EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000013614 (Gene tree)
Gene ID: 103665781
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 78176 bases
Position: chrKK498611.1:14775364-14853539
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000018630	Ago_hook	PF10427.9	1.7e-19	1	1
ENSUMAP00000018634	Ago_hook	PF10427.9	2.9e-19	1	1
ENSUMAP00000018634	RRM_1	PF00076.22	0.00017	1	1
ENSUMAP00000018630	RRM_1	PF00076.22	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000022044	TNRC6C-202	5613	-	ENSUMAP00000018634	1870 (aa)	-	-
ENSUMAT00000022040	TNRC6C-201	5736	-	ENSUMAP00000018630	1911 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000013614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000013614's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000013614	TNRC6C	99	35.772	ENSUMAG00000014336	TNRC6B	99	36.093
ENSUMAG00000013614	TNRC6C	99	42.405	ENSUMAG00000008274	TNRC6A	99	42.757

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000013614	TNRC6C	99	89.917	ENSG00000078687	TNRC6C	100	92.632	Homo_sapiens
ENSUMAG00000013614	TNRC6C	72	52.311	ENSAPOG00000019749	tnrc6c1	99	47.748	Acanthochromis_polyacanthus
ENSUMAG00000013614	TNRC6C	94	93.674	ENSAMEG00000013756	TNRC6C	99	93.366	Ailuropoda_melanoleuca
ENSUMAG00000013614	TNRC6C	91	51.620	ENSACIG00000008075	tnrc6c1	98	52.063	Amphilophus_citrinellus
ENSUMAG00000013614	TNRC6C	72	52.765	ENSAOCG00000023968	tnrc6c1	99	47.911	Amphiprion_ocellaris
ENSUMAG00000013614	TNRC6C	72	52.765	ENSAPEG00000009020	tnrc6c1	99	48.263	Amphiprion_percula
ENSUMAG00000013614	TNRC6C	99	84.014	ENSAPLG00000005456	TNRC6C	99	84.014	Anas_platyrhynchos
ENSUMAG00000013614	TNRC6C	99	84.367	ENSACAG00000016198	TNRC6C	98	84.419	Anolis_carolinensis
ENSUMAG00000013614	TNRC6C	99	89.364	ENSANAG00000021554	TNRC6C	100	88.360	Aotus_nancymaae
ENSUMAG00000013614	TNRC6C	93	47.310	ENSACLG00000000424	tnrc6c1	98	50.878	Astatotilapia_calliptera
ENSUMAG00000013614	TNRC6C	99	86.999	ENSBTAG00000018658	TNRC6C	100	87.334	Bos_taurus
ENSUMAG00000013614	TNRC6C	99	89.364	ENSCJAG00000019431	TNRC6C	100	88.477	Callithrix_jacchus
ENSUMAG00000013614	TNRC6C	99	95.013	ENSCAFG00000005224	TNRC6C	99	95.013	Canis_familiaris
ENSUMAG00000013614	TNRC6C	99	95.820	ENSCAFG00020006661	TNRC6C	99	95.820	Canis_lupus_dingo
ENSUMAG00000013614	TNRC6C	99	86.632	ENSCHIG00000026004	TNRC6C	100	88.439	Capra_hircus
ENSUMAG00000013614	TNRC6C	90	89.862	ENSTSYG00000005403	TNRC6C	100	89.862	Carlito_syrichta
ENSUMAG00000013614	TNRC6C	99	81.379	ENSCAPG00000007307	TNRC6C	99	80.818	Cavia_aperea
ENSUMAG00000013614	TNRC6C	99	85.820	ENSCPOG00000000467	TNRC6C	99	86.483	Cavia_porcellus
ENSUMAG00000013614	TNRC6C	99	89.704	ENSCCAG00000030524	TNRC6C	100	89.407	Cebus_capucinus
ENSUMAG00000013614	TNRC6C	99	89.600	ENSCATG00000033135	TNRC6C	100	89.292	Cercocebus_atys
ENSUMAG00000013614	TNRC6C	99	87.414	ENSCLAG00000011139	TNRC6C	99	87.295	Chinchilla_lanigera
ENSUMAG00000013614	TNRC6C	99	89.184	ENSCSAG00000005167	TNRC6C	99	88.958	Chlorocebus_sabaeus
ENSUMAG00000013614	TNRC6C	70	84.034	ENSCHOG00000000088	TNRC6C	75	84.034	Choloepus_hoffmanni
ENSUMAG00000013614	TNRC6C	93	85.593	ENSCPBG00000027960	TNRC6C	100	85.512	Chrysemys_picta_bellii
ENSUMAG00000013614	TNRC6C	99	89.520	ENSCANG00000041771	TNRC6C	100	89.062	Colobus_angolensis_palliatus
ENSUMAG00000013614	TNRC6C	99	86.231	ENSCGRG00001022686	Tnrc6c	100	86.136	Cricetulus_griseus_chok1gshd
ENSUMAG00000013614	TNRC6C	99	86.231	ENSCGRG00000018041	Tnrc6c	100	86.136	Cricetulus_griseus_crigri
ENSUMAG00000013614	TNRC6C	98	46.119	ENSCSEG00000012744	tnrc6c1	98	47.211	Cynoglossus_semilaevis
ENSUMAG00000013614	TNRC6C	98	51.116	ENSDARG00000076847	tnrc6c1	96	53.493	Danio_rerio
ENSUMAG00000013614	TNRC6C	99	86.115	ENSDNOG00000003247	TNRC6C	99	85.796	Dasypus_novemcinctus
ENSUMAG00000013614	TNRC6C	99	85.064	ENSDORG00000004558	Tnrc6c	100	85.858	Dipodomys_ordii
ENSUMAG00000013614	TNRC6C	83	78.411	ENSETEG00000005527	TNRC6C	89	78.621	Echinops_telfairi
ENSUMAG00000013614	TNRC6C	90	90.501	ENSEASG00005004799	TNRC6C	100	90.501	Equus_asinus_asinus
ENSUMAG00000013614	TNRC6C	99	90.496	ENSECAG00000012486	TNRC6C	99	90.392	Equus_caballus
ENSUMAG00000013614	TNRC6C	89	92.203	ENSEEUG00000010008	TNRC6C	96	92.203	Erinaceus_europaeus
ENSUMAG00000013614	TNRC6C	99	91.202	ENSFCAG00000028358	TNRC6C	100	90.995	Felis_catus
ENSUMAG00000013614	TNRC6C	90	83.955	ENSFALG00000000848	TNRC6C	100	83.616	Ficedula_albicollis
ENSUMAG00000013614	TNRC6C	92	87.572	ENSFDAG00000010368	TNRC6C	99	87.457	Fukomys_damarensis
ENSUMAG00000013614	TNRC6C	97	46.243	ENSFHEG00000002936	tnrc6c1	99	46.792	Fundulus_heteroclitus
ENSUMAG00000013614	TNRC6C	94	85.754	ENSGALG00000001725	TNRC6C	100	85.436	Gallus_gallus
ENSUMAG00000013614	TNRC6C	98	47.798	ENSGAFG00000019019	tnrc6c1	99	47.545	Gambusia_affinis
ENSUMAG00000013614	TNRC6C	72	51.008	ENSGACG00000012320	tnrc6c1	97	46.873	Gasterosteus_aculeatus
ENSUMAG00000013614	TNRC6C	93	85.469	ENSGAGG00000022043	TNRC6C	99	85.171	Gopherus_agassizii
ENSUMAG00000013614	TNRC6C	99	89.317	ENSGGOG00000011304	TNRC6C	100	88.665	Gorilla_gorilla
ENSUMAG00000013614	TNRC6C	98	48.202	ENSHBUG00000010846	tnrc6c1	98	51.158	Haplochromis_burtoni
ENSUMAG00000013614	TNRC6C	99	87.580	ENSHGLG00000004809	TNRC6C	99	87.302	Heterocephalus_glaber_female
ENSUMAG00000013614	TNRC6C	99	87.527	ENSHGLG00100012597	TNRC6C	99	87.513	Heterocephalus_glaber_male
ENSUMAG00000013614	TNRC6C	99	51.266	ENSIPUG00000000818	tnrc6c1	98	50.894	Ictalurus_punctatus
ENSUMAG00000013614	TNRC6C	99	87.003	ENSSTOG00000009101	TNRC6C	99	86.842	Ictidomys_tridecemlineatus
ENSUMAG00000013614	TNRC6C	99	85.927	ENSJJAG00000017055	Tnrc6c	99	85.283	Jaculus_jaculus
ENSUMAG00000013614	TNRC6C	99	46.640	ENSKMAG00000021023	tnrc6c1	99	46.823	Kryptolebias_marmoratus
ENSUMAG00000013614	TNRC6C	92	73.129	ENSLACG00000015283	TNRC6C	99	73.243	Latimeria_chalumnae
ENSUMAG00000013614	TNRC6C	99	54.088	ENSLOCG00000013377	tnrc6c1	99	54.086	Lepisosteus_oculatus
ENSUMAG00000013614	TNRC6C	99	88.995	ENSLAFG00000011122	TNRC6C	99	88.995	Loxodonta_africana
ENSUMAG00000013614	TNRC6C	99	89.688	ENSMFAG00000043943	TNRC6C	100	89.349	Macaca_fascicularis
ENSUMAG00000013614	TNRC6C	99	89.288	ENSMMUG00000011924	TNRC6C	100	88.948	Macaca_mulatta
ENSUMAG00000013614	TNRC6C	99	89.652	ENSMNEG00000030405	TNRC6C	100	88.889	Macaca_nemestrina
ENSUMAG00000013614	TNRC6C	99	89.652	ENSMLEG00000033436	TNRC6C	100	89.292	Mandrillus_leucophaeus
ENSUMAG00000013614	TNRC6C	81	51.958	ENSMAMG00000023613	tnrc6c1	97	49.884	Mastacembelus_armatus
ENSUMAG00000013614	TNRC6C	98	49.601	ENSMZEG00005010920	tnrc6c1	98	50.878	Maylandia_zebra
ENSUMAG00000013614	TNRC6C	99	77.720	ENSMGAG00000003906	TNRC6C	99	77.749	Meleagris_gallopavo
ENSUMAG00000013614	TNRC6C	90	86.844	ENSMAUG00000021618	Tnrc6c	100	86.962	Mesocricetus_auratus
ENSUMAG00000013614	TNRC6C	99	89.704	ENSMICG00000003952	TNRC6C	100	89.234	Microcebus_murinus
ENSUMAG00000013614	TNRC6C	99	88.145	ENSMOCG00000015879	Tnrc6c	99	88.131	Microtus_ochrogaster
ENSUMAG00000013614	TNRC6C	70	53.512	ENSMMOG00000005203	tnrc6c1	97	48.916	Mola_mola
ENSUMAG00000013614	TNRC6C	99	84.032	ENSMODG00000001785	TNRC6C	99	83.184	Monodelphis_domestica
ENSUMAG00000013614	TNRC6C	99	87.985	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	88.016	Mus_caroli
ENSUMAG00000013614	TNRC6C	99	87.507	ENSMUSG00000025571	Tnrc6c	99	87.557	Mus_musculus
ENSUMAG00000013614	TNRC6C	99	87.985	MGP_PahariEiJ_G0018593	Tnrc6c	99	88.016	Mus_pahari
ENSUMAG00000013614	TNRC6C	99	87.560	MGP_SPRETEiJ_G0018309	Tnrc6c	99	87.615	Mus_spretus
ENSUMAG00000013614	TNRC6C	99	91.819	ENSMPUG00000013348	TNRC6C	98	91.532	Mustela_putorius_furo
ENSUMAG00000013614	TNRC6C	99	81.050	ENSMLUG00000014431	TNRC6C	98	80.524	Myotis_lucifugus
ENSUMAG00000013614	TNRC6C	99	87.447	ENSNGAG00000012203	Tnrc6c	99	87.328	Nannospalax_galili
ENSUMAG00000013614	TNRC6C	93	47.826	ENSNBRG00000005344	tnrc6c1	98	51.294	Neolamprologus_brichardi
ENSUMAG00000013614	TNRC6C	99	87.827	ENSNLEG00000000047	TNRC6C	99	86.753	Nomascus_leucogenys
ENSUMAG00000013614	TNRC6C	86	83.516	ENSMEUG00000005104	TNRC6C	94	89.583	Notamacropus_eugenii
ENSUMAG00000013614	TNRC6C	90	87.920	ENSODEG00000012499	TNRC6C	100	88.097	Octodon_degus
ENSUMAG00000013614	TNRC6C	84	49.534	ENSONIG00000002210	tnrc6c1	96	50.272	Oreochromis_niloticus
ENSUMAG00000013614	TNRC6C	99	60.378	ENSOANG00000009758	-	99	59.969	Ornithorhynchus_anatinus
ENSUMAG00000013614	TNRC6C	85	76.626	ENSOCUG00000006122	TNRC6C	95	69.719	Oryctolagus_cuniculus
ENSUMAG00000013614	TNRC6C	92	47.480	ENSORLG00000009837	tnrc6c1	100	68.401	Oryzias_latipes
ENSUMAG00000013614	TNRC6C	92	47.140	ENSORLG00020016510	tnrc6c1	100	47.105	Oryzias_latipes_hni
ENSUMAG00000013614	TNRC6C	74	41.851	ENSORLG00015000171	tnrc6c1	98	41.748	Oryzias_latipes_hsok
ENSUMAG00000013614	TNRC6C	93	46.945	ENSOMEG00000000357	tnrc6c1	99	46.840	Oryzias_melastigma
ENSUMAG00000013614	TNRC6C	90	89.216	ENSOGAG00000007197	TNRC6C	100	89.331	Otolemur_garnettii
ENSUMAG00000013614	TNRC6C	96	85.240	ENSOARG00000006041	TNRC6C	98	84.745	Ovis_aries
ENSUMAG00000013614	TNRC6C	99	89.885	ENSPPAG00000027160	TNRC6C	100	89.389	Pan_paniscus
ENSUMAG00000013614	TNRC6C	99	91.307	ENSPPRG00000018881	TNRC6C	100	91.112	Panthera_pardus
ENSUMAG00000013614	TNRC6C	91	80.714	ENSPTIG00000008791	TNRC6C	91	88.108	Panthera_tigris_altaica
ENSUMAG00000013614	TNRC6C	99	89.808	ENSPTRG00000009699	TNRC6C	100	89.657	Pan_troglodytes
ENSUMAG00000013614	TNRC6C	99	89.704	ENSPANG00000019994	TNRC6C	100	89.105	Papio_anubis
ENSUMAG00000013614	TNRC6C	87	51.805	ENSPKIG00000005428	tnrc6c1	98	50.256	Paramormyrops_kingsleyae
ENSUMAG00000013614	TNRC6C	92	83.696	ENSPSIG00000018069	TNRC6C	99	83.638	Pelodiscus_sinensis
ENSUMAG00000013614	TNRC6C	59	58.140	ENSPMGG00000022911	tnrc6c1	97	63.265	Periophthalmus_magnuspinnatus
ENSUMAG00000013614	TNRC6C	99	87.766	ENSPEMG00000009785	Tnrc6c	99	87.553	Peromyscus_maniculatus_bairdii
ENSUMAG00000013614	TNRC6C	52	83.709	ENSPCIG00000017421	-	99	83.299	Phascolarctos_cinereus
ENSUMAG00000013614	TNRC6C	97	47.672	ENSPFOG00000012560	tnrc6c1	97	52.738	Poecilia_formosa
ENSUMAG00000013614	TNRC6C	87	50.000	ENSPLAG00000021055	tnrc6c1	97	48.851	Poecilia_latipinna
ENSUMAG00000013614	TNRC6C	99	89.756	ENSPPYG00000008679	TNRC6C	98	89.528	Pongo_abelii
ENSUMAG00000013614	TNRC6C	82	94.076	ENSPCAG00000012510	TNRC6C	88	94.076	Procavia_capensis
ENSUMAG00000013614	TNRC6C	90	90.155	ENSPCOG00000021451	TNRC6C	100	90.155	Propithecus_coquereli
ENSUMAG00000013614	TNRC6C	89	94.915	ENSPVAG00000002008	TNRC6C	95	94.915	Pteropus_vampyrus
ENSUMAG00000013614	TNRC6C	93	49.668	ENSPNYG00000014477	tnrc6c1	98	51.191	Pundamilia_nyererei
ENSUMAG00000013614	TNRC6C	90	87.507	ENSRNOG00000022395	Tnrc6c	100	87.566	Rattus_norvegicus
ENSUMAG00000013614	TNRC6C	99	88.860	ENSRBIG00000027777	TNRC6C	100	89.234	Rhinopithecus_bieti
ENSUMAG00000013614	TNRC6C	99	89.652	ENSRROG00000042912	TNRC6C	100	89.292	Rhinopithecus_roxellana
ENSUMAG00000013614	TNRC6C	99	88.976	ENSSBOG00000023981	TNRC6C	100	88.716	Saimiri_boliviensis_boliviensis
ENSUMAG00000013614	TNRC6C	93	55.089	ENSSFOG00015006475	tnrc6c1	99	49.488	Scleropages_formosus
ENSUMAG00000013614	TNRC6C	81	57.234	ENSSFOG00015004735	-	99	61.097	Scleropages_formosus
ENSUMAG00000013614	TNRC6C	94	46.357	ENSSMAG00000012761	tnrc6c1	99	48.635	Scophthalmus_maximus
ENSUMAG00000013614	TNRC6C	94	48.698	ENSSDUG00000002366	tnrc6c1	99	49.161	Seriola_dumerili
ENSUMAG00000013614	TNRC6C	84	48.335	ENSSLDG00000025613	tnrc6c1	97	49.137	Seriola_lalandi_dorsalis
ENSUMAG00000013614	TNRC6C	85	93.277	ENSSARG00000006816	TNRC6C	91	93.277	Sorex_araneus
ENSUMAG00000013614	TNRC6C	80	84.525	ENSSPUG00000007341	TNRC6C	98	84.594	Sphenodon_punctatus
ENSUMAG00000013614	TNRC6C	71	52.147	ENSSPAG00000014977	tnrc6c1	98	47.408	Stegastes_partitus
ENSUMAG00000013614	TNRC6C	90	84.496	ENSSSCG00000034373	TNRC6C	100	87.760	Sus_scrofa
ENSUMAG00000013614	TNRC6C	92	85.535	ENSTGUG00000007733	TNRC6C	99	85.592	Taeniopygia_guttata
ENSUMAG00000013614	TNRC6C	71	53.024	ENSTRUG00000011685	tnrc6c1	100	47.674	Takifugu_rubripes
ENSUMAG00000013614	TNRC6C	88	52.635	ENSTNIG00000005273	tnrc6c1	100	58.228	Tetraodon_nigroviridis
ENSUMAG00000013614	TNRC6C	57	90.234	ENSTBEG00000005046	TNRC6C	95	90.234	Tupaia_belangeri
ENSUMAG00000013614	TNRC6C	92	89.555	ENSTTRG00000010828	TNRC6C	99	89.931	Tursiops_truncatus
ENSUMAG00000013614	TNRC6C	90	95.336	ENSVVUG00000015268	TNRC6C	100	95.336	Vulpes_vulpes
ENSUMAG00000013614	TNRC6C	90	72.956	ENSXETG00000019470	tnrc6c	100	72.255	Xenopus_tropicalis
ENSUMAG00000013614	TNRC6C	97	48.338	ENSXMAG00000025971	tnrc6c1	99	48.755	Xiphophorus_maculatus