EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000014275 (Gene tree)
Gene ID: 103660975
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 19750 bases
Position: chrKK498573.1:1775491-1795240
Accession: 13244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000019527	MA3	PF02847.17	6.6e-25	1	1
ENSUMAP00000019517	MA3	PF02847.17	7.6e-25	1	1
ENSUMAP00000019511	MA3	PF02847.17	1.2e-24	1	1
ENSUMAP00000019527	MIF4G	PF02854.19	5.7e-17	1	1
ENSUMAP00000019517	MIF4G	PF02854.19	6.9e-17	1	1
ENSUMAP00000019511	MIF4G	PF02854.19	8.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000023082	NOM1-202	2238	-	ENSUMAP00000019517	745 (aa)	-	-
ENSUMAT00000023076	NOM1-201	2436	-	ENSUMAP00000019511	811 (aa)	-	-
ENSUMAT00000023093	NOM1-203	2076	-	ENSUMAP00000019527	691 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000014275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000014275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000014275	NOM1	95	78.070	ENSG00000146909	NOM1	85	76.478	Homo_sapiens
ENSUMAG00000014275	NOM1	93	66.229	ENSAPOG00000012073	nom1	87	56.528	Acanthochromis_polyacanthus
ENSUMAG00000014275	NOM1	96	96.229	ENSAMEG00000001412	NOM1	99	96.229	Ailuropoda_melanoleuca
ENSUMAG00000014275	NOM1	78	67.188	ENSACIG00000018050	nom1	77	67.273	Amphilophus_citrinellus
ENSUMAG00000014275	NOM1	71	64.540	ENSAOCG00000006229	nom1	86	56.739	Amphiprion_ocellaris
ENSUMAG00000014275	NOM1	77	65.348	ENSAPEG00000015994	nom1	87	56.989	Amphiprion_percula
ENSUMAG00000014275	NOM1	96	60.624	ENSATEG00000005405	nom1	81	60.746	Anabas_testudineus
ENSUMAG00000014275	NOM1	92	61.963	ENSAPLG00000006585	NOM1	99	62.215	Anas_platyrhynchos
ENSUMAG00000014275	NOM1	94	58.300	ENSACAG00000011192	NOM1	88	58.103	Anolis_carolinensis
ENSUMAG00000014275	NOM1	97	55.556	ENSACLG00000000033	nom1	86	55.020	Astatotilapia_calliptera
ENSUMAG00000014275	NOM1	72	63.315	ENSAMXG00000041486	nom1	81	55.618	Astyanax_mexicanus
ENSUMAG00000014275	NOM1	99	75.176	ENSBTAG00000016435	NOM1	85	73.813	Bos_taurus
ENSUMAG00000014275	NOM1	99	75.139	ENSCJAG00000004336	NOM1	85	75.337	Callithrix_jacchus
ENSUMAG00000014275	NOM1	51	76.486	ENSCAFG00000029845	-	75	75.628	Canis_familiaris
ENSUMAG00000014275	NOM1	100	82.476	ENSCAFG00020005121	NOM1	85	82.819	Canis_lupus_dingo
ENSUMAG00000014275	NOM1	95	74.599	ENSCHIG00000020102	NOM1	84	73.859	Capra_hircus
ENSUMAG00000014275	NOM1	99	77.606	ENSTSYG00000000227	NOM1	83	78.592	Carlito_syrichta
ENSUMAG00000014275	NOM1	76	79.732	ENSCAPG00000016273	NOM1	100	79.732	Cavia_aperea
ENSUMAG00000014275	NOM1	99	69.871	ENSCPOG00000025538	NOM1	85	66.577	Cavia_porcellus
ENSUMAG00000014275	NOM1	90	86.321	ENSCCAG00000014944	NOM1	100	87.640	Cebus_capucinus
ENSUMAG00000014275	NOM1	100	68.961	ENSCLAG00000000267	NOM1	83	69.437	Chinchilla_lanigera
ENSUMAG00000014275	NOM1	54	85.650	ENSCHOG00000011481	-	57	85.650	Choloepus_hoffmanni
ENSUMAG00000014275	NOM1	99	65.789	ENSCPBG00000018215	NOM1	76	71.698	Chrysemys_picta_bellii
ENSUMAG00000014275	NOM1	75	41.635	ENSCING00000005248	-	97	36.327	Ciona_intestinalis
ENSUMAG00000014275	NOM1	77	83.051	ENSCANG00000041984	NOM1	91	83.051	Colobus_angolensis_palliatus
ENSUMAG00000014275	NOM1	95	73.139	ENSCGRG00001020293	Nom1	84	72.879	Cricetulus_griseus_chok1gshd
ENSUMAG00000014275	NOM1	77	78.987	ENSCGRG00000005405	Nom1	100	78.987	Cricetulus_griseus_crigri
ENSUMAG00000014275	NOM1	89	58.254	ENSCSEG00000000932	nom1	77	59.062	Cynoglossus_semilaevis
ENSUMAG00000014275	NOM1	96	58.561	ENSCVAG00000007562	nom1	82	58.143	Cyprinodon_variegatus
ENSUMAG00000014275	NOM1	96	58.636	ENSDARG00000060027	nom1	99	66.944	Danio_rerio
ENSUMAG00000014275	NOM1	97	62.920	ENSDORG00000015682	Nom1	98	62.482	Dipodomys_ordii
ENSUMAG00000014275	NOM1	75	39.623	FBgn0035336	CG9004	80	36.430	Drosophila_melanogaster
ENSUMAG00000014275	NOM1	85	66.509	ENSETEG00000003104	NOM1	85	57.944	Echinops_telfairi
ENSUMAG00000014275	NOM1	62	48.611	ENSEBUG00000010077	nom1	95	48.611	Eptatretus_burgeri
ENSUMAG00000014275	NOM1	98	81.674	ENSEASG00005001489	NOM1	85	79.333	Equus_asinus_asinus
ENSUMAG00000014275	NOM1	98	78.631	ENSECAG00000007596	NOM1	80	79.067	Equus_caballus
ENSUMAG00000014275	NOM1	76	66.539	ENSELUG00000006266	nom1	85	56.216	Esox_lucius
ENSUMAG00000014275	NOM1	99	82.345	ENSFCAG00000006467	NOM1	89	81.929	Felis_catus
ENSUMAG00000014275	NOM1	96	60.429	ENSFALG00000006904	NOM1	97	61.504	Ficedula_albicollis
ENSUMAG00000014275	NOM1	100	70.922	ENSFDAG00000016241	NOM1	88	68.491	Fukomys_damarensis
ENSUMAG00000014275	NOM1	96	57.163	ENSFHEG00000015974	nom1	81	59.352	Fundulus_heteroclitus
ENSUMAG00000014275	NOM1	95	55.222	ENSGMOG00000005129	nom1	89	55.347	Gadus_morhua
ENSUMAG00000014275	NOM1	98	62.154	ENSGALG00000006437	NOM1	79	61.773	Gallus_gallus
ENSUMAG00000014275	NOM1	78	63.419	ENSGAFG00000003211	nom1	81	58.580	Gambusia_affinis
ENSUMAG00000014275	NOM1	99	64.306	ENSGAGG00000014347	NOM1	85	64.306	Gopherus_agassizii
ENSUMAG00000014275	NOM1	95	78.216	ENSGGOG00000010920	NOM1	79	75.741	Gorilla_gorilla
ENSUMAG00000014275	NOM1	96	55.342	ENSHBUG00000014616	nom1	81	58.721	Haplochromis_burtoni
ENSUMAG00000014275	NOM1	100	71.271	ENSHGLG00000007392	NOM1	83	71.784	Heterocephalus_glaber_female
ENSUMAG00000014275	NOM1	100	71.271	ENSHGLG00100014407	NOM1	83	83.861	Heterocephalus_glaber_male
ENSUMAG00000014275	NOM1	72	61.738	ENSIPUG00000013980	nom1	82	57.431	Ictalurus_punctatus
ENSUMAG00000014275	NOM1	82	76.923	ENSSTOG00000031736	NOM1	100	76.923	Ictidomys_tridecemlineatus
ENSUMAG00000014275	NOM1	71	81.186	ENSJJAG00000011716	Nom1	99	81.186	Jaculus_jaculus
ENSUMAG00000014275	NOM1	98	54.484	ENSLBEG00000009252	nom1	83	55.433	Labrus_bergylta
ENSUMAG00000014275	NOM1	96	59.885	ENSLACG00000011777	NOM1	85	58.136	Latimeria_chalumnae
ENSUMAG00000014275	NOM1	96	59.736	ENSLOCG00000012452	nom1	83	59.675	Lepisosteus_oculatus
ENSUMAG00000014275	NOM1	100	69.671	ENSLAFG00000007119	NOM1	85	69.701	Loxodonta_africana
ENSUMAG00000014275	NOM1	100	71.823	ENSMMUG00000039033	NOM1	85	72.959	Macaca_mulatta
ENSUMAG00000014275	NOM1	77	83.239	ENSMLEG00000037062	NOM1	100	83.239	Mandrillus_leucophaeus
ENSUMAG00000014275	NOM1	98	54.926	ENSMAMG00000004118	nom1	83	56.676	Mastacembelus_armatus
ENSUMAG00000014275	NOM1	97	55.556	ENSMZEG00005000384	nom1	86	55.020	Maylandia_zebra
ENSUMAG00000014275	NOM1	97	62.554	ENSMGAG00000005051	NOM1	97	63.063	Meleagris_gallopavo
ENSUMAG00000014275	NOM1	95	73.568	ENSMAUG00000017988	Nom1	85	73.558	Mesocricetus_auratus
ENSUMAG00000014275	NOM1	100	76.955	ENSMICG00000017531	NOM1	86	76.630	Microcebus_murinus
ENSUMAG00000014275	NOM1	100	74.610	ENSMOCG00000015962	Nom1	83	73.901	Microtus_ochrogaster
ENSUMAG00000014275	NOM1	99	53.635	ENSMMOG00000004419	nom1	80	55.895	Mola_mola
ENSUMAG00000014275	NOM1	95	70.102	ENSMODG00000005177	NOM1	87	66.623	Monodelphis_domestica
ENSUMAG00000014275	NOM1	90	58.462	ENSMALG00000008800	nom1	80	58.787	Monopterus_albus
ENSUMAG00000014275	NOM1	100	70.168	MGP_CAROLIEiJ_G0027043	Nom1	85	69.344	Mus_caroli
ENSUMAG00000014275	NOM1	100	71.509	ENSMUSG00000001569	Nom1	83	71.509	Mus_musculus
ENSUMAG00000014275	NOM1	100	71.650	MGP_SPRETEiJ_G0028039	Nom1	83	71.650	Mus_spretus
ENSUMAG00000014275	NOM1	95	79.185	ENSMPUG00000009745	NOM1	99	81.831	Mustela_putorius_furo
ENSUMAG00000014275	NOM1	86	76.174	ENSMLUG00000009129	NOM1	91	80.510	Myotis_lucifugus
ENSUMAG00000014275	NOM1	99	55.679	ENSNBRG00000016429	nom1	94	65.392	Neolamprologus_brichardi
ENSUMAG00000014275	NOM1	99	74.373	ENSNLEG00000000238	NOM1	85	74.024	Nomascus_leucogenys
ENSUMAG00000014275	NOM1	81	65.385	ENSMEUG00000001108	NOM1	77	65.385	Notamacropus_eugenii
ENSUMAG00000014275	NOM1	82	64.493	ENSOPRG00000014676	NOM1	72	64.742	Ochotona_princeps
ENSUMAG00000014275	NOM1	98	71.408	ENSODEG00000009399	NOM1	100	71.550	Octodon_degus
ENSUMAG00000014275	NOM1	77	64.607	ENSONIG00000005958	nom1	91	55.020	Oreochromis_niloticus
ENSUMAG00000014275	NOM1	66	76.253	ENSOANG00000006139	-	97	76.253	Ornithorhynchus_anatinus
ENSUMAG00000014275	NOM1	99	77.075	ENSOCUG00000004071	-	84	77.215	Oryctolagus_cuniculus
ENSUMAG00000014275	NOM1	98	64.680	ENSOCUG00000021448	-	92	66.843	Oryctolagus_cuniculus
ENSUMAG00000014275	NOM1	94	56.999	ENSORLG00000010541	nom1	83	57.576	Oryzias_latipes
ENSUMAG00000014275	NOM1	94	56.421	ENSORLG00020010789	nom1	90	56.772	Oryzias_latipes_hni
ENSUMAG00000014275	NOM1	94	57.019	ENSORLG00015010475	nom1	90	56.590	Oryzias_latipes_hsok
ENSUMAG00000014275	NOM1	84	64.062	ENSOMEG00000004219	nom1	83	57.752	Oryzias_melastigma
ENSUMAG00000014275	NOM1	85	77.080	ENSOGAG00000001124	NOM1	96	78.498	Otolemur_garnettii
ENSUMAG00000014275	NOM1	95	73.723	ENSOARG00000007261	NOM1	99	71.791	Ovis_aries
ENSUMAG00000014275	NOM1	95	78.070	ENSPPAG00000041374	NOM1	85	76.280	Pan_paniscus
ENSUMAG00000014275	NOM1	99	80.111	ENSPTIG00000013532	NOM1	98	82.158	Panthera_tigris_altaica
ENSUMAG00000014275	NOM1	95	77.924	ENSPTRG00000019917	NOM1	85	75.941	Pan_troglodytes
ENSUMAG00000014275	NOM1	99	74.864	ENSPANG00000007605	NOM1	85	76.779	Papio_anubis
ENSUMAG00000014275	NOM1	96	57.081	ENSPKIG00000005825	nom1	82	57.038	Paramormyrops_kingsleyae
ENSUMAG00000014275	NOM1	85	66.893	ENSPSIG00000017848	NOM1	97	67.572	Pelodiscus_sinensis
ENSUMAG00000014275	NOM1	96	59.584	ENSPMGG00000002577	nom1	81	59.187	Periophthalmus_magnuspinnatus
ENSUMAG00000014275	NOM1	100	71.731	ENSPEMG00000024180	Nom1	86	70.542	Peromyscus_maniculatus_bairdii
ENSUMAG00000014275	NOM1	99	65.775	ENSPCIG00000027941	NOM1	84	66.667	Phascolarctos_cinereus
ENSUMAG00000014275	NOM1	75	66.157	ENSPFOG00000015771	nom1	85	56.432	Poecilia_formosa
ENSUMAG00000014275	NOM1	75	66.157	ENSPLAG00000007856	nom1	85	57.507	Poecilia_latipinna
ENSUMAG00000014275	NOM1	96	58.150	ENSPMEG00000014155	nom1	81	60.030	Poecilia_mexicana
ENSUMAG00000014275	NOM1	96	58.866	ENSPREG00000008850	nom1	81	59.012	Poecilia_reticulata
ENSUMAG00000014275	NOM1	95	72.368	ENSPPYG00000018222	NOM1	84	71.602	Pongo_abelii
ENSUMAG00000014275	NOM1	78	72.261	ENSPCAG00000000440	NOM1	86	60.832	Procavia_capensis
ENSUMAG00000014275	NOM1	77	82.486	ENSPCOG00000015222	NOM1	100	82.486	Propithecus_coquereli
ENSUMAG00000014275	NOM1	99	76.858	ENSPVAG00000014760	NOM1	83	76.297	Pteropus_vampyrus
ENSUMAG00000014275	NOM1	97	55.616	ENSPNYG00000006975	nom1	97	64.088	Pundamilia_nyererei
ENSUMAG00000014275	NOM1	78	63.838	ENSPNAG00000011085	nom1	78	56.671	Pygocentrus_nattereri
ENSUMAG00000014275	NOM1	100	66.620	ENSRNOG00000048969	AABR07059041.1	91	64.947	Rattus_norvegicus
ENSUMAG00000014275	NOM1	99	75.627	ENSRBIG00000037042	NOM1	86	75.632	Rhinopithecus_bieti
ENSUMAG00000014275	NOM1	99	75.348	ENSRROG00000037293	NOM1	86	75.366	Rhinopithecus_roxellana
ENSUMAG00000014275	NOM1	95	70.641	ENSSHAG00000017998	-	98	71.174	Sarcophilus_harrisii
ENSUMAG00000014275	NOM1	64	65.455	ENSSHAG00000002835	-	99	69.903	Sarcophilus_harrisii
ENSUMAG00000014275	NOM1	70	65.145	ENSSFOG00015003196	nom1	99	65.145	Scleropages_formosus
ENSUMAG00000014275	NOM1	96	57.725	ENSSMAG00000011047	nom1	81	58.501	Scophthalmus_maximus
ENSUMAG00000014275	NOM1	96	57.368	ENSSDUG00000006834	nom1	82	58.129	Seriola_dumerili
ENSUMAG00000014275	NOM1	96	57.554	ENSSLDG00000021812	nom1	81	58.686	Seriola_lalandi_dorsalis
ENSUMAG00000014275	NOM1	98	54.583	ENSSPUG00000002556	NOM1	88	72.611	Sphenodon_punctatus
ENSUMAG00000014275	NOM1	96	65.863	ENSSPAG00000000953	nom1	91	54.304	Stegastes_partitus
ENSUMAG00000014275	NOM1	96	61.095	ENSTGUG00000000702	-	97	60.206	Taeniopygia_guttata
ENSUMAG00000014275	NOM1	93	57.917	ENSTRUG00000010239	nom1	81	58.285	Takifugu_rubripes
ENSUMAG00000014275	NOM1	99	56.241	ENSTNIG00000012783	nom1	86	57.918	Tetraodon_nigroviridis
ENSUMAG00000014275	NOM1	95	77.239	ENSTTRG00000009691	NOM1	85	74.932	Tursiops_truncatus
ENSUMAG00000014275	NOM1	99	98.248	ENSUAMG00000025450	NOM1	85	98.248	Ursus_americanus
ENSUMAG00000014275	NOM1	100	82.197	ENSVVUG00000002608	NOM1	87	80.552	Vulpes_vulpes
ENSUMAG00000014275	NOM1	99	56.768	ENSXETG00000021611	nom1	92	69.397	Xenopus_tropicalis
ENSUMAG00000014275	NOM1	96	57.615	ENSXMAG00000002451	nom1	85	56.802	Xiphophorus_maculatus