EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000012902 (Gene tree)
Gene ID: 103671222
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 196590 bases
Position: chrKK498653.1:6072362-6268951
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000017578	S1	PF00575.23	2.8e-09	1	1
ENSUMAP00000017572	S1	PF00575.23	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000020751	SRBD1-201	3199	-	ENSUMAP00000017572	1006 (aa)	-	-
ENSUMAT00000020758	SRBD1-202	3091	-	ENSUMAP00000017578	970 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000012902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000012902's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000012902	SRBD1	98	90.462	ENSG00000068784	SRBD1	100	90.462	Homo_sapiens
ENSUMAG00000012902	SRBD1	98	51.224	ENSAPOG00000005103	si:ch211-117n7.8	83	58.137	Acanthochromis_polyacanthus
ENSUMAG00000012902	SRBD1	98	98.180	ENSAMEG00000005993	SRBD1	100	98.180	Ailuropoda_melanoleuca
ENSUMAG00000012902	SRBD1	82	58.126	ENSACIG00000009875	si:ch211-117n7.8	85	58.235	Amphilophus_citrinellus
ENSUMAG00000012902	SRBD1	83	57.643	ENSAOCG00000024718	si:ch211-117n7.8	85	58.110	Amphiprion_ocellaris
ENSUMAG00000012902	SRBD1	83	58.226	ENSAPEG00000002645	si:ch211-117n7.8	88	58.226	Amphiprion_percula
ENSUMAG00000012902	SRBD1	83	58.167	ENSATEG00000010844	si:ch211-117n7.8	84	58.167	Anabas_testudineus
ENSUMAG00000012902	SRBD1	98	71.000	ENSAPLG00000006313	SRBD1	100	71.000	Anas_platyrhynchos
ENSUMAG00000012902	SRBD1	98	90.462	ENSANAG00000025573	SRBD1	100	90.462	Aotus_nancymaae
ENSUMAG00000012902	SRBD1	97	51.163	ENSACLG00000024219	si:ch211-117n7.8	94	52.766	Astatotilapia_calliptera
ENSUMAG00000012902	SRBD1	85	60.393	ENSAMXG00000004294	SRBD1	93	56.813	Astyanax_mexicanus
ENSUMAG00000012902	SRBD1	100	88.350	ENSBTAG00000007508	SRBD1	100	89.126	Bos_taurus
ENSUMAG00000012902	SRBD1	98	90.060	ENSCJAG00000000727	SRBD1	100	90.060	Callithrix_jacchus
ENSUMAG00000012902	SRBD1	98	96.061	ENSCAFG00000002554	SRBD1	100	96.061	Canis_familiaris
ENSUMAG00000012902	SRBD1	98	92.929	ENSCAFG00020026284	SRBD1	99	94.737	Canis_lupus_dingo
ENSUMAG00000012902	SRBD1	100	90.128	ENSCHIG00000016535	SRBD1	100	90.918	Capra_hircus
ENSUMAG00000012902	SRBD1	98	91.683	ENSTSYG00000012797	SRBD1	100	91.683	Carlito_syrichta
ENSUMAG00000012902	SRBD1	98	90.131	ENSCPOG00000004773	SRBD1	100	90.131	Cavia_porcellus
ENSUMAG00000012902	SRBD1	98	91.165	ENSCCAG00000025589	SRBD1	100	91.165	Cebus_capucinus
ENSUMAG00000012902	SRBD1	98	91.265	ENSCATG00000039530	SRBD1	100	91.265	Cercocebus_atys
ENSUMAG00000012902	SRBD1	98	90.863	ENSCLAG00000008623	SRBD1	100	90.863	Chinchilla_lanigera
ENSUMAG00000012902	SRBD1	98	91.466	ENSCSAG00000013350	SRBD1	100	91.466	Chlorocebus_sabaeus
ENSUMAG00000012902	SRBD1	85	94.904	ENSCHOG00000003805	SRBD1	87	94.904	Choloepus_hoffmanni
ENSUMAG00000012902	SRBD1	98	74.067	ENSCPBG00000005677	SRBD1	100	74.067	Chrysemys_picta_bellii
ENSUMAG00000012902	SRBD1	78	42.748	ENSCING00000005950	-	99	42.748	Ciona_intestinalis
ENSUMAG00000012902	SRBD1	79	43.019	ENSCSAVG00000000861	-	99	43.019	Ciona_savignyi
ENSUMAG00000012902	SRBD1	98	91.046	ENSCANG00000016307	SRBD1	99	91.046	Colobus_angolensis_palliatus
ENSUMAG00000012902	SRBD1	98	85.872	ENSCGRG00001000513	Srbd1	100	85.872	Cricetulus_griseus_chok1gshd
ENSUMAG00000012902	SRBD1	98	85.872	ENSCGRG00000002283	Srbd1	100	85.872	Cricetulus_griseus_crigri
ENSUMAG00000012902	SRBD1	98	50.783	ENSCSEG00000000856	si:ch211-117n7.8	86	56.437	Cynoglossus_semilaevis
ENSUMAG00000012902	SRBD1	83	57.833	ENSCVAG00000020212	si:ch211-117n7.8	97	54.752	Cyprinodon_variegatus
ENSUMAG00000012902	SRBD1	98	91.592	ENSDNOG00000018686	SRBD1	100	91.592	Dasypus_novemcinctus
ENSUMAG00000012902	SRBD1	98	87.651	ENSDORG00000010468	Srbd1	100	87.651	Dipodomys_ordii
ENSUMAG00000012902	SRBD1	92	34.809	FBgn0051156	CG31156	98	35.010	Drosophila_melanogaster
ENSUMAG00000012902	SRBD1	88	83.601	ENSETEG00000000739	SRBD1	91	83.601	Echinops_telfairi
ENSUMAG00000012902	SRBD1	72	48.098	ENSEBUG00000008902	si:ch211-117n7.8	96	48.098	Eptatretus_burgeri
ENSUMAG00000012902	SRBD1	98	90.361	ENSEASG00005003132	SRBD1	97	95.541	Equus_asinus_asinus
ENSUMAG00000012902	SRBD1	100	93.781	ENSECAG00000013865	SRBD1	100	93.781	Equus_caballus
ENSUMAG00000012902	SRBD1	95	55.169	ENSELUG00000012592	si:ch211-117n7.8	91	55.169	Esox_lucius
ENSUMAG00000012902	SRBD1	98	95.884	ENSFCAG00000005101	SRBD1	100	95.884	Felis_catus
ENSUMAG00000012902	SRBD1	98	69.122	ENSFALG00000012966	SRBD1	100	68.819	Ficedula_albicollis
ENSUMAG00000012902	SRBD1	96	88.706	ENSFDAG00000016670	SRBD1	98	88.993	Fukomys_damarensis
ENSUMAG00000012902	SRBD1	83	58.068	ENSFHEG00000019480	si:ch211-117n7.8	82	58.068	Fundulus_heteroclitus
ENSUMAG00000012902	SRBD1	52	51.910	ENSGMOG00000018010	-	100	51.910	Gadus_morhua
ENSUMAG00000012902	SRBD1	98	70.700	ENSGALG00000009990	SRBD1	100	70.700	Gallus_gallus
ENSUMAG00000012902	SRBD1	83	57.126	ENSGAFG00000019664	si:ch211-117n7.8	97	52.073	Gambusia_affinis
ENSUMAG00000012902	SRBD1	62	61.600	ENSGACG00000010794	si:ch211-117n7.8	100	61.760	Gasterosteus_aculeatus
ENSUMAG00000012902	SRBD1	83	81.437	ENSGAGG00000006166	SRBD1	99	81.437	Gopherus_agassizii
ENSUMAG00000012902	SRBD1	96	90.609	ENSGGOG00000005910	SRBD1	99	90.541	Gorilla_gorilla
ENSUMAG00000012902	SRBD1	83	50.769	ENSHBUG00000013207	si:ch211-117n7.8	86	50.888	Haplochromis_burtoni
ENSUMAG00000012902	SRBD1	98	89.738	ENSHGLG00000018153	-	99	89.738	Heterocephalus_glaber_female
ENSUMAG00000012902	SRBD1	98	89.537	ENSHGLG00100015183	-	99	89.537	Heterocephalus_glaber_male
ENSUMAG00000012902	SRBD1	84	61.222	ENSIPUG00000009661	srbd1	97	56.282	Ictalurus_punctatus
ENSUMAG00000012902	SRBD1	98	91.466	ENSSTOG00000005898	SRBD1	100	91.466	Ictidomys_tridecemlineatus
ENSUMAG00000012902	SRBD1	98	80.962	ENSJJAG00000022244	Srbd1	100	80.962	Jaculus_jaculus
ENSUMAG00000012902	SRBD1	98	51.024	ENSKMAG00000003473	si:ch211-117n7.8	83	57.126	Kryptolebias_marmoratus
ENSUMAG00000012902	SRBD1	93	53.174	ENSLBEG00000027518	si:ch211-117n7.8	92	53.174	Labrus_bergylta
ENSUMAG00000012902	SRBD1	84	71.192	ENSLACG00000009790	SRBD1	100	71.192	Latimeria_chalumnae
ENSUMAG00000012902	SRBD1	98	57.522	ENSLOCG00000016360	si:ch211-117n7.8	99	57.522	Lepisosteus_oculatus
ENSUMAG00000012902	SRBD1	98	91.566	ENSMFAG00000042026	SRBD1	100	91.566	Macaca_fascicularis
ENSUMAG00000012902	SRBD1	98	91.265	ENSMMUG00000003490	SRBD1	100	91.265	Macaca_mulatta
ENSUMAG00000012902	SRBD1	98	88.855	ENSMNEG00000034701	SRBD1	100	88.855	Macaca_nemestrina
ENSUMAG00000012902	SRBD1	98	91.165	ENSMLEG00000000745	SRBD1	100	91.165	Mandrillus_leucophaeus
ENSUMAG00000012902	SRBD1	81	56.287	ENSMAMG00000021921	si:ch211-117n7.8	84	56.368	Mastacembelus_armatus
ENSUMAG00000012902	SRBD1	97	51.163	ENSMZEG00005027369	si:ch211-117n7.8	94	52.766	Maylandia_zebra
ENSUMAG00000012902	SRBD1	79	75.845	ENSMGAG00000010273	SRBD1	100	75.845	Meleagris_gallopavo
ENSUMAG00000012902	SRBD1	80	85.053	ENSMAUG00000013916	Srbd1	99	85.053	Mesocricetus_auratus
ENSUMAG00000012902	SRBD1	98	92.771	ENSMICG00000007835	SRBD1	100	92.771	Microcebus_murinus
ENSUMAG00000012902	SRBD1	98	83.936	ENSMOCG00000018716	Srbd1	100	83.936	Microtus_ochrogaster
ENSUMAG00000012902	SRBD1	86	54.505	ENSMMOG00000007507	si:ch211-117n7.8	92	54.505	Mola_mola
ENSUMAG00000012902	SRBD1	81	57.074	ENSMALG00000001562	si:ch211-117n7.8	83	56.958	Monopterus_albus
ENSUMAG00000012902	SRBD1	98	82.229	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.026	Mus_caroli
ENSUMAG00000012902	SRBD1	98	82.129	ENSMUSG00000024135	Srbd1	100	82.129	Mus_musculus
ENSUMAG00000012902	SRBD1	98	81.124	MGP_PahariEiJ_G0020924	Srbd1	100	81.124	Mus_pahari
ENSUMAG00000012902	SRBD1	98	82.329	MGP_SPRETEiJ_G0022850	Srbd1	100	82.329	Mus_spretus
ENSUMAG00000012902	SRBD1	98	89.257	ENSMLUG00000007039	SRBD1	100	89.257	Myotis_lucifugus
ENSUMAG00000012902	SRBD1	98	84.164	ENSNGAG00000011893	Srbd1	100	83.773	Nannospalax_galili
ENSUMAG00000012902	SRBD1	83	56.361	ENSNBRG00000012873	si:ch211-117n7.8	85	56.480	Neolamprologus_brichardi
ENSUMAG00000012902	SRBD1	98	90.562	ENSNLEG00000016877	SRBD1	100	90.562	Nomascus_leucogenys
ENSUMAG00000012902	SRBD1	98	86.707	ENSODEG00000012095	SRBD1	100	86.707	Octodon_degus
ENSUMAG00000012902	SRBD1	97	51.018	ENSONIG00000000945	si:ch211-117n7.8	99	58.343	Oreochromis_niloticus
ENSUMAG00000012902	SRBD1	98	92.563	ENSOCUG00000015385	SRBD1	100	92.563	Oryctolagus_cuniculus
ENSUMAG00000012902	SRBD1	83	54.824	ENSORLG00000004427	si:ch211-117n7.8	81	54.824	Oryzias_latipes
ENSUMAG00000012902	SRBD1	98	50.629	ENSORLG00020012792	si:ch211-117n7.8	82	57.697	Oryzias_latipes_hni
ENSUMAG00000012902	SRBD1	98	50.969	ENSORLG00015018598	si:ch211-117n7.8	85	56.172	Oryzias_latipes_hsok
ENSUMAG00000012902	SRBD1	93	52.341	ENSOMEG00000012229	si:ch211-117n7.8	92	52.758	Oryzias_melastigma
ENSUMAG00000012902	SRBD1	98	85.341	ENSOGAG00000001076	SRBD1	100	85.542	Otolemur_garnettii
ENSUMAG00000012902	SRBD1	98	86.130	ENSOARG00000005958	SRBD1	100	86.906	Ovis_aries
ENSUMAG00000012902	SRBD1	98	90.562	ENSPPAG00000038442	SRBD1	100	90.562	Pan_paniscus
ENSUMAG00000012902	SRBD1	98	95.783	ENSPPRG00000003449	SRBD1	100	95.783	Panthera_pardus
ENSUMAG00000012902	SRBD1	98	95.783	ENSPTIG00000012495	SRBD1	100	95.783	Panthera_tigris_altaica
ENSUMAG00000012902	SRBD1	98	90.562	ENSPTRG00000011889	SRBD1	100	90.562	Pan_troglodytes
ENSUMAG00000012902	SRBD1	98	91.165	ENSPANG00000008063	SRBD1	100	91.165	Papio_anubis
ENSUMAG00000012902	SRBD1	85	58.830	ENSPKIG00000021973	si:ch211-117n7.8	89	58.830	Paramormyrops_kingsleyae
ENSUMAG00000012902	SRBD1	98	73.320	ENSPSIG00000008992	SRBD1	100	73.974	Pelodiscus_sinensis
ENSUMAG00000012902	SRBD1	83	56.147	ENSPMGG00000013348	si:ch211-117n7.8	86	56.501	Periophthalmus_magnuspinnatus
ENSUMAG00000012902	SRBD1	98	83.431	ENSPEMG00000020684	Srbd1	100	83.431	Peromyscus_maniculatus_bairdii
ENSUMAG00000012902	SRBD1	97	52.118	ENSPFOG00000010650	si:ch211-117n7.8	83	57.715	Poecilia_formosa
ENSUMAG00000012902	SRBD1	97	51.823	ENSPLAG00000002141	si:ch211-117n7.8	83	57.715	Poecilia_latipinna
ENSUMAG00000012902	SRBD1	97	52.217	ENSPMEG00000018537	si:ch211-117n7.8	83	57.833	Poecilia_mexicana
ENSUMAG00000012902	SRBD1	87	55.754	ENSPREG00000003258	si:ch211-117n7.8	90	55.754	Poecilia_reticulata
ENSUMAG00000012902	SRBD1	99	82.865	ENSPPYG00000012444	SRBD1	100	82.959	Pongo_abelii
ENSUMAG00000012902	SRBD1	81	82.914	ENSPCAG00000005629	SRBD1	85	82.914	Procavia_capensis
ENSUMAG00000012902	SRBD1	98	79.800	ENSPCOG00000017669	SRBD1	100	79.800	Propithecus_coquereli
ENSUMAG00000012902	SRBD1	98	82.430	ENSPVAG00000001782	SRBD1	100	82.430	Pteropus_vampyrus
ENSUMAG00000012902	SRBD1	83	54.299	ENSPNYG00000000508	si:ch211-117n7.8	86	54.181	Pundamilia_nyererei
ENSUMAG00000012902	SRBD1	95	57.113	ENSPNAG00000013492	SRBD1	95	57.009	Pygocentrus_nattereri
ENSUMAG00000012902	SRBD1	98	81.124	ENSRNOG00000014720	Srbd1	99	81.827	Rattus_norvegicus
ENSUMAG00000012902	SRBD1	98	90.845	ENSRBIG00000033486	SRBD1	99	90.845	Rhinopithecus_bieti
ENSUMAG00000012902	SRBD1	98	90.845	ENSRROG00000041599	SRBD1	99	90.845	Rhinopithecus_roxellana
ENSUMAG00000012902	SRBD1	98	90.361	ENSSBOG00000024982	SRBD1	100	90.361	Saimiri_boliviensis_boliviensis
ENSUMAG00000012902	SRBD1	83	59.834	ENSSFOG00015001128	si:ch211-117n7.8	90	59.834	Scleropages_formosus
ENSUMAG00000012902	SRBD1	98	51.013	ENSSMAG00000018256	si:ch211-117n7.8	94	52.821	Scophthalmus_maximus
ENSUMAG00000012902	SRBD1	85	56.686	ENSSLDG00000023189	si:ch211-117n7.8	85	56.686	Seriola_lalandi_dorsalis
ENSUMAG00000012902	SRBD1	98	79.618	ENSSARG00000009740	SRBD1	100	79.618	Sorex_araneus
ENSUMAG00000012902	SRBD1	86	77.778	ENSSPUG00000010475	SRBD1	99	75.951	Sphenodon_punctatus
ENSUMAG00000012902	SRBD1	83	55.359	ENSSPAG00000008092	-	84	55.948	Stegastes_partitus
ENSUMAG00000012902	SRBD1	100	92.300	ENSSSCG00000008445	SRBD1	100	92.695	Sus_scrofa
ENSUMAG00000012902	SRBD1	83	77.497	ENSTGUG00000003878	SRBD1	100	77.497	Taeniopygia_guttata
ENSUMAG00000012902	SRBD1	98	50.965	ENSTRUG00000007080	si:ch211-117n7.8	93	57.344	Takifugu_rubripes
ENSUMAG00000012902	SRBD1	98	50.681	ENSTNIG00000007464	si:ch211-117n7.8	97	51.303	Tetraodon_nigroviridis
ENSUMAG00000012902	SRBD1	81	98.936	ENSTBEG00000004556	SRBD1	76	100.000	Tupaia_belangeri
ENSUMAG00000012902	SRBD1	92	94.470	ENSTTRG00000011871	SRBD1	94	94.470	Tursiops_truncatus
ENSUMAG00000012902	SRBD1	99	99.496	ENSUAMG00000008126	SRBD1	99	99.496	Ursus_americanus
ENSUMAG00000012902	SRBD1	90	92.952	ENSVPAG00000006825	SRBD1	100	92.952	Vicugna_pacos
ENSUMAG00000012902	SRBD1	100	95.726	ENSVVUG00000005389	SRBD1	99	98.101	Vulpes_vulpes
ENSUMAG00000012902	SRBD1	98	52.454	ENSXETG00000002760	srbd1	100	52.743	Xenopus_tropicalis
ENSUMAG00000012902	SRBD1	83	57.008	ENSXMAG00000016861	si:ch211-117n7.8	83	57.008	Xiphophorus_maculatus