EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000013935 (Gene tree)
Gene ID: 103657933
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 18327 bases
Position: chrKK498539.1:3663927-3682253
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000019086	RRM_1	PF00076.22	6e-06	1	1
ENSUMAP00000019082	RRM_1	PF00076.22	6.1e-06	1	1
ENSUMAP00000019077	RRM_1	PF00076.22	6.4e-06	1	1
ENSUMAP00000019075	RRM_1	PF00076.22	6.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000022584	-	4101	-	ENSUMAP00000019086	1366 (aa)	-	-
ENSUMAT00000022577	-	4119	-	ENSUMAP00000019082	1372 (aa)	-	-
ENSUMAT00000022570	-	4332	-	ENSUMAP00000019075	1443 (aa)	-	-
ENSUMAT00000022572	-	4251	-	ENSUMAP00000019077	1416 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000013935's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000013935's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000013935	-	88	90.909	ENSAMEG00000007540	-	66	95.575	Ailuropoda_melanoleuca
ENSUMAG00000013935	-	94	96.825	ENSANAG00000021698	-	76	96.825	Aotus_nancymaae
ENSUMAG00000013935	-	94	96.825	ENSTSYG00000014425	-	78	96.825	Carlito_syrichta
ENSUMAG00000013935	-	88	96.947	ENSCAPG00000006491	-	69	96.947	Cavia_aperea
ENSUMAG00000013935	-	61	87.500	ENSCPBG00000010830	-	53	90.756	Chrysemys_picta_bellii
ENSUMAG00000013935	-	94	96.825	ENSCANG00000038478	-	75	96.825	Colobus_angolensis_palliatus
ENSUMAG00000013935	-	69	96.635	ENSDNOG00000025514	-	91	96.635	Dasypus_novemcinctus
ENSUMAG00000013935	-	70	96.000	ENSETEG00000014170	-	57	96.000	Echinops_telfairi
ENSUMAG00000013935	-	94	97.619	ENSEASG00005011195	-	77	97.619	Equus_asinus_asinus
ENSUMAG00000013935	-	94	98.413	ENSECAG00000015162	SETD1A	78	98.473	Equus_caballus
ENSUMAG00000013935	-	63	87.023	ENSGAGG00000010781	-	50	90.756	Gopherus_agassizii
ENSUMAG00000013935	-	92	96.183	ENSHGLG00000014238	-	74	96.183	Heterocephalus_glaber_female
ENSUMAG00000013935	-	91	94.615	ENSHGLG00100010551	-	81	94.697	Heterocephalus_glaber_male
ENSUMAG00000013935	-	94	96.825	ENSMNEG00000032572	-	76	96.825	Macaca_nemestrina
ENSUMAG00000013935	-	92	96.947	ENSMAUG00000008959	-	74	96.947	Mesocricetus_auratus
ENSUMAG00000013935	-	92	95.238	ENSMODG00000001726	-	79	95.420	Monodelphis_domestica
ENSUMAG00000013935	-	91	96.825	MGP_CAROLIEiJ_G0030519	-	100	98.980	Mus_caroli
ENSUMAG00000013935	-	91	96.825	ENSMUSG00000042308	Setd1a	100	98.469	Mus_musculus
ENSUMAG00000013935	-	91	96.825	MGP_PahariEiJ_G0013726	-	100	98.980	Mus_pahari
ENSUMAG00000013935	-	91	96.825	MGP_SPRETEiJ_G0031633	Setd1a	100	97.959	Mus_spretus
ENSUMAG00000013935	-	86	98.473	ENSMPUG00000011867	-	53	98.473	Mustela_putorius_furo
ENSUMAG00000013935	-	78	92.481	ENSMLUG00000027303	-	60	92.481	Myotis_lucifugus
ENSUMAG00000013935	-	94	96.825	ENSNLEG00000016072	-	75	96.825	Nomascus_leucogenys
ENSUMAG00000013935	-	93	95.238	ENSMEUG00000003396	-	77	95.238	Notamacropus_eugenii
ENSUMAG00000013935	-	93	97.619	ENSOPRG00000016034	-	76	97.710	Ochotona_princeps
ENSUMAG00000013935	-	61	92.308	ENSOANG00000013155	-	68	79.814	Ornithorhynchus_anatinus
ENSUMAG00000013935	-	92	77.419	ENSOGAG00000028006	-	74	76.800	Otolemur_garnettii
ENSUMAG00000013935	-	88	97.619	ENSOARG00000008207	-	66	97.710	Ovis_aries
ENSUMAG00000013935	-	91	91.267	ENSPPAG00000030470	-	80	96.825	Pan_paniscus
ENSUMAG00000013935	-	94	98.425	ENSPTIG00000010871	-	79	98.425	Panthera_tigris_altaica
ENSUMAG00000013935	-	67	90.756	ENSPSIG00000005027	-	57	90.756	Pelodiscus_sinensis
ENSUMAG00000013935	-	93	95.420	ENSPCIG00000016725	-	76	95.420	Phascolarctos_cinereus
ENSUMAG00000013935	-	84	95.513	ENSPPYG00000007296	-	74	94.551	Pongo_abelii
ENSUMAG00000013935	-	86	96.947	ENSPCAG00000014351	-	75	96.947	Procavia_capensis
ENSUMAG00000013935	-	88	99.061	ENSPVAG00000011049	-	75	99.061	Pteropus_vampyrus
ENSUMAG00000013935	-	92	96.825	ENSRBIG00000033047	-	78	96.825	Rhinopithecus_bieti
ENSUMAG00000013935	-	94	95.192	ENSRROG00000040062	-	82	96.825	Rhinopithecus_roxellana
ENSUMAG00000013935	-	93	95.238	ENSSHAG00000010784	-	76	95.385	Sarcophilus_harrisii
ENSUMAG00000013935	-	80	97.600	ENSSARG00000005591	-	72	97.600	Sorex_araneus
ENSUMAG00000013935	-	64	76.866	ENSTNIG00000014930	setd1a	63	68.790	Tetraodon_nigroviridis
ENSUMAG00000013935	-	70	95.652	ENSTBEG00000009714	-	57	95.652	Tupaia_belangeri
ENSUMAG00000013935	-	93	98.355	ENSVVUG00000027687	-	75	98.355	Vulpes_vulpes