EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000012987 (Gene tree)
Gene ID: 103665581
Gene Symbol: LSM12
Alias: -
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 18360 bases
Position: chrKK498611.1:499698-518057
Accession: 103665581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000017684	AD	PF09793.9	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000020884	LSM12-201	979	-	ENSUMAP00000017684	176 (aa)	XP_008691755	UPI0004E00BA4

Gene Model

Click here to download ENSUMAG00000012987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000012987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000012987	LSM12	90	96.835	ENSG00000161654	LSM12	81	96.835	Homo_sapiens
ENSUMAG00000012987	LSM12	90	83.544	ENSAPOG00000007907	lsm12b	81	83.544	Acanthochromis_polyacanthus
ENSUMAG00000012987	LSM12	90	98.734	ENSAMEG00000018321	LSM12	80	98.734	Ailuropoda_melanoleuca
ENSUMAG00000012987	LSM12	90	81.646	ENSACIG00000008538	lsm12b	81	81.646	Amphilophus_citrinellus
ENSUMAG00000012987	LSM12	90	82.911	ENSAOCG00000021847	lsm12b	71	82.911	Amphiprion_ocellaris
ENSUMAG00000012987	LSM12	90	82.911	ENSAPEG00000002252	lsm12b	81	82.911	Amphiprion_percula
ENSUMAG00000012987	LSM12	90	82.278	ENSATEG00000005705	lsm12b	81	82.278	Anabas_testudineus
ENSUMAG00000012987	LSM12	90	91.139	ENSACAG00000004618	LSM12	81	91.139	Anolis_carolinensis
ENSUMAG00000012987	LSM12	90	96.835	ENSANAG00000029011	LSM12	81	98.198	Aotus_nancymaae
ENSUMAG00000012987	LSM12	90	82.278	ENSACLG00000026332	lsm12b	81	82.278	Astatotilapia_calliptera
ENSUMAG00000012987	LSM12	90	77.848	ENSAMXG00000036117	lsm12a	73	77.848	Astyanax_mexicanus
ENSUMAG00000012987	LSM12	90	82.278	ENSAMXG00000032952	lsm12b	81	82.278	Astyanax_mexicanus
ENSUMAG00000012987	LSM12	90	96.835	ENSBTAG00000016252	LSM12	81	96.835	Bos_taurus
ENSUMAG00000012987	LSM12	90	96.835	ENSCJAG00000048480	LSM12	81	98.198	Callithrix_jacchus
ENSUMAG00000012987	LSM12	92	94.444	ENSCAFG00000014379	LSM12	76	94.444	Canis_familiaris
ENSUMAG00000012987	LSM12	90	96.835	ENSCAFG00020012173	LSM12	81	96.835	Canis_lupus_dingo
ENSUMAG00000012987	LSM12	90	96.835	ENSCHIG00000018175	LSM12	81	96.835	Capra_hircus
ENSUMAG00000012987	LSM12	90	96.835	ENSTSYG00000036361	LSM12	81	96.835	Carlito_syrichta
ENSUMAG00000012987	LSM12	100	90.341	ENSCAPG00000009647	LSM12	92	90.341	Cavia_aperea
ENSUMAG00000012987	LSM12	90	95.570	ENSCPOG00000012860	LSM12	81	96.396	Cavia_porcellus
ENSUMAG00000012987	LSM12	90	96.835	ENSCCAG00000032905	LSM12	81	98.198	Cebus_capucinus
ENSUMAG00000012987	LSM12	90	96.835	ENSCATG00000030577	-	81	98.198	Cercocebus_atys
ENSUMAG00000012987	LSM12	90	95.570	ENSCLAG00000015759	LSM12	81	96.396	Chinchilla_lanigera
ENSUMAG00000012987	LSM12	90	96.203	ENSCSAG00000003486	LSM12	81	96.203	Chlorocebus_sabaeus
ENSUMAG00000012987	LSM12	62	99.083	ENSCHOG00000001198	LSM12	100	99.083	Choloepus_hoffmanni
ENSUMAG00000012987	LSM12	90	89.873	ENSCPBG00000027105	LSM12	81	89.873	Chrysemys_picta_bellii
ENSUMAG00000012987	LSM12	90	96.835	ENSCANG00000043328	LSM12	81	98.198	Colobus_angolensis_palliatus
ENSUMAG00000012987	LSM12	90	96.835	ENSCGRG00001002094	Lsm12	81	98.198	Cricetulus_griseus_chok1gshd
ENSUMAG00000012987	LSM12	88	99.351	ENSCGRG00000004316	Lsm12	87	99.351	Cricetulus_griseus_crigri
ENSUMAG00000012987	LSM12	90	81.646	ENSCSEG00000008434	lsm12b	81	81.646	Cynoglossus_semilaevis
ENSUMAG00000012987	LSM12	90	82.278	ENSCVAG00000008755	lsm12b	81	82.278	Cyprinodon_variegatus
ENSUMAG00000012987	LSM12	90	72.785	ENSDARG00000028848	lsm12a	81	72.785	Danio_rerio
ENSUMAG00000012987	LSM12	90	82.911	ENSDARG00000109510	lsm12b	81	82.911	Danio_rerio
ENSUMAG00000012987	LSM12	90	96.203	ENSDNOG00000002418	LSM12	74	96.203	Dasypus_novemcinctus
ENSUMAG00000012987	LSM12	90	96.835	ENSDORG00000016381	Lsm12	81	98.198	Dipodomys_ordii
ENSUMAG00000012987	LSM12	93	82.530	ENSETEG00000011012	-	95	82.530	Echinops_telfairi
ENSUMAG00000012987	LSM12	90	96.203	ENSETEG00000008374	LSM12	81	96.203	Echinops_telfairi
ENSUMAG00000012987	LSM12	73	59.690	ENSEBUG00000016299	lsm12a	72	59.690	Eptatretus_burgeri
ENSUMAG00000012987	LSM12	90	96.835	ENSEASG00005010155	LSM12	81	96.835	Equus_asinus_asinus
ENSUMAG00000012987	LSM12	90	96.835	ENSECAG00000009071	LSM12	81	98.198	Equus_caballus
ENSUMAG00000012987	LSM12	87	98.693	ENSEEUG00000002419	-	100	98.693	Erinaceus_europaeus
ENSUMAG00000012987	LSM12	90	81.013	ENSELUG00000015538	lsm12b	80	75.316	Esox_lucius
ENSUMAG00000012987	LSM12	90	79.114	ENSELUG00000000256	-	81	79.114	Esox_lucius
ENSUMAG00000012987	LSM12	90	96.835	ENSFCAG00000037021	LSM12	81	96.835	Felis_catus
ENSUMAG00000012987	LSM12	84	99.324	ENSFDAG00000008954	LSM12	87	99.324	Fukomys_damarensis
ENSUMAG00000012987	LSM12	90	81.013	ENSFHEG00000019913	lsm12b	81	81.013	Fundulus_heteroclitus
ENSUMAG00000012987	LSM12	90	81.646	ENSGMOG00000015449	lsm12b	100	81.646	Gadus_morhua
ENSUMAG00000012987	LSM12	87	94.118	ENSGALG00000039803	LSM12	100	94.118	Gallus_gallus
ENSUMAG00000012987	LSM12	90	81.646	ENSGAFG00000011829	lsm12b	81	81.646	Gambusia_affinis
ENSUMAG00000012987	LSM12	90	82.278	ENSGACG00000003428	lsm12b	100	82.278	Gasterosteus_aculeatus
ENSUMAG00000012987	LSM12	90	91.139	ENSGAGG00000021965	LSM12	81	91.139	Gopherus_agassizii
ENSUMAG00000012987	LSM12	90	96.835	ENSGGOG00000010589	-	81	98.198	Gorilla_gorilla
ENSUMAG00000012987	LSM12	88	85.065	ENSHBUG00000007667	lsm12b	68	85.065	Haplochromis_burtoni
ENSUMAG00000012987	LSM12	90	96.835	ENSHGLG00000011411	LSM12	81	98.198	Heterocephalus_glaber_female
ENSUMAG00000012987	LSM12	99	94.286	ENSHGLG00100000241	LSM12	93	94.286	Heterocephalus_glaber_male
ENSUMAG00000012987	LSM12	90	81.013	ENSHCOG00000002094	lsm12b	81	81.013	Hippocampus_comes
ENSUMAG00000012987	LSM12	89	72.436	ENSIPUG00000008936	lsm12a	79	72.436	Ictalurus_punctatus
ENSUMAG00000012987	LSM12	90	82.911	ENSIPUG00000014800	lsm12	81	82.911	Ictalurus_punctatus
ENSUMAG00000012987	LSM12	90	96.835	ENSSTOG00000007403	LSM12	81	98.198	Ictidomys_tridecemlineatus
ENSUMAG00000012987	LSM12	90	95.570	ENSJJAG00000004364	-	81	97.297	Jaculus_jaculus
ENSUMAG00000012987	LSM12	70	86.290	ENSJJAG00000014652	-	73	86.290	Jaculus_jaculus
ENSUMAG00000012987	LSM12	90	84.906	ENSJJAG00000011793	-	81	87.097	Jaculus_jaculus
ENSUMAG00000012987	LSM12	90	82.911	ENSLBEG00000027999	lsm12b	81	82.911	Labrus_bergylta
ENSUMAG00000012987	LSM12	86	91.447	ENSLACG00000015981	LSM12	78	91.447	Latimeria_chalumnae
ENSUMAG00000012987	LSM12	90	81.013	ENSLOCG00000013079	lsm12b	80	81.013	Lepisosteus_oculatus
ENSUMAG00000012987	LSM12	90	96.835	ENSLAFG00000005202	LSM12	81	96.835	Loxodonta_africana
ENSUMAG00000012987	LSM12	90	96.835	ENSMFAG00000031376	LSM12	81	98.198	Macaca_fascicularis
ENSUMAG00000012987	LSM12	90	96.835	ENSMMUG00000006804	LSM12	81	98.198	Macaca_mulatta
ENSUMAG00000012987	LSM12	90	96.835	ENSMNEG00000030594	-	81	98.198	Macaca_nemestrina
ENSUMAG00000012987	LSM12	90	96.835	ENSMLEG00000039934	LSM12	81	98.198	Mandrillus_leucophaeus
ENSUMAG00000012987	LSM12	90	82.278	ENSMAMG00000004279	lsm12b	81	82.278	Mastacembelus_armatus
ENSUMAG00000012987	LSM12	90	82.278	ENSMZEG00005005754	lsm12b	81	82.278	Maylandia_zebra
ENSUMAG00000012987	LSM12	90	96.203	ENSMICG00000037219	LSM12	81	97.297	Microcebus_murinus
ENSUMAG00000012987	LSM12	90	96.835	ENSMOCG00000019878	-	81	98.198	Microtus_ochrogaster
ENSUMAG00000012987	LSM12	90	79.114	ENSMOCG00000017015	-	69	79.114	Microtus_ochrogaster
ENSUMAG00000012987	LSM12	90	82.278	ENSMMOG00000020848	lsm12b	81	82.278	Mola_mola
ENSUMAG00000012987	LSM12	90	82.911	ENSMALG00000007578	lsm12b	81	82.911	Monopterus_albus
ENSUMAG00000012987	LSM12	90	96.203	MGP_CAROLIEiJ_G0017241	Lsm12	81	97.297	Mus_caroli
ENSUMAG00000012987	LSM12	90	96.835	ENSMUSG00000020922	Lsm12	81	98.198	Mus_musculus
ENSUMAG00000012987	LSM12	90	87.429	MGP_PahariEiJ_G0018371	Lsm12	81	98.198	Mus_pahari
ENSUMAG00000012987	LSM12	90	96.203	MGP_SPRETEiJ_G0018084	Lsm12	79	100.000	Mus_spretus
ENSUMAG00000012987	LSM12	90	96.203	ENSMLUG00000006391	LSM12	81	96.203	Myotis_lucifugus
ENSUMAG00000012987	LSM12	90	96.835	ENSNGAG00000001870	Lsm12	81	98.198	Nannospalax_galili
ENSUMAG00000012987	LSM12	86	74.172	ENSNGAG00000015429	-	77	74.172	Nannospalax_galili
ENSUMAG00000012987	LSM12	90	82.278	ENSNBRG00000006266	lsm12b	81	82.278	Neolamprologus_brichardi
ENSUMAG00000012987	LSM12	90	96.835	ENSNLEG00000005580	-	81	98.198	Nomascus_leucogenys
ENSUMAG00000012987	LSM12	73	93.750	ENSMEUG00000007501	-	78	93.750	Notamacropus_eugenii
ENSUMAG00000012987	LSM12	90	96.835	ENSOPRG00000008552	LSM12	81	96.835	Ochotona_princeps
ENSUMAG00000012987	LSM12	90	85.443	ENSODEG00000007886	-	61	85.443	Octodon_degus
ENSUMAG00000012987	LSM12	90	95.570	ENSODEG00000017998	-	81	96.396	Octodon_degus
ENSUMAG00000012987	LSM12	90	82.278	ENSONIG00000007933	lsm12b	81	82.278	Oreochromis_niloticus
ENSUMAG00000012987	LSM12	89	91.720	ENSOCUG00000027889	-	81	91.720	Oryctolagus_cuniculus
ENSUMAG00000012987	LSM12	90	98.734	ENSOCUG00000008566	-	80	98.734	Oryctolagus_cuniculus
ENSUMAG00000012987	LSM12	89	90.446	ENSOCUG00000021254	-	81	90.446	Oryctolagus_cuniculus
ENSUMAG00000012987	LSM12	89	89.172	ENSOCUG00000024823	-	81	89.172	Oryctolagus_cuniculus
ENSUMAG00000012987	LSM12	90	82.278	ENSORLG00000011310	lsm12b	81	82.278	Oryzias_latipes
ENSUMAG00000012987	LSM12	90	82.278	ENSORLG00020002060	lsm12b	74	82.278	Oryzias_latipes_hni
ENSUMAG00000012987	LSM12	90	82.278	ENSORLG00015001647	lsm12b	74	82.278	Oryzias_latipes_hsok
ENSUMAG00000012987	LSM12	90	82.278	ENSOMEG00000006184	lsm12b	74	82.278	Oryzias_melastigma
ENSUMAG00000012987	LSM12	90	96.203	ENSOGAG00000010489	LSM12	81	96.203	Otolemur_garnettii
ENSUMAG00000012987	LSM12	91	98.137	ENSOARG00000006589	LSM12	80	98.137	Ovis_aries
ENSUMAG00000012987	LSM12	87	100.000	ENSPPAG00000034974	-	83	100.000	Pan_paniscus
ENSUMAG00000012987	LSM12	90	96.835	ENSPPRG00000023420	LSM12	81	96.835	Panthera_pardus
ENSUMAG00000012987	LSM12	63	96.396	ENSPTIG00000014850	-	81	96.396	Panthera_tigris_altaica
ENSUMAG00000012987	LSM12	87	100.000	ENSPTIG00000012704	-	82	100.000	Panthera_tigris_altaica
ENSUMAG00000012987	LSM12	90	96.835	ENSPTRG00000009261	LSM12	81	98.198	Pan_troglodytes
ENSUMAG00000012987	LSM12	90	96.835	ENSPANG00000021315	-	81	98.198	Papio_anubis
ENSUMAG00000012987	LSM12	88	75.325	ENSPKIG00000017932	-	79	75.325	Paramormyrops_kingsleyae
ENSUMAG00000012987	LSM12	90	82.911	ENSPKIG00000021058	lsm12b	81	82.911	Paramormyrops_kingsleyae
ENSUMAG00000012987	LSM12	90	82.278	ENSPMGG00000021344	lsm12b	81	82.278	Periophthalmus_magnuspinnatus
ENSUMAG00000012987	LSM12	90	96.835	ENSPEMG00000012199	Lsm12	81	98.198	Peromyscus_maniculatus_bairdii
ENSUMAG00000012987	LSM12	78	63.504	ENSPMAG00000005461	lsm12a	79	63.504	Petromyzon_marinus
ENSUMAG00000012987	LSM12	90	93.038	ENSPCIG00000020244	LSM12	81	93.038	Phascolarctos_cinereus
ENSUMAG00000012987	LSM12	90	80.380	ENSPFOG00000015930	lsm12b	81	80.380	Poecilia_formosa
ENSUMAG00000012987	LSM12	90	80.380	ENSPLAG00000021089	lsm12b	81	80.380	Poecilia_latipinna
ENSUMAG00000012987	LSM12	90	80.380	ENSPMEG00000012961	lsm12b	81	80.380	Poecilia_mexicana
ENSUMAG00000012987	LSM12	90	81.646	ENSPREG00000010236	lsm12b	88	81.646	Poecilia_reticulata
ENSUMAG00000012987	LSM12	90	96.835	ENSPPYG00000008344	LSM12	81	96.835	Pongo_abelii
ENSUMAG00000012987	LSM12	73	96.094	ENSPCAG00000008790	LSM12	81	96.094	Procavia_capensis
ENSUMAG00000012987	LSM12	90	96.835	ENSPCOG00000027951	LSM12	81	98.198	Propithecus_coquereli
ENSUMAG00000012987	LSM12	90	96.203	ENSPVAG00000013706	LSM12	81	96.203	Pteropus_vampyrus
ENSUMAG00000012987	LSM12	90	82.278	ENSPNYG00000003386	lsm12b	81	82.278	Pundamilia_nyererei
ENSUMAG00000012987	LSM12	90	80.380	ENSPNAG00000004186	lsm12b	81	80.380	Pygocentrus_nattereri
ENSUMAG00000012987	LSM12	90	75.949	ENSPNAG00000018435	lsm12a	81	75.949	Pygocentrus_nattereri
ENSUMAG00000012987	LSM12	90	96.835	ENSRNOG00000020894	Lsm12	81	96.835	Rattus_norvegicus
ENSUMAG00000012987	LSM12	90	96.835	ENSRBIG00000027910	LSM12	81	98.198	Rhinopithecus_bieti
ENSUMAG00000012987	LSM12	66	82.759	ENSRROG00000000537	-	80	82.759	Rhinopithecus_roxellana
ENSUMAG00000012987	LSM12	90	96.835	ENSRROG00000045530	-	81	98.198	Rhinopithecus_roxellana
ENSUMAG00000012987	LSM12	67	32.061	YHR121W	-	68	32.061	Saccharomyces_cerevisiae
ENSUMAG00000012987	LSM12	90	96.835	ENSSBOG00000025310	LSM12	81	98.198	Saimiri_boliviensis_boliviensis
ENSUMAG00000012987	LSM12	88	96.104	ENSSHAG00000014914	LSM12	97	96.104	Sarcophilus_harrisii
ENSUMAG00000012987	LSM12	90	84.177	ENSSFOG00015009612	lsm12	81	84.177	Scleropages_formosus
ENSUMAG00000012987	LSM12	90	80.380	ENSSFOG00015020392	lsm12a	81	80.380	Scleropages_formosus
ENSUMAG00000012987	LSM12	90	82.911	ENSSMAG00000008089	lsm12b	81	82.911	Scophthalmus_maximus
ENSUMAG00000012987	LSM12	90	83.544	ENSSDUG00000012711	lsm12b	81	83.544	Seriola_dumerili
ENSUMAG00000012987	LSM12	90	83.544	ENSSLDG00000007404	lsm12b	81	83.544	Seriola_lalandi_dorsalis
ENSUMAG00000012987	LSM12	87	99.346	ENSSARG00000005537	LSM12	100	99.346	Sorex_araneus
ENSUMAG00000012987	LSM12	90	91.772	ENSSPUG00000011984	LSM12	81	91.772	Sphenodon_punctatus
ENSUMAG00000012987	LSM12	90	82.911	ENSSPAG00000017058	lsm12b	81	82.911	Stegastes_partitus
ENSUMAG00000012987	LSM12	90	96.835	ENSSSCG00000032394	LSM12	81	96.835	Sus_scrofa
ENSUMAG00000012987	LSM12	90	81.013	ENSTRUG00000007121	lsm12b	81	81.013	Takifugu_rubripes
ENSUMAG00000012987	LSM12	90	81.646	ENSTNIG00000014436	lsm12b	81	81.646	Tetraodon_nigroviridis
ENSUMAG00000012987	LSM12	90	96.203	ENSTBEG00000012523	-	81	96.203	Tupaia_belangeri
ENSUMAG00000012987	LSM12	90	92.405	ENSTBEG00000012392	-	81	92.405	Tupaia_belangeri
ENSUMAG00000012987	LSM12	90	96.835	ENSTTRG00000010433	LSM12	81	96.835	Tursiops_truncatus
ENSUMAG00000012987	LSM12	91	100.000	ENSUAMG00000006313	LSM12	100	100.000	Ursus_americanus
ENSUMAG00000012987	LSM12	92	87.654	ENSVPAG00000011145	LSM12	83	87.654	Vicugna_pacos
ENSUMAG00000012987	LSM12	90	96.835	ENSVVUG00000017581	LSM12	81	96.835	Vulpes_vulpes
ENSUMAG00000012987	LSM12	83	65.753	ENSXETG00000003371	lsm12	72	65.753	Xenopus_tropicalis
ENSUMAG00000012987	LSM12	90	81.646	ENSXCOG00000003994	lsm12b	81	81.646	Xiphophorus_couchianus
ENSUMAG00000012987	LSM12	90	81.646	ENSXMAG00000020950	lsm12b	81	81.646	Xiphophorus_maculatus