EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000012487 (Gene tree)
Gene ID: 103673458
Gene Symbol: RPUSD2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 4097 bases
Position: chrKK498675.1:3485165-3489261
Accession: 103673458
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000017020	PseudoU_synth_2	PF00849.22	1.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000020115	RPUSD2-201	1952	-	ENSUMAP00000017020	620 (aa)	XP_008700471	UPI0004E013D1

Gene Model

Click here to download ENSUMAG00000012487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000012487's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000012487	RPUSD2	88	84.220	ENSG00000166133	RPUSD2	100	84.220	Homo_sapiens
ENSUMAG00000012487	RPUSD2	70	58.478	ENSAPOG00000000817	rpusd2	90	54.615	Acanthochromis_polyacanthus
ENSUMAG00000012487	RPUSD2	88	97.798	ENSAMEG00000016996	RPUSD2	100	97.798	Ailuropoda_melanoleuca
ENSUMAG00000012487	RPUSD2	70	59.955	ENSACIG00000024029	rpusd2	93	57.783	Amphilophus_citrinellus
ENSUMAG00000012487	RPUSD2	77	54.034	ENSAOCG00000015237	rpusd2	90	54.580	Amphiprion_ocellaris
ENSUMAG00000012487	RPUSD2	77	53.846	ENSAPEG00000021763	rpusd2	90	54.389	Amphiprion_percula
ENSUMAG00000012487	RPUSD2	70	56.900	ENSATEG00000015242	rpusd2	88	53.728	Anabas_testudineus
ENSUMAG00000012487	RPUSD2	68	65.721	ENSAPLG00000004723	RPUSD2	100	65.094	Anas_platyrhynchos
ENSUMAG00000012487	RPUSD2	70	66.742	ENSACAG00000013893	RPUSD2	96	64.731	Anolis_carolinensis
ENSUMAG00000012487	RPUSD2	88	84.771	ENSANAG00000009691	RPUSD2	100	84.771	Aotus_nancymaae
ENSUMAG00000012487	RPUSD2	70	57.826	ENSACLG00000019531	rpusd2	93	51.175	Astatotilapia_calliptera
ENSUMAG00000012487	RPUSD2	71	57.526	ENSAMXG00000013376	rpusd2	85	56.226	Astyanax_mexicanus
ENSUMAG00000012487	RPUSD2	88	84.211	ENSBTAG00000003193	RPUSD2	99	84.211	Bos_taurus
ENSUMAG00000012487	RPUSD2	65	35.484	WBGene00019498	K07E8.7	97	34.739	Caenorhabditis_elegans
ENSUMAG00000012487	RPUSD2	88	83.486	ENSCJAG00000020841	RPUSD2	100	83.486	Callithrix_jacchus
ENSUMAG00000012487	RPUSD2	88	91.848	ENSCAFG00000009165	RPUSD2	100	91.848	Canis_familiaris
ENSUMAG00000012487	RPUSD2	88	91.848	ENSCAFG00020005849	RPUSD2	100	91.848	Canis_lupus_dingo
ENSUMAG00000012487	RPUSD2	88	84.211	ENSCHIG00000006152	RPUSD2	99	84.211	Capra_hircus
ENSUMAG00000012487	RPUSD2	88	84.404	ENSTSYG00000012844	RPUSD2	100	84.404	Carlito_syrichta
ENSUMAG00000012487	RPUSD2	88	81.835	ENSCPOG00000013201	RPUSD2	100	81.835	Cavia_porcellus
ENSUMAG00000012487	RPUSD2	88	83.853	ENSCCAG00000024378	RPUSD2	100	83.853	Cebus_capucinus
ENSUMAG00000012487	RPUSD2	88	84.954	ENSCATG00000043734	RPUSD2	100	84.954	Cercocebus_atys
ENSUMAG00000012487	RPUSD2	88	83.670	ENSCLAG00000011862	RPUSD2	100	83.670	Chinchilla_lanigera
ENSUMAG00000012487	RPUSD2	82	86.888	ENSCSAG00000007538	RPUSD2	100	86.888	Chlorocebus_sabaeus
ENSUMAG00000012487	RPUSD2	64	89.213	ENSCHOG00000004834	RPUSD2	63	89.213	Choloepus_hoffmanni
ENSUMAG00000012487	RPUSD2	78	60.853	ENSCPBG00000013419	RPUSD2	95	60.853	Chrysemys_picta_bellii
ENSUMAG00000012487	RPUSD2	88	85.505	ENSCANG00000003659	RPUSD2	100	85.505	Colobus_angolensis_palliatus
ENSUMAG00000012487	RPUSD2	88	77.005	ENSCGRG00001009839	Rpusd2	98	77.005	Cricetulus_griseus_chok1gshd
ENSUMAG00000012487	RPUSD2	88	77.061	ENSCGRG00000012348	Rpusd2	100	77.061	Cricetulus_griseus_crigri
ENSUMAG00000012487	RPUSD2	74	55.439	ENSCSEG00000001953	rpusd2	83	55.439	Cynoglossus_semilaevis
ENSUMAG00000012487	RPUSD2	70	60.586	ENSCVAG00000010848	rpusd2	84	58.723	Cyprinodon_variegatus
ENSUMAG00000012487	RPUSD2	71	58.515	ENSDARG00000060992	rpusd2	86	55.118	Danio_rerio
ENSUMAG00000012487	RPUSD2	88	80.367	ENSDNOG00000047745	RPUSD2	100	80.367	Dasypus_novemcinctus
ENSUMAG00000012487	RPUSD2	70	88.506	ENSDORG00000009092	Rpusd2	100	88.506	Dipodomys_ordii
ENSUMAG00000012487	RPUSD2	76	45.661	FBgn0032256	RluA-2	86	45.661	Drosophila_melanogaster
ENSUMAG00000012487	RPUSD2	69	47.872	FBgn0051719	RluA-1	63	47.872	Drosophila_melanogaster
ENSUMAG00000012487	RPUSD2	88	78.532	ENSETEG00000008581	RPUSD2	100	78.532	Echinops_telfairi
ENSUMAG00000012487	RPUSD2	68	35.253	ENSEBUG00000012149	rpusd2	94	33.750	Eptatretus_burgeri
ENSUMAG00000012487	RPUSD2	88	86.306	ENSEASG00005016463	RPUSD2	99	86.306	Equus_asinus_asinus
ENSUMAG00000012487	RPUSD2	88	86.306	ENSECAG00000024178	RPUSD2	99	86.306	Equus_caballus
ENSUMAG00000012487	RPUSD2	88	70.588	ENSEEUG00000005132	RPUSD2	99	70.588	Erinaceus_europaeus
ENSUMAG00000012487	RPUSD2	82	53.296	ENSELUG00000016786	rpusd2	94	53.296	Esox_lucius
ENSUMAG00000012487	RPUSD2	88	91.667	ENSFCAG00000040796	RPUSD2	100	91.667	Felis_catus
ENSUMAG00000012487	RPUSD2	69	69.388	ENSFALG00000001122	RPUSD2	96	69.556	Ficedula_albicollis
ENSUMAG00000012487	RPUSD2	82	82.779	ENSFDAG00000003070	RPUSD2	100	82.779	Fukomys_damarensis
ENSUMAG00000012487	RPUSD2	73	57.692	ENSFHEG00000007518	rpusd2	85	57.692	Fundulus_heteroclitus
ENSUMAG00000012487	RPUSD2	74	56.327	ENSGMOG00000011014	rpusd2	99	56.442	Gadus_morhua
ENSUMAG00000012487	RPUSD2	74	65.136	ENSGALG00000041216	RPUSD2	97	65.136	Gallus_gallus
ENSUMAG00000012487	RPUSD2	76	56.757	ENSGAFG00000003390	rpusd2	86	56.757	Gambusia_affinis
ENSUMAG00000012487	RPUSD2	76	52.767	ENSGACG00000008656	rpusd2	95	52.767	Gasterosteus_aculeatus
ENSUMAG00000012487	RPUSD2	84	60.994	ENSGAGG00000013098	RPUSD2	97	60.994	Gopherus_agassizii
ENSUMAG00000012487	RPUSD2	88	83.853	ENSGGOG00000006684	RPUSD2	100	83.853	Gorilla_gorilla
ENSUMAG00000012487	RPUSD2	70	57.609	ENSHBUG00000023777	rpusd2	93	50.995	Haplochromis_burtoni
ENSUMAG00000012487	RPUSD2	88	81.284	ENSHGLG00000012765	RPUSD2	100	81.284	Heterocephalus_glaber_female
ENSUMAG00000012487	RPUSD2	88	81.284	ENSHGLG00100006653	RPUSD2	100	81.284	Heterocephalus_glaber_male
ENSUMAG00000012487	RPUSD2	75	55.489	ENSHCOG00000015587	rpusd2	86	55.489	Hippocampus_comes
ENSUMAG00000012487	RPUSD2	72	59.529	ENSIPUG00000021006	rpusd2	79	59.529	Ictalurus_punctatus
ENSUMAG00000012487	RPUSD2	88	83.002	ENSSTOG00000025619	RPUSD2	100	83.002	Ictidomys_tridecemlineatus
ENSUMAG00000012487	RPUSD2	88	78.611	ENSJJAG00000023160	Rpusd2	100	80.367	Jaculus_jaculus
ENSUMAG00000012487	RPUSD2	70	57.328	ENSKMAG00000006618	rpusd2	89	52.855	Kryptolebias_marmoratus
ENSUMAG00000012487	RPUSD2	70	57.205	ENSLBEG00000021571	rpusd2	91	52.471	Labrus_bergylta
ENSUMAG00000012487	RPUSD2	70	64.254	ENSLACG00000017338	RPUSD2	100	64.254	Latimeria_chalumnae
ENSUMAG00000012487	RPUSD2	71	62.217	ENSLOCG00000014755	rpusd2	92	61.135	Lepisosteus_oculatus
ENSUMAG00000012487	RPUSD2	87	83.240	ENSLAFG00000015588	RPUSD2	99	83.240	Loxodonta_africana
ENSUMAG00000012487	RPUSD2	88	85.321	ENSMFAG00000045062	RPUSD2	100	85.321	Macaca_fascicularis
ENSUMAG00000012487	RPUSD2	88	84.954	ENSMMUG00000001483	RPUSD2	100	84.954	Macaca_mulatta
ENSUMAG00000012487	RPUSD2	88	75.592	ENSMNEG00000041429	RPUSD2	100	75.592	Macaca_nemestrina
ENSUMAG00000012487	RPUSD2	68	92.128	ENSMLEG00000036551	RPUSD2	99	92.128	Mandrillus_leucophaeus
ENSUMAG00000012487	RPUSD2	70	56.067	ENSMAMG00000001077	rpusd2	84	54.054	Mastacembelus_armatus
ENSUMAG00000012487	RPUSD2	70	57.826	ENSMZEG00005006947	rpusd2	94	55.332	Maylandia_zebra
ENSUMAG00000012487	RPUSD2	74	67.031	ENSMGAG00000003058	RPUSD2	100	67.031	Meleagris_gallopavo
ENSUMAG00000012487	RPUSD2	88	78.495	ENSMAUG00000020467	Rpusd2	100	78.495	Mesocricetus_auratus
ENSUMAG00000012487	RPUSD2	88	85.321	ENSMICG00000028637	RPUSD2	100	85.321	Microcebus_murinus
ENSUMAG00000012487	RPUSD2	87	76.993	ENSMOCG00000020061	Rpusd2	99	76.993	Microtus_ochrogaster
ENSUMAG00000012487	RPUSD2	89	52.035	ENSMMOG00000012020	rpusd2	96	52.389	Mola_mola
ENSUMAG00000012487	RPUSD2	78	75.260	ENSMODG00000000300	RPUSD2	100	69.161	Monodelphis_domestica
ENSUMAG00000012487	RPUSD2	70	55.252	ENSMALG00000010024	rpusd2	85	53.592	Monopterus_albus
ENSUMAG00000012487	RPUSD2	88	77.419	MGP_CAROLIEiJ_G0024130	Rpusd2	100	77.419	Mus_caroli
ENSUMAG00000012487	RPUSD2	88	77.419	ENSMUSG00000027324	Rpusd2	100	77.419	Mus_musculus
ENSUMAG00000012487	RPUSD2	88	77.599	MGP_PahariEiJ_G0025573	Rpusd2	100	77.599	Mus_pahari
ENSUMAG00000012487	RPUSD2	88	77.658	MGP_SPRETEiJ_G0025046	Rpusd2	100	77.658	Mus_spretus
ENSUMAG00000012487	RPUSD2	88	92.391	ENSMPUG00000008517	RPUSD2	100	92.391	Mustela_putorius_furo
ENSUMAG00000012487	RPUSD2	83	89.474	ENSMLUG00000007971	RPUSD2	100	89.474	Myotis_lucifugus
ENSUMAG00000012487	RPUSD2	88	78.142	ENSNGAG00000014126	Rpusd2	100	78.142	Nannospalax_galili
ENSUMAG00000012487	RPUSD2	70	59.502	ENSNBRG00000010070	rpusd2	93	52.336	Neolamprologus_brichardi
ENSUMAG00000012487	RPUSD2	88	84.954	ENSNLEG00000035735	RPUSD2	100	84.954	Nomascus_leucogenys
ENSUMAG00000012487	RPUSD2	88	70.384	ENSMEUG00000008500	RPUSD2	100	70.384	Notamacropus_eugenii
ENSUMAG00000012487	RPUSD2	88	77.982	ENSOPRG00000014177	-	100	77.982	Ochotona_princeps
ENSUMAG00000012487	RPUSD2	85	85.687	ENSODEG00000017193	RPUSD2	98	85.687	Octodon_degus
ENSUMAG00000012487	RPUSD2	70	59.954	ENSONIG00000020102	rpusd2	91	58.553	Oreochromis_niloticus
ENSUMAG00000012487	RPUSD2	91	81.738	ENSOCUG00000015745	RPUSD2	100	81.738	Oryctolagus_cuniculus
ENSUMAG00000012487	RPUSD2	72	58.862	ENSORLG00000015516	rpusd2	83	58.862	Oryzias_latipes
ENSUMAG00000012487	RPUSD2	74	57.940	ENSORLG00020010533	rpusd2	84	57.940	Oryzias_latipes_hni
ENSUMAG00000012487	RPUSD2	72	59.300	ENSORLG00015009206	rpusd2	82	59.300	Oryzias_latipes_hsok
ENSUMAG00000012487	RPUSD2	75	55.852	ENSOMEG00000007355	rpusd2	85	53.065	Oryzias_melastigma
ENSUMAG00000012487	RPUSD2	84	85.797	ENSOGAG00000004867	RPUSD2	99	85.797	Otolemur_garnettii
ENSUMAG00000012487	RPUSD2	88	81.588	ENSOARG00000020235	RPUSD2	99	82.396	Ovis_aries
ENSUMAG00000012487	RPUSD2	88	84.587	ENSPPAG00000032874	RPUSD2	100	84.587	Pan_paniscus
ENSUMAG00000012487	RPUSD2	88	91.927	ENSPPRG00000010446	RPUSD2	100	91.927	Panthera_pardus
ENSUMAG00000012487	RPUSD2	88	92.110	ENSPTIG00000013316	RPUSD2	100	92.110	Panthera_tigris_altaica
ENSUMAG00000012487	RPUSD2	88	84.587	ENSPTRG00000006924	RPUSD2	100	84.587	Pan_troglodytes
ENSUMAG00000012487	RPUSD2	88	84.954	ENSPANG00000019339	RPUSD2	100	84.954	Papio_anubis
ENSUMAG00000012487	RPUSD2	71	53.922	ENSPKIG00000023017	rpusd2	83	51.439	Paramormyrops_kingsleyae
ENSUMAG00000012487	RPUSD2	55	64.672	ENSPSIG00000012680	RPUSD2	99	64.672	Pelodiscus_sinensis
ENSUMAG00000012487	RPUSD2	70	58.124	ENSPMGG00000018165	rpusd2	80	57.018	Periophthalmus_magnuspinnatus
ENSUMAG00000012487	RPUSD2	88	81.284	ENSPEMG00000012878	Rpusd2	99	81.284	Peromyscus_maniculatus_bairdii
ENSUMAG00000012487	RPUSD2	88	68.459	ENSPCIG00000023199	RPUSD2	100	68.459	Phascolarctos_cinereus
ENSUMAG00000012487	RPUSD2	80	54.224	ENSPFOG00000006829	rpusd2	90	54.224	Poecilia_formosa
ENSUMAG00000012487	RPUSD2	74	57.019	ENSPLAG00000022914	rpusd2	94	57.019	Poecilia_latipinna
ENSUMAG00000012487	RPUSD2	80	54.028	ENSPMEG00000009835	rpusd2	94	56.780	Poecilia_mexicana
ENSUMAG00000012487	RPUSD2	78	56.415	ENSPREG00000016441	rpusd2	85	56.415	Poecilia_reticulata
ENSUMAG00000012487	RPUSD2	88	85.321	ENSPPYG00000006355	RPUSD2	100	85.321	Pongo_abelii
ENSUMAG00000012487	RPUSD2	88	84.587	ENSPCOG00000028019	RPUSD2	100	84.587	Propithecus_coquereli
ENSUMAG00000012487	RPUSD2	88	87.339	ENSPVAG00000001837	RPUSD2	100	87.339	Pteropus_vampyrus
ENSUMAG00000012487	RPUSD2	70	59.453	ENSPNYG00000021507	rpusd2	93	56.723	Pundamilia_nyererei
ENSUMAG00000012487	RPUSD2	88	77.061	ENSRNOG00000010528	LOC100911166	100	77.061	Rattus_norvegicus
ENSUMAG00000012487	RPUSD2	88	77.061	ENSRNOG00000046797	Rpusd2	100	77.061	Rattus_norvegicus
ENSUMAG00000012487	RPUSD2	88	85.688	ENSRBIG00000030813	RPUSD2	100	85.688	Rhinopithecus_bieti
ENSUMAG00000012487	RPUSD2	88	85.505	ENSRROG00000026664	RPUSD2	100	85.505	Rhinopithecus_roxellana
ENSUMAG00000012487	RPUSD2	88	84.587	ENSSBOG00000035031	RPUSD2	100	84.587	Saimiri_boliviensis_boliviensis
ENSUMAG00000012487	RPUSD2	55	77.035	ENSSHAG00000015108	RPUSD2	91	77.035	Sarcophilus_harrisii
ENSUMAG00000012487	RPUSD2	69	70.122	ENSSFOG00015019057	rpusd2	70	64.815	Scleropages_formosus
ENSUMAG00000012487	RPUSD2	82	53.532	ENSSMAG00000000903	rpusd2	99	53.759	Scophthalmus_maximus
ENSUMAG00000012487	RPUSD2	80	52.505	ENSSDUG00000019139	rpusd2	88	52.486	Seriola_dumerili
ENSUMAG00000012487	RPUSD2	70	56.250	ENSSLDG00000005938	rpusd2	84	54.635	Seriola_lalandi_dorsalis
ENSUMAG00000012487	RPUSD2	78	86.214	ENSSARG00000002792	RPUSD2	89	86.214	Sorex_araneus
ENSUMAG00000012487	RPUSD2	81	59.885	ENSSPUG00000001206	RPUSD2	98	59.885	Sphenodon_punctatus
ENSUMAG00000012487	RPUSD2	78	53.131	ENSSPAG00000003578	rpusd2	91	53.107	Stegastes_partitus
ENSUMAG00000012487	RPUSD2	88	85.974	ENSSSCG00000036700	RPUSD2	99	85.974	Sus_scrofa
ENSUMAG00000012487	RPUSD2	70	57.204	ENSTRUG00000025880	rpusd2	98	53.905	Takifugu_rubripes
ENSUMAG00000012487	RPUSD2	70	58.444	ENSTNIG00000017329	rpusd2	95	56.108	Tetraodon_nigroviridis
ENSUMAG00000012487	RPUSD2	88	77.064	ENSTBEG00000007933	RPUSD2	100	77.064	Tupaia_belangeri
ENSUMAG00000012487	RPUSD2	88	86.606	ENSTTRG00000010585	RPUSD2	100	86.606	Tursiops_truncatus
ENSUMAG00000012487	RPUSD2	82	99.609	ENSUAMG00000001470	RPUSD2	100	99.609	Ursus_americanus
ENSUMAG00000012487	RPUSD2	88	86.789	ENSVPAG00000003844	RPUSD2	100	86.789	Vicugna_pacos
ENSUMAG00000012487	RPUSD2	88	90.942	ENSVVUG00000026590	RPUSD2	100	90.942	Vulpes_vulpes
ENSUMAG00000012487	RPUSD2	73	65.032	ENSXETG00000015973	rpusd2	99	65.032	Xenopus_tropicalis
ENSUMAG00000012487	RPUSD2	72	58.531	ENSXMAG00000021821	rpusd2	92	58.531	Xiphophorus_maculatus