EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000013404 (Gene tree)
Gene ID: 103660870
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 152992 bases
Position: chrKK498572.1:12182523-12335514
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000018258	RRM_1	PF00076.22	2e-09	1	1
ENSUMAP00000018262	RRM_1	PF00076.22	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000021592	SCAF8-202	3882	-	ENSUMAP00000018262	1245 (aa)	-	-
ENSUMAT00000021587	SCAF8-201	3884	-	ENSUMAP00000018258	1245 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000013404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000013404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000013404	SCAF8	100	96.549	ENSG00000213079	SCAF8	98	96.549	Homo_sapiens
ENSUMAG00000013404	SCAF8	87	68.850	ENSAPOG00000015527	SCAF8	75	68.356	Acanthochromis_polyacanthus
ENSUMAG00000013404	SCAF8	100	99.679	ENSAMEG00000007583	SCAF8	93	99.679	Ailuropoda_melanoleuca
ENSUMAG00000013404	SCAF8	87	68.850	ENSAOCG00000002421	SCAF8	75	68.356	Amphiprion_ocellaris
ENSUMAG00000013404	SCAF8	88	65.718	ENSATEG00000006959	SCAF8	95	64.808	Anabas_testudineus
ENSUMAG00000013404	SCAF8	100	79.094	ENSAPLG00000005765	SCAF8	98	79.094	Anas_platyrhynchos
ENSUMAG00000013404	SCAF8	100	74.682	ENSACAG00000005282	SCAF8	98	74.522	Anolis_carolinensis
ENSUMAG00000013404	SCAF8	100	95.746	ENSANAG00000036184	SCAF8	98	95.746	Aotus_nancymaae
ENSUMAG00000013404	SCAF8	86	68.401	ENSACLG00000018828	SCAF8	78	67.782	Astatotilapia_calliptera
ENSUMAG00000013404	SCAF8	100	95.582	ENSBTAG00000031917	SCAF8	98	95.582	Bos_taurus
ENSUMAG00000013404	SCAF8	100	95.506	ENSCJAG00000012631	SCAF8	93	95.506	Callithrix_jacchus
ENSUMAG00000013404	SCAF8	100	98.315	ENSCAFG00000000570	SCAF8	98	98.315	Canis_familiaris
ENSUMAG00000013404	SCAF8	100	98.315	ENSCAFG00020015048	SCAF8	97	98.315	Canis_lupus_dingo
ENSUMAG00000013404	SCAF8	100	95.341	ENSCHIG00000025041	SCAF8	98	95.341	Capra_hircus
ENSUMAG00000013404	SCAF8	100	95.185	ENSTSYG00000010991	SCAF8	96	95.185	Carlito_syrichta
ENSUMAG00000013404	SCAF8	66	97.845	ENSCAPG00000003300	SCAF8	85	97.807	Cavia_aperea
ENSUMAG00000013404	SCAF8	100	86.651	ENSCPOG00000022216	-	98	85.851	Cavia_porcellus
ENSUMAG00000013404	SCAF8	100	95.506	ENSCCAG00000024952	SCAF8	98	95.506	Cebus_capucinus
ENSUMAG00000013404	SCAF8	100	96.308	ENSCATG00000035361	SCAF8	99	96.308	Cercocebus_atys
ENSUMAG00000013404	SCAF8	100	94.141	ENSCLAG00000004910	SCAF8	99	94.141	Chinchilla_lanigera
ENSUMAG00000013404	SCAF8	100	96.469	ENSCSAG00000013430	SCAF8	96	96.469	Chlorocebus_sabaeus
ENSUMAG00000013404	SCAF8	100	75.655	ENSCPBG00000016330	SCAF8	98	75.281	Chrysemys_picta_bellii
ENSUMAG00000013404	SCAF8	100	96.148	ENSCANG00000039499	SCAF8	99	96.148	Colobus_angolensis_palliatus
ENSUMAG00000013404	SCAF8	100	91.493	ENSCGRG00001020167	Scaf8	98	91.493	Cricetulus_griseus_chok1gshd
ENSUMAG00000013404	SCAF8	100	91.493	ENSCGRG00000004120	Scaf8	98	91.493	Cricetulus_griseus_crigri
ENSUMAG00000013404	SCAF8	87	66.087	ENSCSEG00000000043	-	76	67.205	Cynoglossus_semilaevis
ENSUMAG00000013404	SCAF8	83	67.539	ENSCVAG00000000925	SCAF8	77	67.016	Cyprinodon_variegatus
ENSUMAG00000013404	SCAF8	98	89.992	ENSDNOG00000025271	SCAF8	100	93.601	Dasypus_novemcinctus
ENSUMAG00000013404	SCAF8	100	92.394	ENSDORG00000006391	Scaf8	98	92.474	Dipodomys_ordii
ENSUMAG00000013404	SCAF8	100	96.867	ENSEASG00005018879	SCAF8	98	96.790	Equus_asinus_asinus
ENSUMAG00000013404	SCAF8	100	96.948	ENSECAG00000005540	SCAF8	98	96.948	Equus_caballus
ENSUMAG00000013404	SCAF8	86	65.881	ENSELUG00000002779	SCAF8	74	65.299	Esox_lucius
ENSUMAG00000013404	SCAF8	100	97.831	ENSFCAG00000023424	SCAF8	98	97.831	Felis_catus
ENSUMAG00000013404	SCAF8	100	79.110	ENSFALG00000012433	SCAF8	98	79.365	Ficedula_albicollis
ENSUMAG00000013404	SCAF8	100	94.066	ENSFDAG00000010335	SCAF8	98	94.066	Fukomys_damarensis
ENSUMAG00000013404	SCAF8	92	54.736	ENSFHEG00000008284	SCAF8	75	55.444	Fundulus_heteroclitus
ENSUMAG00000013404	SCAF8	80	56.600	ENSGMOG00000018812	SCAF8	75	60.978	Gadus_morhua
ENSUMAG00000013404	SCAF8	100	80.317	ENSGALG00000013635	SCAF8	97	79.921	Gallus_gallus
ENSUMAG00000013404	SCAF8	85	68.734	ENSGAFG00000018033	SCAF8	76	65.190	Gambusia_affinis
ENSUMAG00000013404	SCAF8	93	53.094	ENSGACG00000006909	SCAF8	98	53.885	Gasterosteus_aculeatus
ENSUMAG00000013404	SCAF8	64	73.399	ENSGAGG00000017820	-	88	73.399	Gopherus_agassizii
ENSUMAG00000013404	SCAF8	100	96.388	ENSGGOG00000008645	SCAF8	98	96.388	Gorilla_gorilla
ENSUMAG00000013404	SCAF8	86	68.278	ENSHBUG00000019537	SCAF8	78	67.658	Haplochromis_burtoni
ENSUMAG00000013404	SCAF8	100	94.066	ENSHGLG00000003619	SCAF8	98	94.066	Heterocephalus_glaber_female
ENSUMAG00000013404	SCAF8	100	94.066	ENSHGLG00100004708	SCAF8	99	94.066	Heterocephalus_glaber_male
ENSUMAG00000013404	SCAF8	100	95.269	ENSSTOG00000026043	SCAF8	98	95.269	Ictidomys_tridecemlineatus
ENSUMAG00000013404	SCAF8	100	92.456	ENSJJAG00000020480	Scaf8	98	92.456	Jaculus_jaculus
ENSUMAG00000013404	SCAF8	87	68.238	ENSKMAG00000012767	SCAF8	76	67.742	Kryptolebias_marmoratus
ENSUMAG00000013404	SCAF8	64	77.407	ENSLBEG00000012484	-	59	77.500	Labrus_bergylta
ENSUMAG00000013404	SCAF8	86	78.052	ENSLACG00000001394	SCAF8	98	62.713	Latimeria_chalumnae
ENSUMAG00000013404	SCAF8	100	60.606	ENSLOCG00000016856	SCAF8	98	59.809	Lepisosteus_oculatus
ENSUMAG00000013404	SCAF8	100	93.349	ENSLAFG00000000022	SCAF8	98	93.910	Loxodonta_africana
ENSUMAG00000013404	SCAF8	100	96.469	ENSMFAG00000032738	SCAF8	98	96.469	Macaca_fascicularis
ENSUMAG00000013404	SCAF8	100	96.469	ENSMMUG00000015163	SCAF8	98	96.469	Macaca_mulatta
ENSUMAG00000013404	SCAF8	100	96.469	ENSMNEG00000043466	SCAF8	99	96.469	Macaca_nemestrina
ENSUMAG00000013404	SCAF8	100	96.308	ENSMLEG00000034845	SCAF8	99	96.308	Mandrillus_leucophaeus
ENSUMAG00000013404	SCAF8	85	65.987	ENSMAMG00000009457	SCAF8	76	64.586	Mastacembelus_armatus
ENSUMAG00000013404	SCAF8	86	68.278	ENSMZEG00005005698	SCAF8	78	67.658	Maylandia_zebra
ENSUMAG00000013404	SCAF8	100	79.905	ENSMGAG00000012762	SCAF8	98	79.668	Meleagris_gallopavo
ENSUMAG00000013404	SCAF8	100	90.931	ENSMAUG00000009513	Scaf8	99	90.931	Mesocricetus_auratus
ENSUMAG00000013404	SCAF8	100	95.509	ENSMICG00000028965	SCAF8	98	95.349	Microcebus_murinus
ENSUMAG00000013404	SCAF8	100	91.974	ENSMOCG00000014950	Scaf8	98	91.974	Microtus_ochrogaster
ENSUMAG00000013404	SCAF8	86	64.994	ENSMMOG00000002216	SCAF8	77	63.488	Mola_mola
ENSUMAG00000013404	SCAF8	100	86.768	ENSMODG00000008301	SCAF8	98	86.768	Monodelphis_domestica
ENSUMAG00000013404	SCAF8	87	67.614	ENSMALG00000011584	SCAF8	77	67.284	Monopterus_albus
ENSUMAG00000013404	SCAF8	100	90.763	MGP_CAROLIEiJ_G0021016	Scaf8	98	90.763	Mus_caroli
ENSUMAG00000013404	SCAF8	100	90.924	ENSMUSG00000046201	Scaf8	98	90.924	Mus_musculus
ENSUMAG00000013404	SCAF8	100	91.406	MGP_PahariEiJ_G0023334	Scaf8	98	91.406	Mus_pahari
ENSUMAG00000013404	SCAF8	100	98.313	ENSMPUG00000001974	SCAF8	96	98.313	Mustela_putorius_furo
ENSUMAG00000013404	SCAF8	100	93.976	ENSMLUG00000029190	SCAF8	98	93.976	Myotis_lucifugus
ENSUMAG00000013404	SCAF8	100	92.536	ENSNGAG00000012332	Scaf8	98	92.536	Nannospalax_galili
ENSUMAG00000013404	SCAF8	100	52.119	ENSNBRG00000009067	SCAF8	98	52.287	Neolamprologus_brichardi
ENSUMAG00000013404	SCAF8	100	95.036	ENSNLEG00000015509	SCAF8	98	95.036	Nomascus_leucogenys
ENSUMAG00000013404	SCAF8	68	100.000	ENSOPRG00000018413	-	75	92.632	Ochotona_princeps
ENSUMAG00000013404	SCAF8	100	94.151	ENSODEG00000007296	SCAF8	98	94.151	Octodon_degus
ENSUMAG00000013404	SCAF8	100	54.796	ENSONIG00000008119	SCAF8	98	54.739	Oreochromis_niloticus
ENSUMAG00000013404	SCAF8	100	95.509	ENSOCUG00000026063	SCAF8	98	95.509	Oryctolagus_cuniculus
ENSUMAG00000013404	SCAF8	85	68.869	ENSORLG00000017358	SCAF8	76	68.742	Oryzias_latipes
ENSUMAG00000013404	SCAF8	85	68.996	ENSORLG00020002214	SCAF8	76	68.869	Oryzias_latipes_hni
ENSUMAG00000013404	SCAF8	85	69.123	ENSORLG00015015779	SCAF8	76	68.996	Oryzias_latipes_hsok
ENSUMAG00000013404	SCAF8	85	69.123	ENSOMEG00000015471	SCAF8	76	68.996	Oryzias_melastigma
ENSUMAG00000013404	SCAF8	100	95.907	ENSOGAG00000034223	SCAF8	93	95.907	Otolemur_garnettii
ENSUMAG00000013404	SCAF8	100	95.261	ENSOARG00000004159	SCAF8	99	95.261	Ovis_aries
ENSUMAG00000013404	SCAF8	100	96.388	ENSPPAG00000039826	SCAF8	98	96.388	Pan_paniscus
ENSUMAG00000013404	SCAF8	100	97.831	ENSPPRG00000023175	SCAF8	98	97.831	Panthera_pardus
ENSUMAG00000013404	SCAF8	100	97.831	ENSPTIG00000014836	SCAF8	99	97.831	Panthera_tigris_altaica
ENSUMAG00000013404	SCAF8	100	96.469	ENSPTRG00000018727	SCAF8	98	96.469	Pan_troglodytes
ENSUMAG00000013404	SCAF8	100	96.308	ENSPANG00000017489	SCAF8	98	94.944	Papio_anubis
ENSUMAG00000013404	SCAF8	100	56.269	ENSPKIG00000021212	SCAF8	98	56.418	Paramormyrops_kingsleyae
ENSUMAG00000013404	SCAF8	91	70.325	ENSPSIG00000008614	SCAF8	96	75.931	Pelodiscus_sinensis
ENSUMAG00000013404	SCAF8	100	91.653	ENSPEMG00000010531	Scaf8	99	91.653	Peromyscus_maniculatus_bairdii
ENSUMAG00000013404	SCAF8	100	87.650	ENSPCIG00000001141	SCAF8	98	87.650	Phascolarctos_cinereus
ENSUMAG00000013404	SCAF8	100	54.666	ENSPFOG00000004176	SCAF8	98	54.806	Poecilia_formosa
ENSUMAG00000013404	SCAF8	85	69.250	ENSPLAG00000021432	SCAF8	76	68.615	Poecilia_latipinna
ENSUMAG00000013404	SCAF8	85	69.377	ENSPMEG00000007591	SCAF8	84	68.557	Poecilia_mexicana
ENSUMAG00000013404	SCAF8	85	69.123	ENSPREG00000000652	SCAF8	76	68.488	Poecilia_reticulata
ENSUMAG00000013404	SCAF8	100	94.792	ENSPPYG00000017121	SCAF8	98	94.471	Pongo_abelii
ENSUMAG00000013404	SCAF8	85	97.373	ENSPCAG00000013044	SCAF8	88	97.373	Procavia_capensis
ENSUMAG00000013404	SCAF8	100	95.990	ENSPCOG00000002067	SCAF8	98	95.990	Propithecus_coquereli
ENSUMAG00000013404	SCAF8	98	92.577	ENSPVAG00000005582	SCAF8	98	93.638	Pteropus_vampyrus
ENSUMAG00000013404	SCAF8	86	68.401	ENSPNYG00000007277	SCAF8	78	67.782	Pundamilia_nyererei
ENSUMAG00000013404	SCAF8	86	68.142	ENSPNAG00000024740	SCAF8	80	68.394	Pygocentrus_nattereri
ENSUMAG00000013404	SCAF8	100	91.004	ENSRNOG00000016919	Scaf8	98	91.004	Rattus_norvegicus
ENSUMAG00000013404	SCAF8	100	96.228	ENSRBIG00000035769	SCAF8	99	96.228	Rhinopithecus_bieti
ENSUMAG00000013404	SCAF8	100	96.308	ENSRROG00000013580	SCAF8	99	96.308	Rhinopithecus_roxellana
ENSUMAG00000013404	SCAF8	100	95.666	ENSSBOG00000027023	SCAF8	98	95.666	Saimiri_boliviensis_boliviensis
ENSUMAG00000013404	SCAF8	100	87.019	ENSSHAG00000009915	SCAF8	98	87.019	Sarcophilus_harrisii
ENSUMAG00000013404	SCAF8	100	53.876	ENSSFOG00015009481	SCAF8	61	46.126	Scleropages_formosus
ENSUMAG00000013404	SCAF8	86	67.946	ENSSMAG00000008275	SCAF8	75	67.079	Scophthalmus_maximus
ENSUMAG00000013404	SCAF8	100	77.385	ENSSPUG00000015219	SCAF8	98	77.231	Sphenodon_punctatus
ENSUMAG00000013404	SCAF8	100	96.145	ENSSSCG00000004070	SCAF8	100	96.145	Sus_scrofa
ENSUMAG00000013404	SCAF8	100	79.857	ENSTGUG00000011151	SCAF8	99	80.096	Taeniopygia_guttata
ENSUMAG00000013404	SCAF8	85	67.640	ENSTRUG00000009243	SCAF8	76	67.513	Takifugu_rubripes
ENSUMAG00000013404	SCAF8	91	69.272	ENSTNIG00000016885	SCAF8	97	69.272	Tetraodon_nigroviridis
ENSUMAG00000013404	SCAF8	100	95.743	ENSTTRG00000014538	SCAF8	99	95.743	Tursiops_truncatus
ENSUMAG00000013404	SCAF8	100	99.920	ENSUAMG00000024736	SCAF8	99	99.920	Ursus_americanus
ENSUMAG00000013404	SCAF8	67	84.852	ENSVPAG00000012465	SCAF8	98	84.371	Vicugna_pacos
ENSUMAG00000013404	SCAF8	100	98.394	ENSVVUG00000007532	SCAF8	100	98.394	Vulpes_vulpes
ENSUMAG00000013404	SCAF8	100	61.331	ENSXETG00000013132	scaf8	98	61.410	Xenopus_tropicalis
ENSUMAG00000013404	SCAF8	85	69.250	ENSXMAG00000019192	SCAF8	76	68.615	Xiphophorus_maculatus