EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000013211 (Gene tree)
Gene ID: 103666560
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha%2C somatic form-like
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 11110 bases
Position: chrKK498615.1:12549399-12560508
Accession: 103666560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000017993	GTP_EFTU	PF00009.27	4.8e-53	1	1
ENSUMAP00000017993	GTP_EFTU_D2	PF03144.25	1e-12	1	1
ENSUMAP00000017993	GTP_EFTU_D3	PF03143.17	3.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000021266	-	1386	-	ENSUMAP00000017993	461 (aa)	XP_008692838	UPI0004DFEE79

Gene Model

Click here to download ENSUMAG00000013211's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03013	RNA transport	KEGG
umr05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000013211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000013211	-	95	30.649	ENSUMAG00000009341	TUFM	94	30.090
ENSUMAG00000013211	-	98	81.596	ENSUMAG00000012312	EEF1A1	99	80.870
ENSUMAG00000013211	-	99	65.870	ENSUMAG00000013062	-	99	65.870
ENSUMAG00000013211	-	91	73.872	ENSUMAG00000006959	-	98	73.872
ENSUMAG00000013211	-	93	84.382	ENSUMAG00000022209	EEF1A2	98	84.382
ENSUMAG00000013211	-	99	77.657	ENSUMAG00000025557	-	99	77.657
ENSUMAG00000013211	-	95	35.747	ENSUMAG00000013348	GSPT2	86	35.747
ENSUMAG00000013211	-	96	35.440	ENSUMAG00000004033	GSPT1	85	35.747
ENSUMAG00000013211	-	95	38.724	ENSUMAG00000024395	HBS1L	74	38.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000013211	-	67	82.736	ENSAPOG00000004757	eef1a1l1	99	93.750	Acanthochromis_polyacanthus
ENSUMAG00000013211	-	100	77.223	ENSAMEG00000004317	-	100	77.223	Ailuropoda_melanoleuca
ENSUMAG00000013211	-	100	98.265	ENSAMEG00000009677	-	100	98.265	Ailuropoda_melanoleuca
ENSUMAG00000013211	-	100	96.746	ENSCAFG00000013249	-	100	96.746	Canis_familiaris
ENSUMAG00000013211	-	100	96.746	ENSCAFG00020020007	-	100	96.746	Canis_lupus_dingo
ENSUMAG00000013211	-	100	86.768	ENSCPBG00000000748	-	100	86.768	Chrysemys_picta_bellii
ENSUMAG00000013211	-	100	85.900	ENSCPBG00000000646	-	100	85.900	Chrysemys_picta_bellii
ENSUMAG00000013211	-	99	86.304	ENSDARG00000020850	eef1a1l1	99	86.304	Danio_rerio
ENSUMAG00000013211	-	85	80.964	ENSEASG00005018013	-	99	80.964	Equus_asinus_asinus
ENSUMAG00000013211	-	98	85.903	ENSEASG00005012365	-	96	86.256	Equus_asinus_asinus
ENSUMAG00000013211	-	100	83.514	ENSECAG00000022260	-	100	83.514	Equus_caballus
ENSUMAG00000013211	-	100	84.382	ENSELUG00000023536	eef1a1l1	100	84.382	Esox_lucius
ENSUMAG00000013211	-	100	85.466	ENSFCAG00000030530	-	100	85.466	Felis_catus
ENSUMAG00000013211	-	100	86.334	ENSGAGG00000000648	-	100	86.334	Gopherus_agassizii
ENSUMAG00000013211	-	100	86.768	ENSGAGG00000000642	-	100	86.768	Gopherus_agassizii
ENSUMAG00000013211	-	90	83.293	ENSLBEG00000002790	eef1a1l1	99	83.293	Labrus_bergylta
ENSUMAG00000013211	-	100	90.672	ENSLAFG00000028081	-	99	90.672	Loxodonta_africana
ENSUMAG00000013211	-	100	85.900	ENSLAFG00000025161	-	100	85.900	Loxodonta_africana
ENSUMAG00000013211	-	75	86.994	ENSOANG00000012066	-	100	86.994	Ornithorhynchus_anatinus
ENSUMAG00000013211	-	90	84.746	ENSOMEG00000006888	-	99	84.746	Oryzias_melastigma
ENSUMAG00000013211	-	100	85.466	ENSOARG00000002943	-	100	85.466	Ovis_aries
ENSUMAG00000013211	-	97	85.714	ENSPPRG00000005678	-	96	85.714	Panthera_pardus
ENSUMAG00000013211	-	100	94.577	ENSPPRG00000008525	-	100	94.577	Panthera_pardus
ENSUMAG00000013211	-	100	96.529	ENSPTIG00000006939	-	100	96.529	Panthera_tigris_altaica
ENSUMAG00000013211	-	100	86.117	ENSPSIG00000008610	-	100	86.117	Pelodiscus_sinensis
ENSUMAG00000013211	-	66	93.519	ENSPVAG00000007682	-	65	93.519	Pteropus_vampyrus
ENSUMAG00000013211	-	100	78.742	ENSSMAG00000018455	-	99	78.742	Scophthalmus_maximus
ENSUMAG00000013211	-	100	85.683	ENSSPUG00000003655	-	100	85.683	Sphenodon_punctatus
ENSUMAG00000013211	-	98	88.274	ENSSSCG00000038035	-	100	88.069	Sus_scrofa
ENSUMAG00000013211	-	100	85.683	ENSSSCG00000034113	-	100	85.683	Sus_scrofa
ENSUMAG00000013211	-	100	74.403	ENSUAMG00000007676	-	100	74.403	Ursus_americanus
ENSUMAG00000013211	-	100	96.095	ENSUAMG00000008928	-	100	96.095	Ursus_americanus
ENSUMAG00000013211	-	51	78.298	ENSUAMG00000006085	-	98	78.298	Ursus_americanus
ENSUMAG00000013211	-	100	96.529	ENSVVUG00000026886	-	100	96.529	Vulpes_vulpes
ENSUMAG00000013211	-	100	84.165	ENSXETG00000022604	eef1a1o	100	84.165	Xenopus_tropicalis