EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000013907 (Gene tree)
Gene ID: 103659547
Gene Symbol: SSB
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 10836 bases
Position: chrKK498562.1:18338555-18349390
Accession: 103659547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000018933	RRM_1	PF00076.22	9e-15	1	1
ENSUMAP00000018933	RRM_3	PF08777.11	1.8e-31	1	1
ENSUMAP00000018933	La	PF05383.17	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000022400	SSB-201	1614	XM_008687101	ENSUMAP00000018933	406 (aa)	XP_008685323	UPI0004E0196A

Gene Model

Click here to download ENSUMAG00000013907's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000013907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000013907	SSB	100	94.377	ENSG00000138385	SSB	100	97.826	Homo_sapiens
ENSUMAG00000013907	SSB	98	54.591	ENSAPOG00000003448	ssb	100	55.037	Acanthochromis_polyacanthus
ENSUMAG00000013907	SSB	100	95.952	ENSAMEG00000010507	SSB	100	95.952	Ailuropoda_melanoleuca
ENSUMAG00000013907	SSB	92	58.289	ENSACIG00000001738	ssb	97	58.133	Amphilophus_citrinellus
ENSUMAG00000013907	SSB	98	54.839	ENSAOCG00000020398	ssb	100	55.528	Amphiprion_ocellaris
ENSUMAG00000013907	SSB	98	55.087	ENSAPEG00000020395	ssb	100	55.774	Amphiprion_percula
ENSUMAG00000013907	SSB	99	56.511	ENSATEG00000016884	ssb	100	57.002	Anabas_testudineus
ENSUMAG00000013907	SSB	100	70.519	ENSAPLG00000006109	SSB	100	72.000	Anas_platyrhynchos
ENSUMAG00000013907	SSB	100	67.883	ENSACAG00000017008	SSB	99	67.883	Anolis_carolinensis
ENSUMAG00000013907	SSB	100	84.975	ENSANAG00000027195	-	100	84.975	Aotus_nancymaae
ENSUMAG00000013907	SSB	99	54.321	ENSACLG00000010798	ssb	100	54.074	Astatotilapia_calliptera
ENSUMAG00000013907	SSB	98	55.147	ENSAMXG00000012606	ssb	100	56.145	Astyanax_mexicanus
ENSUMAG00000013907	SSB	100	95.074	ENSBTAG00000008716	SSB	100	95.074	Bos_taurus
ENSUMAG00000013907	SSB	73	35.099	WBGene00016653	C44E4.4	85	33.041	Caenorhabditis_elegans
ENSUMAG00000013907	SSB	100	94.089	ENSCJAG00000045073	SSB	100	94.089	Callithrix_jacchus
ENSUMAG00000013907	SSB	100	98.276	ENSCAFG00000012418	SSB	100	98.276	Canis_familiaris
ENSUMAG00000013907	SSB	100	98.276	ENSCAFG00020002900	SSB	100	98.276	Canis_lupus_dingo
ENSUMAG00000013907	SSB	100	95.074	ENSCHIG00000022624	-	100	95.074	Capra_hircus
ENSUMAG00000013907	SSB	100	88.916	ENSCHIG00000022196	-	100	88.916	Capra_hircus
ENSUMAG00000013907	SSB	100	95.074	ENSTSYG00000000097	SSB	100	95.074	Carlito_syrichta
ENSUMAG00000013907	SSB	100	95.813	ENSCPOG00000003338	SSB	100	95.813	Cavia_porcellus
ENSUMAG00000013907	SSB	100	94.581	ENSCCAG00000035147	SSB	100	94.581	Cebus_capucinus
ENSUMAG00000013907	SSB	100	74.384	ENSCATG00000036701	SSB	100	74.384	Cercocebus_atys
ENSUMAG00000013907	SSB	100	69.951	ENSCATG00000042909	-	100	69.951	Cercocebus_atys
ENSUMAG00000013907	SSB	100	96.059	ENSCLAG00000015617	-	100	96.059	Chinchilla_lanigera
ENSUMAG00000013907	SSB	100	94.581	ENSCSAG00000015200	SSB	89	94.581	Chlorocebus_sabaeus
ENSUMAG00000013907	SSB	98	86.432	ENSCSAG00000018390	-	100	86.432	Chlorocebus_sabaeus
ENSUMAG00000013907	SSB	100	95.074	ENSCHOG00000007763	SSB	100	95.074	Choloepus_hoffmanni
ENSUMAG00000013907	SSB	100	78.780	ENSCPBG00000006519	SSB	100	79.512	Chrysemys_picta_bellii
ENSUMAG00000013907	SSB	100	94.828	ENSCANG00000027695	SSB	100	94.828	Colobus_angolensis_palliatus
ENSUMAG00000013907	SSB	100	80.542	ENSCANG00000033240	-	100	80.542	Colobus_angolensis_palliatus
ENSUMAG00000013907	SSB	98	74.687	ENSCANG00000028838	-	95	74.687	Colobus_angolensis_palliatus
ENSUMAG00000013907	SSB	100	79.075	ENSCGRG00001024831	Ssb	100	80.292	Cricetulus_griseus_chok1gshd
ENSUMAG00000013907	SSB	100	79.075	ENSCGRG00000005387	Ssb	100	80.292	Cricetulus_griseus_crigri
ENSUMAG00000013907	SSB	98	56.359	ENSCSEG00000011599	ssb	99	57.107	Cynoglossus_semilaevis
ENSUMAG00000013907	SSB	99	57.353	ENSCVAG00000021558	ssb	100	57.843	Cyprinodon_variegatus
ENSUMAG00000013907	SSB	98	56.824	ENSDARG00000029252	ssb	99	56.824	Danio_rerio
ENSUMAG00000013907	SSB	100	94.828	ENSDNOG00000013450	SSB	100	94.828	Dasypus_novemcinctus
ENSUMAG00000013907	SSB	100	84.466	ENSDORG00000005543	Ssb	100	84.466	Dipodomys_ordii
ENSUMAG00000013907	SSB	83	33.811	FBgn0011638	La	92	33.684	Drosophila_melanogaster
ENSUMAG00000013907	SSB	58	94.030	ENSETEG00000004614	-	61	94.030	Echinops_telfairi
ENSUMAG00000013907	SSB	96	47.583	ENSEBUG00000001237	ssb	96	47.837	Eptatretus_burgeri
ENSUMAG00000013907	SSB	100	96.552	ENSEASG00005022835	SSB	100	96.552	Equus_asinus_asinus
ENSUMAG00000013907	SSB	100	96.798	ENSECAG00000018495	SSB	100	96.798	Equus_caballus
ENSUMAG00000013907	SSB	75	75.817	ENSEEUG00000008077	SSB	78	75.817	Erinaceus_europaeus
ENSUMAG00000013907	SSB	98	58.853	ENSELUG00000020929	ssb	100	59.360	Esox_lucius
ENSUMAG00000013907	SSB	100	97.537	ENSFCAG00000011601	SSB	100	97.537	Felis_catus
ENSUMAG00000013907	SSB	100	75.735	ENSFALG00000000930	SSB	100	75.735	Ficedula_albicollis
ENSUMAG00000013907	SSB	100	95.074	ENSFDAG00000000598	SSB	100	95.074	Fukomys_damarensis
ENSUMAG00000013907	SSB	72	55.518	ENSFHEG00000003268	ssb	95	55.556	Fundulus_heteroclitus
ENSUMAG00000013907	SSB	97	54.950	ENSGMOG00000002664	ssb	99	55.446	Gadus_morhua
ENSUMAG00000013907	SSB	100	75.306	ENSGALG00000009677	SSB	100	75.306	Gallus_gallus
ENSUMAG00000013907	SSB	99	55.774	ENSGAFG00000002749	ssb	100	56.020	Gambusia_affinis
ENSUMAG00000013907	SSB	99	53.995	ENSGACG00000005107	ssb	100	54.348	Gasterosteus_aculeatus
ENSUMAG00000013907	SSB	100	78.049	ENSGAGG00000007807	SSB	100	78.780	Gopherus_agassizii
ENSUMAG00000013907	SSB	100	78.325	ENSGGOG00000024891	-	100	78.325	Gorilla_gorilla
ENSUMAG00000013907	SSB	63	90.708	ENSGGOG00000023471	-	100	90.708	Gorilla_gorilla
ENSUMAG00000013907	SSB	99	53.827	ENSHBUG00000006584	ssb	100	53.580	Haplochromis_burtoni
ENSUMAG00000013907	SSB	100	86.207	ENSHGLG00000005832	-	100	86.207	Heterocephalus_glaber_female
ENSUMAG00000013907	SSB	100	93.947	ENSHGLG00000017580	-	100	93.947	Heterocephalus_glaber_female
ENSUMAG00000013907	SSB	100	87.010	ENSHGLG00000004478	-	100	87.010	Heterocephalus_glaber_female
ENSUMAG00000013907	SSB	100	93.947	ENSHGLG00100003084	-	100	93.947	Heterocephalus_glaber_male
ENSUMAG00000013907	SSB	100	81.773	ENSHGLG00100008767	-	100	81.773	Heterocephalus_glaber_male
ENSUMAG00000013907	SSB	98	54.271	ENSHCOG00000019011	ssb	99	54.523	Hippocampus_comes
ENSUMAG00000013907	SSB	97	57.214	ENSIPUG00000003681	SSB	99	57.673	Ictalurus_punctatus
ENSUMAG00000013907	SSB	100	95.567	ENSSTOG00000008416	SSB	100	95.567	Ictidomys_tridecemlineatus
ENSUMAG00000013907	SSB	100	79.481	ENSJJAG00000023158	-	100	79.481	Jaculus_jaculus
ENSUMAG00000013907	SSB	99	67.742	ENSJJAG00000016250	-	99	67.742	Jaculus_jaculus
ENSUMAG00000013907	SSB	99	56.020	ENSKMAG00000017317	ssb	100	56.511	Kryptolebias_marmoratus
ENSUMAG00000013907	SSB	98	54.094	ENSLBEG00000017345	ssb	100	55.037	Labrus_bergylta
ENSUMAG00000013907	SSB	99	65.196	ENSLACG00000014056	SSB	99	68.704	Latimeria_chalumnae
ENSUMAG00000013907	SSB	98	66.334	ENSLOCG00000007933	ssb	99	66.833	Lepisosteus_oculatus
ENSUMAG00000013907	SSB	100	89.100	ENSLAFG00000000867	-	100	89.336	Loxodonta_africana
ENSUMAG00000013907	SSB	74	70.199	ENSLAFG00000026721	-	99	70.199	Loxodonta_africana
ENSUMAG00000013907	SSB	100	78.818	ENSLAFG00000028909	-	100	78.818	Loxodonta_africana
ENSUMAG00000013907	SSB	88	81.513	ENSMFAG00000041478	-	100	81.513	Macaca_fascicularis
ENSUMAG00000013907	SSB	100	94.828	ENSMFAG00000039066	SSB	100	94.828	Macaca_fascicularis
ENSUMAG00000013907	SSB	100	94.828	ENSMMUG00000023051	SSB	100	94.828	Macaca_mulatta
ENSUMAG00000013907	SSB	99	66.089	ENSMMUG00000039889	-	100	66.337	Macaca_mulatta
ENSUMAG00000013907	SSB	100	80.049	ENSMMUG00000011724	-	97	80.049	Macaca_mulatta
ENSUMAG00000013907	SSB	88	81.513	ENSMNEG00000034698	-	100	81.513	Macaca_nemestrina
ENSUMAG00000013907	SSB	100	82.725	ENSMNEG00000028321	SSB	85	99.130	Macaca_nemestrina
ENSUMAG00000013907	SSB	100	68.227	ENSMLEG00000042644	-	100	68.227	Mandrillus_leucophaeus
ENSUMAG00000013907	SSB	100	94.828	ENSMLEG00000035717	SSB	100	94.828	Mandrillus_leucophaeus
ENSUMAG00000013907	SSB	99	58.231	ENSMAMG00000004800	ssb	100	58.722	Mastacembelus_armatus
ENSUMAG00000013907	SSB	99	54.321	ENSMZEG00005005749	ssb	100	54.074	Maylandia_zebra
ENSUMAG00000013907	SSB	100	75.306	ENSMGAG00000010328	SSB	100	75.306	Meleagris_gallopavo
ENSUMAG00000013907	SSB	99	95.545	ENSMICG00000028252	-	99	95.545	Microcebus_murinus
ENSUMAG00000013907	SSB	99	86.139	ENSMICG00000033304	-	93	92.033	Microcebus_murinus
ENSUMAG00000013907	SSB	100	78.125	ENSMODG00000008227	-	100	79.087	Monodelphis_domestica
ENSUMAG00000013907	SSB	100	67.241	ENSMODG00000019271	-	100	53.155	Monodelphis_domestica
ENSUMAG00000013907	SSB	85	80.503	ENSMODG00000007027	-	99	80.503	Monodelphis_domestica
ENSUMAG00000013907	SSB	90	58.583	ENSMALG00000008045	ssb	90	58.621	Monopterus_albus
ENSUMAG00000013907	SSB	100	77.251	MGP_CAROLIEiJ_G0023629	-	100	91.848	Mus_caroli
ENSUMAG00000013907	SSB	100	76.540	ENSMUSG00000068882	Ssb	100	91.848	Mus_musculus
ENSUMAG00000013907	SSB	100	76.540	MGP_PahariEiJ_G0025081	-	100	91.848	Mus_pahari
ENSUMAG00000013907	SSB	100	76.540	MGP_SPRETEiJ_G0024551	Ssb	100	91.848	Mus_spretus
ENSUMAG00000013907	SSB	100	98.276	ENSMPUG00000000785	SSB	100	98.276	Mustela_putorius_furo
ENSUMAG00000013907	SSB	100	90.261	ENSMLUG00000016316	SSB	100	90.261	Myotis_lucifugus
ENSUMAG00000013907	SSB	99	54.568	ENSNBRG00000012661	ssb	100	54.321	Neolamprologus_brichardi
ENSUMAG00000013907	SSB	100	68.227	ENSNLEG00000028754	-	100	68.227	Nomascus_leucogenys
ENSUMAG00000013907	SSB	100	95.074	ENSNLEG00000004958	SSB	100	95.074	Nomascus_leucogenys
ENSUMAG00000013907	SSB	61	87.903	ENSMEUG00000001650	-	100	87.903	Notamacropus_eugenii
ENSUMAG00000013907	SSB	72	73.540	ENSOPRG00000008475	-	100	73.540	Ochotona_princeps
ENSUMAG00000013907	SSB	93	88.918	ENSODEG00000004202	-	100	88.918	Octodon_degus
ENSUMAG00000013907	SSB	99	54.321	ENSONIG00000008776	ssb	100	54.074	Oreochromis_niloticus
ENSUMAG00000013907	SSB	100	83.498	ENSOANG00000008543	SSB	100	83.498	Ornithorhynchus_anatinus
ENSUMAG00000013907	SSB	100	94.335	ENSOCUG00000010396	SSB	100	94.335	Oryctolagus_cuniculus
ENSUMAG00000013907	SSB	99	57.248	ENSORLG00000017208	ssb	100	57.494	Oryzias_latipes
ENSUMAG00000013907	SSB	99	57.002	ENSORLG00020022574	ssb	100	57.248	Oryzias_latipes_hni
ENSUMAG00000013907	SSB	99	57.002	ENSORLG00015016592	ssb	100	57.248	Oryzias_latipes_hsok
ENSUMAG00000013907	SSB	98	56.716	ENSOMEG00000003193	ssb	100	57.635	Oryzias_melastigma
ENSUMAG00000013907	SSB	100	89.835	ENSOGAG00000029768	SSB	100	89.835	Otolemur_garnettii
ENSUMAG00000013907	SSB	100	94.581	ENSOARG00000002906	SSB	100	94.581	Ovis_aries
ENSUMAG00000013907	SSB	97	73.924	ENSPPAG00000006189	-	96	77.748	Pan_paniscus
ENSUMAG00000013907	SSB	100	94.377	ENSPPAG00000042673	SSB	100	94.377	Pan_paniscus
ENSUMAG00000013907	SSB	100	77.340	ENSPPAG00000032427	-	100	86.822	Pan_paniscus
ENSUMAG00000013907	SSB	100	97.537	ENSPPRG00000006599	SSB	100	97.537	Panthera_pardus
ENSUMAG00000013907	SSB	100	97.291	ENSPTIG00000011021	SSB	97	97.291	Panthera_tigris_altaica
ENSUMAG00000013907	SSB	100	94.377	ENSPTRG00000012620	SSB	100	94.377	Pan_troglodytes
ENSUMAG00000013907	SSB	100	73.645	ENSPTRG00000042880	-	100	73.645	Pan_troglodytes
ENSUMAG00000013907	SSB	100	67.488	ENSPANG00000034126	-	100	67.980	Papio_anubis
ENSUMAG00000013907	SSB	100	94.828	ENSPANG00000007440	SSB	100	94.828	Papio_anubis
ENSUMAG00000013907	SSB	98	66.416	ENSPANG00000031877	-	95	66.416	Papio_anubis
ENSUMAG00000013907	SSB	98	62.189	ENSPKIG00000019325	ssb	99	63.054	Paramormyrops_kingsleyae
ENSUMAG00000013907	SSB	100	75.610	ENSPSIG00000002265	SSB	93	76.341	Pelodiscus_sinensis
ENSUMAG00000013907	SSB	85	54.545	ENSPMGG00000020075	ssb	93	54.830	Periophthalmus_magnuspinnatus
ENSUMAG00000013907	SSB	81	50.303	ENSPMAG00000002982	ssb	89	48.831	Petromyzon_marinus
ENSUMAG00000013907	SSB	100	83.292	ENSPCIG00000028591	-	100	83.784	Phascolarctos_cinereus
ENSUMAG00000013907	SSB	99	57.002	ENSPFOG00000009650	ssb	100	57.248	Poecilia_formosa
ENSUMAG00000013907	SSB	99	56.757	ENSPLAG00000020498	ssb	100	57.002	Poecilia_latipinna
ENSUMAG00000013907	SSB	99	56.511	ENSPMEG00000001051	ssb	100	57.002	Poecilia_mexicana
ENSUMAG00000013907	SSB	94	57.292	ENSPREG00000003708	ssb	99	57.552	Poecilia_reticulata
ENSUMAG00000013907	SSB	100	95.074	ENSPPYG00000012919	SSB	100	95.074	Pongo_abelii
ENSUMAG00000013907	SSB	95	89.583	ENSPCAG00000010276	SSB	100	89.583	Procavia_capensis
ENSUMAG00000013907	SSB	100	83.744	ENSPCOG00000023189	-	100	83.744	Propithecus_coquereli
ENSUMAG00000013907	SSB	100	91.872	ENSPCOG00000015741	-	100	91.872	Propithecus_coquereli
ENSUMAG00000013907	SSB	87	96.045	ENSPVAG00000006615	SSB	100	96.045	Pteropus_vampyrus
ENSUMAG00000013907	SSB	99	54.321	ENSPNYG00000006444	ssb	100	54.074	Pundamilia_nyererei
ENSUMAG00000013907	SSB	98	56.897	ENSPNAG00000011708	ssb	100	57.524	Pygocentrus_nattereri
ENSUMAG00000013907	SSB	100	77.488	ENSRNOG00000007998	Ssb	100	77.488	Rattus_norvegicus
ENSUMAG00000013907	SSB	100	77.995	ENSRNOG00000011606	AABR07061825.1	100	77.995	Rattus_norvegicus
ENSUMAG00000013907	SSB	100	68.796	ENSRBIG00000029918	-	100	68.796	Rhinopithecus_bieti
ENSUMAG00000013907	SSB	89	86.501	ENSRBIG00000041608	-	98	86.501	Rhinopithecus_bieti
ENSUMAG00000013907	SSB	100	78.589	ENSRBIG00000041972	SSB	88	99.130	Rhinopithecus_bieti
ENSUMAG00000013907	SSB	94	78.947	ENSRBIG00000041232	-	98	78.947	Rhinopithecus_bieti
ENSUMAG00000013907	SSB	98	80.101	ENSRROG00000031684	-	100	80.101	Rhinopithecus_roxellana
ENSUMAG00000013907	SSB	100	78.378	ENSRROG00000007149	-	100	78.378	Rhinopithecus_roxellana
ENSUMAG00000013907	SSB	100	94.828	ENSRROG00000040346	SSB	100	94.828	Rhinopithecus_roxellana
ENSUMAG00000013907	SSB	98	85.037	ENSRROG00000034102	-	98	84.962	Rhinopithecus_roxellana
ENSUMAG00000013907	SSB	100	95.074	ENSSBOG00000027204	SSB	100	95.074	Saimiri_boliviensis_boliviensis
ENSUMAG00000013907	SSB	100	82.310	ENSSHAG00000018062	SSB	100	83.784	Sarcophilus_harrisii
ENSUMAG00000013907	SSB	99	63.814	ENSSFOG00015000550	ssb	100	64.303	Scleropages_formosus
ENSUMAG00000013907	SSB	98	53.500	ENSSMAG00000013885	ssb	99	57.487	Scophthalmus_maximus
ENSUMAG00000013907	SSB	99	56.757	ENSSDUG00000020117	ssb	100	57.002	Seriola_dumerili
ENSUMAG00000013907	SSB	99	54.703	ENSSLDG00000002525	ssb	100	54.208	Seriola_lalandi_dorsalis
ENSUMAG00000013907	SSB	95	85.417	ENSSARG00000007747	SSB	100	85.417	Sorex_araneus
ENSUMAG00000013907	SSB	100	77.206	ENSSPUG00000012112	SSB	100	77.206	Sphenodon_punctatus
ENSUMAG00000013907	SSB	98	55.087	ENSSPAG00000005696	ssb	100	55.774	Stegastes_partitus
ENSUMAG00000013907	SSB	98	78.392	ENSSSCG00000015938	SSB	98	78.947	Sus_scrofa
ENSUMAG00000013907	SSB	100	74.572	ENSTGUG00000007942	SSB	100	75.366	Taeniopygia_guttata
ENSUMAG00000013907	SSB	99	57.037	ENSTRUG00000017839	ssb	100	57.635	Takifugu_rubripes
ENSUMAG00000013907	SSB	90	59.511	ENSTNIG00000000915	ssb	100	59.511	Tetraodon_nigroviridis
ENSUMAG00000013907	SSB	83	99.130	ENSTBEG00000009056	SSB	82	99.130	Tupaia_belangeri
ENSUMAG00000013907	SSB	100	95.320	ENSTTRG00000002152	SSB	100	95.320	Tursiops_truncatus
ENSUMAG00000013907	SSB	93	100.000	ENSUAMG00000027833	SSB	99	100.000	Ursus_americanus
ENSUMAG00000013907	SSB	100	94.581	ENSVPAG00000007183	SSB	100	94.581	Vicugna_pacos
ENSUMAG00000013907	SSB	100	98.276	ENSVVUG00000016573	SSB	78	98.276	Vulpes_vulpes
ENSUMAG00000013907	SSB	100	58.879	ENSXETG00000025402	ssb	100	60.606	Xenopus_tropicalis
ENSUMAG00000013907	SSB	94	55.091	ENSXCOG00000019109	ssb	99	55.352	Xiphophorus_couchianus
ENSUMAG00000013907	SSB	99	56.020	ENSXMAG00000004888	ssb	100	56.265	Xiphophorus_maculatus