EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000012801 (Gene tree)
Gene ID: 103671216
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 105062 bases
Position: chrKK498653.1:4726379-4831440
Accession: 103671216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000017437	PPR	PF01535.20	3.6e-29	1	6
ENSUMAP00000017437	PPR	PF01535.20	3.6e-29	2	6
ENSUMAP00000017437	PPR	PF01535.20	3.6e-29	3	6
ENSUMAP00000017437	PPR	PF01535.20	3.6e-29	4	6
ENSUMAP00000017437	PPR	PF01535.20	3.6e-29	5	6
ENSUMAP00000017437	PPR	PF01535.20	3.6e-29	6	6
ENSUMAP00000017479	PPR	PF01535.20	2.9e-28	1	6
ENSUMAP00000017479	PPR	PF01535.20	2.9e-28	2	6
ENSUMAP00000017479	PPR	PF01535.20	2.9e-28	3	6
ENSUMAP00000017479	PPR	PF01535.20	2.9e-28	4	6
ENSUMAP00000017479	PPR	PF01535.20	2.9e-28	5	6
ENSUMAP00000017479	PPR	PF01535.20	2.9e-28	6	6
ENSUMAP00000017454	PPR	PF01535.20	3e-27	1	6
ENSUMAP00000017454	PPR	PF01535.20	3e-27	2	6
ENSUMAP00000017454	PPR	PF01535.20	3e-27	3	6
ENSUMAP00000017454	PPR	PF01535.20	3e-27	4	6
ENSUMAP00000017454	PPR	PF01535.20	3e-27	5	6
ENSUMAP00000017454	PPR	PF01535.20	3e-27	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000020594	LRPPRC-201	4320	-	ENSUMAP00000017437	1395 (aa)	XP_008698036	UPI0004DFD1F0
ENSUMAT00000020612	LRPPRC-202	4110	-	ENSUMAP00000017454	1339 (aa)	-	-
ENSUMAT00000020637	LRPPRC-203	4197	-	ENSUMAP00000017479	1288 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000012801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000012801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000012801	LRPPRC	100	80.860	ENSG00000138095	LRPPRC	99	82.765	Homo_sapiens
ENSUMAG00000012801	LRPPRC	94	59.696	ENSAPLG00000008902	LRPPRC	99	60.349	Anas_platyrhynchos
ENSUMAG00000012801	LRPPRC	99	85.536	ENSBTAG00000016368	LRPPRC	99	85.536	Bos_taurus
ENSUMAG00000012801	LRPPRC	99	90.233	ENSCAFG00000002527	LRPPRC	99	89.670	Canis_familiaris
ENSUMAG00000012801	LRPPRC	99	89.181	ENSCAFG00020025995	LRPPRC	99	88.666	Canis_lupus_dingo
ENSUMAG00000012801	LRPPRC	96	84.721	ENSTSYG00000013197	LRPPRC	96	84.387	Carlito_syrichta
ENSUMAG00000012801	LRPPRC	99	63.488	ENSCPBG00000005446	LRPPRC	99	65.676	Chrysemys_picta_bellii
ENSUMAG00000012801	LRPPRC	73	33.368	FBgn0284256	bsf	68	33.367	Drosophila_melanogaster
ENSUMAG00000012801	LRPPRC	99	87.969	ENSEASG00005003715	LRPPRC	99	87.446	Equus_asinus_asinus
ENSUMAG00000012801	LRPPRC	98	87.601	ENSECAG00000023814	LRPPRC	95	87.601	Equus_caballus
ENSUMAG00000012801	LRPPRC	96	57.801	ENSGALG00000009967	LRPPRC	98	57.658	Gallus_gallus
ENSUMAG00000012801	LRPPRC	97	64.602	ENSGAGG00000020227	LRPPRC	97	64.275	Gopherus_agassizii
ENSUMAG00000012801	LRPPRC	100	81.558	ENSMLEG00000043673	LRPPRC	99	83.333	Mandrillus_leucophaeus
ENSUMAG00000012801	LRPPRC	96	59.416	ENSMGAG00000010201	LRPPRC	99	59.416	Meleagris_gallopavo
ENSUMAG00000012801	LRPPRC	100	76.881	MGP_CAROLIEiJ_G0021927	Lrpprc	100	76.631	Mus_caroli
ENSUMAG00000012801	LRPPRC	100	76.918	ENSMUSG00000024120	Lrpprc	100	76.918	Mus_musculus
ENSUMAG00000012801	LRPPRC	100	77.580	MGP_PahariEiJ_G0020917	Lrpprc	100	77.491	Mus_pahari
ENSUMAG00000012801	LRPPRC	100	76.989	MGP_SPRETEiJ_G0022843	Lrpprc	100	76.989	Mus_spretus
ENSUMAG00000012801	LRPPRC	81	80.000	ENSMEUG00000004430	-	84	80.000	Notamacropus_eugenii
ENSUMAG00000012801	LRPPRC	100	78.355	ENSPEMG00000022720	Lrpprc	100	78.136	Peromyscus_maniculatus_bairdii
ENSUMAG00000012801	LRPPRC	99	70.356	ENSPCIG00000006872	LRPPRC	99	69.187	Phascolarctos_cinereus
ENSUMAG00000012801	LRPPRC	99	85.000	ENSPCOG00000001309	LRPPRC	99	87.500	Propithecus_coquereli
ENSUMAG00000012801	LRPPRC	88	62.445	ENSSPUG00000005188	LRPPRC	99	61.133	Sphenodon_punctatus
ENSUMAG00000012801	LRPPRC	69	83.333	ENSTBEG00000011055	-	66	81.448	Tupaia_belangeri
ENSUMAG00000012801	LRPPRC	100	99.427	ENSUAMG00000022940	LRPPRC	100	99.427	Ursus_americanus
ENSUMAG00000012801	LRPPRC	99	88.805	ENSVVUG00000002339	LRPPRC	99	88.164	Vulpes_vulpes