SNRNP200	100	99.205	ENSCGRG00000016472	Snrnp200	100	99.205	Cricetulus_griseus_crigri
ENSUMAG00000012385	SNRNP200	100	89.981	ENSCSEG00000016399	snrnp200	100	89.981	Cynoglossus_semilaevis
ENSUMAG00000012385	SNRNP200	100	85.721	ENSCVAG00000017631	snrnp200	99	85.721	Cyprinodon_variegatus
ENSUMAG00000012385	SNRNP200	100	90.449	ENSDARG00000077536	snrnp200	99	90.449	Danio_rerio
ENSUMAG00000012385	SNRNP200	100	98.361	ENSDNOG00000011227	SNRNP200	100	98.361	Dasypus_novemcinctus
ENSUMAG00000012385	SNRNP200	100	97.148	ENSDORG00000005861	Snrnp200	100	97.148	Dipodomys_ordii
ENSUMAG00000012385	SNRNP200	100	74.348	FBgn0263599	l(3)72Ab	99	74.255	Drosophila_melanogaster
ENSUMAG00000012385	SNRNP200	95	99.742	ENSETEG00000000162	SNRNP200	74	99.742	Echinops_telfairi
ENSUMAG00000012385	SNRNP200	83	81.345	ENSEBUG00000016524	snrnp200	95	81.345	Eptatretus_burgeri
ENSUMAG00000012385	SNRNP200	100	98.834	ENSEASG00005001884	SNRNP200	100	98.834	Equus_asinus_asinus
ENSUMAG00000012385	SNRNP200	100	99.953	ENSECAG00000019675	SNRNP200	100	99.953	Equus_caballus
ENSUMAG00000012385	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSUMAG00000012385	SNRNP200	99	90.935	ENSELUG00000018948	snrnp200	99	90.824	Esox_lucius
ENSUMAG00000012385	SNRNP200	100	100.000	ENSFCAG00000010699	SNRNP200	100	100.000	Felis_catus
ENSUMAG00000012385	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSUMAG00000012385	SNRNP200	100	99.625	ENSFDAG00000004683	SNRNP200	100	99.625	Fukomys_damarensis
ENSUMAG00000012385	SNRNP200	100	87.875	ENSFHEG00000003786	snrnp200	99	87.875	Fundulus_heteroclitus
ENSUMAG00000012385	SNRNP200	100	89.766	ENSGMOG00000004881	snrnp200	99	89.720	Gadus_morhua
ENSUMAG00000012385	SNRNP200	100	88.109	ENSGAFG00000010807	snrnp200	99	88.109	Gambusia_affinis
ENSUMAG00000012385	SNRNP200	100	90.098	ENSGACG00000011474	snrnp200	99	90.005	Gasterosteus_aculeatus
ENSUMAG00000012385	SNRNP200	95	97.789	ENSGAGG00000016069	SNRNP200	99	97.789	Gopherus_agassizii
ENSUMAG00000012385	SNRNP200	100	99.906	ENSGGOG00000005174	SNRNP200	100	99.906	Gorilla_gorilla
ENSUMAG00000012385	SNRNP200	97	87.834	ENSHBUG00000011322	snrnp200	99	87.880	Haplochromis_burtoni
ENSUMAG00000012385	SNRNP200	100	99.719	ENSHGLG00000006654	SNRNP200	100	99.719	Heterocephalus_glaber_female
ENSUMAG00000012385	SNRNP200	100	99.719	ENSHGLG00100018594	SNRNP200	100	99.719	Heterocephalus_glaber_male
ENSUMAG00000012385	SNRNP200	100	99.860	ENSSTOG00000016351	SNRNP200	100	99.860	Ictidomys_tridecemlineatus
ENSUMAG00000012385	SNRNP200	100	99.672	ENSJJAG00000023659	Snrnp200	100	99.672	Jaculus_jaculus
ENSUMAG00000012385	SNRNP200	100	87.634	ENSKMAG00000003665	snrnp200	99	87.634	Kryptolebias_marmoratus
ENSUMAG00000012385	SNRNP200	100	90.356	ENSLBEG00000021585	snrnp200	99	90.356	Labrus_bergylta
ENSUMAG00000012385	SNRNP200	82	94.836	ENSLACG00000000226	SNRNP200	99	94.836	Latimeria_chalumnae
ENSUMAG00000012385	SNRNP200	100	92.275	ENSLOCG00000015198	snrnp200	99	92.275	Lepisosteus_oculatus
ENSUMAG00000012385	SNRNP200	100	99.579	ENSLAFG00000015626	SNRNP200	100	99.579	Loxodonta_africana
ENSUMAG00000012385	SNRNP200	100	99.860	ENSMFAG00000040174	SNRNP200	100	99.860	Macaca_fascicularis
ENSUMAG00000012385	SNRNP200	100	99.860	ENSMMUG00000023261	SNRNP200	100	99.860	Macaca_mulatta
ENSUMAG00000012385	SNRNP200	100	99.813	ENSMNEG00000032398	SNRNP200	100	99.813	Macaca_nemestrina
ENSUMAG00000012385	SNRNP200	100	99.906	ENSMLEG00000019083	SNRNP200	100	99.906	Mandrillus_leucophaeus
ENSUMAG00000012385	SNRNP200	100	90.314	ENSMAMG00000007851	snrnp200	99	90.267	Mastacembelus_armatus
ENSUMAG00000012385	SNRNP200	97	87.834	ENSMZEG00005010787	snrnp200	99	87.880	Maylandia_zebra
ENSUMAG00000012385	SNRNP200	97	97.339	ENSMGAG00000001831	SNRNP200	100	97.339	Meleagris_gallopavo
ENSUMAG00000012385	SNRNP200	100	99.813	ENSMAUG00000011825	Snrnp200	100	99.813	Mesocricetus_auratus
ENSUMAG00000012385	SNRNP200	100	99.860	ENSMICG00000004710	SNRNP200	100	99.860	Microcebus_murinus
ENSUMAG00000012385	SNRNP200	100	97.238	ENSMOCG00000011814	Snrnp200	100	97.238	Microtus_ochrogaster
ENSUMAG00000012385	SNRNP200	99	89.103	ENSMMOG00000014167	snrnp200	99	88.998	Mola_mola
ENSUMAG00000012385	SNRNP200	100	99.064	ENSMODG00000008475	SNRNP200	100	99.064	Monodelphis_domestica
ENSUMAG00000012385	SNRNP200	99	90.888	ENSMALG00000001973	snrnp200	99	90.777	Monopterus_albus
ENSUMAG00000012385	SNRNP200	100	99.625	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.625	Mus_caroli
ENSUMAG00000012385	SNRNP200	100	99.672	ENSMUSG00000003660	Snrnp200	100	99.672	Mus_musculus
ENSUMAG00000012385	SNRNP200	100	99.719	MGP_PahariEiJ_G0025695	Snrnp200	100	99.719	Mus_pahari
ENSUMAG00000012385	SNRNP200	100	99.672	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.672	Mus_spretus
ENSUMAG00000012385	SNRNP200	100	99.906	ENSMPUG00000008949	SNRNP200	100	99.906	Mustela_putorius_furo
ENSUMAG00000012385	SNRNP200	100	95.552	ENSMLUG00000027511	-	100	95.552	Myotis_lucifugus
ENSUMAG00000012385	SNRNP200	100	99.252	ENSMLUG00000010493	SNRNP200	100	99.252	Myotis_lucifugus
ENSUMAG00000012385	SNRNP200	100	99.906	ENSNGAG00000021993	Snrnp200	100	99.906	Nannospalax_galili
ENSUMAG00000012385	SNRNP200	90	90.377	ENSNBRG00000017960	snrnp200	98	90.377	Neolamprologus_brichardi
ENSUMAG00000012385	SNRNP200	100	95.258	ENSNLEG00000000025	SNRNP200	100	95.593	Nomascus_leucogenys
ENSUMAG00000012385	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSUMAG00000012385	SNRNP200	100	95.974	ENSOPRG00000015464	SNRNP200	100	95.974	Ochotona_princeps
ENSUMAG00000012385	SNRNP200	100	99.579	ENSODEG00000008366	SNRNP200	100	99.579	Octodon_degus
ENSUMAG00000012385	SNRNP200	99	90.606	ENSONIG00000010714	snrnp200	99	90.496	Oreochromis_niloticus
ENSUMAG00000012385	SNRNP200	100	99.766	ENSOCUG00000009864	SNRNP200	100	99.766	Oryctolagus_cuniculus
ENSUMAG00000012385	SNRNP200	100	90.309	ENSORLG00000012286	snrnp200	100	90.309	Oryzias_latipes
ENSUMAG00000012385	SNRNP200	100	90.356	ENSORLG00020004648	snrnp200	100	90.356	Oryzias_latipes_hni
ENSUMAG00000012385	SNRNP200	100	90.309	ENSORLG00015019114	snrnp200	100	90.339	Oryzias_latipes_hsok
ENSUMAG00000012385	SNRNP200	99	90.559	ENSOMEG00000011834	snrnp200	99	90.449	Oryzias_melastigma
ENSUMAG00000012385	SNRNP200	100	99.906	ENSOGAG00000006879	SNRNP200	100	99.906	Otolemur_garnettii
ENSUMAG00000012385	SNRNP200	100	98.549	ENSOARG00000013949	SNRNP200	100	98.549	Ovis_aries
ENSUMAG00000012385	SNRNP200	100	99.906	ENSPPAG00000041559	SNRNP200	100	99.906	Pan_paniscus
ENSUMAG00000012385	SNRNP200	100	100.000	ENSPPRG00000004435	SNRNP200	100	100.000	Panthera_pardus
ENSUMAG00000012385	SNRNP200	100	99.532	ENSPTIG00000006380	SNRNP200	100	99.532	Panthera_tigris_altaica
ENSUMAG00000012385	SNRNP200	100	99.906	ENSPTRG00000012230	SNRNP200	100	99.906	Pan_troglodytes
ENSUMAG00000012385	SNRNP200	100	99.860	ENSPANG00000006017	SNRNP200	100	99.860	Papio_anubis
ENSUMAG00000012385	SNRNP200	100	91.199	ENSPKIG00000014762	snrnp200	99	91.199	Paramormyrops_kingsleyae
ENSUMAG00000012385	SNRNP200	100	96.818	ENSPSIG00000008580	SNRNP200	100	96.818	Pelodiscus_sinensis
ENSUMAG00000012385	SNRNP200	100	99.064	ENSPCIG00000023050	SNRNP200	100	99.064	Phascolarctos_cinereus
ENSUMAG00000012385	SNRNP200	100	90.454	ENSPFOG00000015110	snrnp200	99	90.454	Poecilia_formosa
ENSUMAG00000012385	SNRNP200	97	90.275	ENSPLAG00000006711	snrnp200	99	90.275	Poecilia_latipinna
ENSUMAG00000012385	SNRNP200	97	90.220	ENSPMEG00000021166	snrnp200	99	90.220	Poecilia_mexicana
ENSUMAG00000012385	SNRNP200	100	90.543	ENSPREG00000008875	snrnp200	99	90.543	Poecilia_reticulata
ENSUMAG00000012385	SNRNP200	100	99.906	ENSPPYG00000012068	SNRNP200	100	99.906	Pongo_abelii
ENSUMAG00000012385	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSUMAG00000012385	SNRNP200	100	99.906	ENSPCOG00000024608	SNRNP200	100	99.906	Propithecus_coquereli
ENSUMAG00000012385	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSUMAG00000012385	SNRNP200	99	86.089	ENSPNYG00000017476	snrnp200	99	85.994	Pundamilia_nyererei
ENSUMAG00000012385	SNRNP200	100	86.189	ENSPNAG00000010998	snrnp200	99	86.189	Pygocentrus_nattereri
ENSUMAG00000012385	SNRNP200	100	99.813	ENSRNOG00000012157	Snrnp200	100	99.813	Rattus_norvegicus
ENSUMAG00000012385	SNRNP200	100	99.906	ENSRBIG00000044690	-	100	99.906	Rhinopithecus_bieti
ENSUMAG00000012385	SNRNP200	100	99.906	ENSRROG00000037952	-	100	99.906	Rhinopithecus_roxellana
ENSUMAG00000012385	SNRNP200	100	99.860	ENSSBOG00000035471	SNRNP200	100	99.860	Saimiri_boliviensis_boliviensis
ENSUMAG00000012385	SNRNP200	97	98.984	ENSSHAG00000000758	SNRNP200	100	98.984	Sarcophilus_harrisii
ENSUMAG00000012385	SNRNP200	99	91.639	ENSSFOG00015018826	snrnp200	99	91.526	Scleropages_formosus
ENSUMAG00000012385	SNRNP200	99	90.559	ENSSMAG00000005463	snrnp200	99	90.449	Scophthalmus_maximus
ENSUMAG00000012385	SNRNP200	99	90.841	ENSSDUG00000021410	snrnp200	99	90.730	Seriola_dumerili
ENSUMAG00000012385	SNRNP200	99	90.794	ENSSLDG00000010884	snrnp200	99	90.684	Seriola_lalandi_dorsalis
ENSUMAG00000012385	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSUMAG00000012385	SNRNP200	100	97.612	ENSSPUG00000003726	-	100	97.612	Sphenodon_punctatus
ENSUMAG00000012385	SNRNP200	99	90.888	ENSSPAG00000001842	snrnp200	99	90.777	Stegastes_partitus
ENSUMAG00000012385	SNRNP200	100	99.813	ENSSSCG00000008127	SNRNP200	100	99.813	Sus_scrofa
ENSUMAG00000012385	SNRNP200	99	88.037	ENSTGUG00000014475	-	100	88.037	Taeniopygia_guttata
ENSUMAG00000012385	SNRNP200	99	90.512	ENSTRUG00000001307	snrnp200	99	90.403	Takifugu_rubripes
ENSUMAG00000012385	SNRNP200	100	85.992	ENSTNIG00000004320	snrnp200	100	85.992	Tetraodon_nigroviridis
ENSUMAG00000012385	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSUMAG00000012385	SNRNP200	100	99.625	ENSTTRG00000004983	SNRNP200	100	99.625	Tursiops_truncatus
ENSUMAG00000012385	SNRNP200	75	93.023	ENSUAMG00000008395	-	95	93.023	Ursus_americanus
ENSUMAG00000012385	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSUMAG00000012385	SNRNP200	100	99.766	ENSVVUG00000026247	SNRNP200	100	99.766	Vulpes_vulpes
ENSUMAG00000012385	SNRNP200	100	94.437	ENSXETG00000001243	snrnp200	100	94.437	Xenopus_tropicalis
ENSUMAG00000012385	SNRNP200	97	90.525	ENSXMAG00000002058	snrnp200	98	90.525	Xiphophorus_maculatus