EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000014336 (Gene tree)
Gene ID: 103676367
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 62544 bases
Position: chrKK498717.1:180577-243120
Accession: 103676367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000019581	Ago_hook	PF10427.9	1.5e-19	1	1
ENSUMAP00000019573	Ago_hook	PF10427.9	1.6e-19	1	1
ENSUMAP00000019576	Ago_hook	PF10427.9	8.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000023150	TNRC6B-203	6117	-	ENSUMAP00000019581	1691 (aa)	-	-
ENSUMAT00000023145	TNRC6B-202	5670	-	ENSUMAP00000019576	1740 (aa)	-	-
ENSUMAT00000023142	TNRC6B-201	5745	XM_008705535	ENSUMAP00000019573	1765 (aa)	XP_008703757	-

Gene Model

Click here to download ENSUMAG00000014336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000014336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000014336	TNRC6B	100	36.806	ENSUMAG00000008274	TNRC6A	97	37.375
ENSUMAG00000014336	TNRC6B	99	36.093	ENSUMAG00000013614	TNRC6C	99	35.772

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000014336	TNRC6B	100	93.791	ENSG00000100354	TNRC6B	99	97.412	Homo_sapiens
ENSUMAG00000014336	TNRC6B	100	94.786	ENSAMEG00000011025	TNRC6B	99	93.607	Ailuropoda_melanoleuca
ENSUMAG00000014336	TNRC6B	99	85.682	ENSAPLG00000009347	TNRC6B	100	85.511	Anas_platyrhynchos
ENSUMAG00000014336	TNRC6B	100	73.224	ENSACAG00000007281	TNRC6B	99	73.625	Anolis_carolinensis
ENSUMAG00000014336	TNRC6B	100	97.221	ENSANAG00000035042	TNRC6B	99	96.038	Aotus_nancymaae
ENSUMAG00000014336	TNRC6B	54	48.141	ENSAMXG00000008707	tnrc6b	82	47.240	Astyanax_mexicanus
ENSUMAG00000014336	TNRC6B	100	96.787	ENSBTAG00000021076	TNRC6B	99	96.787	Bos_taurus
ENSUMAG00000014336	TNRC6B	100	96.925	ENSCJAG00000002732	TNRC6B	99	99.155	Callithrix_jacchus
ENSUMAG00000014336	TNRC6B	100	95.927	ENSCAFG00000001255	TNRC6B	99	95.826	Canis_familiaris
ENSUMAG00000014336	TNRC6B	100	99.174	ENSCAFG00020002189	TNRC6B	98	98.812	Canis_lupus_dingo
ENSUMAG00000014336	TNRC6B	100	96.946	ENSCHIG00000003491	TNRC6B	99	96.946	Capra_hircus
ENSUMAG00000014336	TNRC6B	100	96.925	ENSTSYG00000011836	TNRC6B	99	96.459	Carlito_syrichta
ENSUMAG00000014336	TNRC6B	100	96.104	ENSCPOG00000005705	TNRC6B	99	96.104	Cavia_porcellus
ENSUMAG00000014336	TNRC6B	100	95.986	ENSCCAG00000019912	TNRC6B	99	94.969	Cebus_capucinus
ENSUMAG00000014336	TNRC6B	100	96.927	ENSCATG00000029291	TNRC6B	99	97.011	Cercocebus_atys
ENSUMAG00000014336	TNRC6B	100	96.460	ENSCLAG00000016942	TNRC6B	97	96.213	Chinchilla_lanigera
ENSUMAG00000014336	TNRC6B	100	92.790	ENSCSAG00000006021	TNRC6B	98	93.090	Chlorocebus_sabaeus
ENSUMAG00000014336	TNRC6B	92	86.643	ENSCPBG00000022932	TNRC6B	99	86.345	Chrysemys_picta_bellii
ENSUMAG00000014336	TNRC6B	100	96.631	ENSCANG00000030776	TNRC6B	99	96.071	Colobus_angolensis_palliatus
ENSUMAG00000014336	TNRC6B	96	94.717	ENSCGRG00001020166	Tnrc6b	96	94.843	Cricetulus_griseus_chok1gshd
ENSUMAG00000014336	TNRC6B	100	94.749	ENSCGRG00000016696	Tnrc6b	98	94.869	Cricetulus_griseus_crigri
ENSUMAG00000014336	TNRC6B	100	96.604	ENSDNOG00000012744	TNRC6B	99	96.604	Dasypus_novemcinctus
ENSUMAG00000014336	TNRC6B	100	96.544	ENSDORG00000003386	Tnrc6b	97	96.544	Dipodomys_ordii
ENSUMAG00000014336	TNRC6B	100	84.938	ENSETEG00000006570	TNRC6B	98	85.559	Echinops_telfairi
ENSUMAG00000014336	TNRC6B	100	98.701	ENSEASG00005005306	TNRC6B	99	97.510	Equus_asinus_asinus
ENSUMAG00000014336	TNRC6B	100	98.812	ENSECAG00000009759	TNRC6B	100	99.000	Equus_caballus
ENSUMAG00000014336	TNRC6B	58	97.070	ENSEEUG00000008690	-	62	97.070	Erinaceus_europaeus
ENSUMAG00000014336	TNRC6B	100	98.814	ENSFCAG00000004791	TNRC6B	97	98.814	Felis_catus
ENSUMAG00000014336	TNRC6B	100	89.098	ENSFALG00000012195	TNRC6B	100	88.863	Ficedula_albicollis
ENSUMAG00000014336	TNRC6B	100	96.550	ENSFDAG00000021368	TNRC6B	97	96.550	Fukomys_damarensis
ENSUMAG00000014336	TNRC6B	100	89.505	ENSGALG00000012050	TNRC6B	96	89.345	Gallus_gallus
ENSUMAG00000014336	TNRC6B	100	88.654	ENSGAGG00000025188	TNRC6B	97	88.409	Gopherus_agassizii
ENSUMAG00000014336	TNRC6B	100	97.161	ENSGGOG00000008444	TNRC6B	99	96.522	Gorilla_gorilla
ENSUMAG00000014336	TNRC6B	100	96.106	ENSHGLG00000009306	TNRC6B	97	96.106	Heterocephalus_glaber_female
ENSUMAG00000014336	TNRC6B	100	96.374	ENSHGLG00100018108	TNRC6B	98	95.977	Heterocephalus_glaber_male
ENSUMAG00000014336	TNRC6B	82	45.604	ENSIPUG00000001515	tnrc6b	93	44.809	Ictalurus_punctatus
ENSUMAG00000014336	TNRC6B	100	96.884	ENSSTOG00000008927	TNRC6B	97	96.884	Ictidomys_tridecemlineatus
ENSUMAG00000014336	TNRC6B	100	94.979	ENSJJAG00000015779	Tnrc6b	97	95.263	Jaculus_jaculus
ENSUMAG00000014336	TNRC6B	100	60.917	ENSLACG00000000628	-	98	62.153	Latimeria_chalumnae
ENSUMAG00000014336	TNRC6B	81	96.444	ENSLAFG00000014473	TNRC6B	100	95.449	Loxodonta_africana
ENSUMAG00000014336	TNRC6B	100	96.927	ENSMFAG00000003862	TNRC6B	99	97.011	Macaca_fascicularis
ENSUMAG00000014336	TNRC6B	100	97.055	ENSMMUG00000021345	TNRC6B	97	96.822	Macaca_mulatta
ENSUMAG00000014336	TNRC6B	100	97.112	ENSMNEG00000042745	TNRC6B	100	97.112	Macaca_nemestrina
ENSUMAG00000014336	TNRC6B	100	96.927	ENSMLEG00000041780	TNRC6B	99	97.011	Mandrillus_leucophaeus
ENSUMAG00000014336	TNRC6B	100	83.932	ENSMGAG00000012333	TNRC6B	99	83.627	Meleagris_gallopavo
ENSUMAG00000014336	TNRC6B	100	94.572	ENSMAUG00000016123	Tnrc6b	97	94.812	Mesocricetus_auratus
ENSUMAG00000014336	TNRC6B	100	97.170	ENSMICG00000014056	TNRC6B	100	97.170	Microcebus_murinus
ENSUMAG00000014336	TNRC6B	96	94.500	ENSMOCG00000020334	Tnrc6b	96	94.500	Microtus_ochrogaster
ENSUMAG00000014336	TNRC6B	100	94.277	MGP_CAROLIEiJ_G0020043	Tnrc6b	97	94.527	Mus_caroli
ENSUMAG00000014336	TNRC6B	100	94.218	ENSMUSG00000047888	Tnrc6b	97	94.470	Mus_musculus
ENSUMAG00000014336	TNRC6B	100	93.920	MGP_PahariEiJ_G0020045	Tnrc6b	97	94.238	Mus_pahari
ENSUMAG00000014336	TNRC6B	100	94.454	MGP_SPRETEiJ_G0020941	Tnrc6b	97	94.812	Mus_spretus
ENSUMAG00000014336	TNRC6B	98	98.855	ENSMPUG00000016442	TNRC6B	99	90.054	Mustela_putorius_furo
ENSUMAG00000014336	TNRC6B	100	91.648	ENSMLUG00000008765	TNRC6B	99	91.185	Myotis_lucifugus
ENSUMAG00000014336	TNRC6B	100	94.932	ENSNGAG00000021294	Tnrc6b	97	94.932	Nannospalax_galili
ENSUMAG00000014336	TNRC6B	89	95.483	ENSNLEG00000015311	TNRC6B	94	97.875	Nomascus_leucogenys
ENSUMAG00000014336	TNRC6B	90	91.558	ENSOPRG00000012054	TNRC6B	87	90.605	Ochotona_princeps
ENSUMAG00000014336	TNRC6B	100	96.610	ENSODEG00000013146	TNRC6B	97	96.610	Octodon_degus
ENSUMAG00000014336	TNRC6B	54	47.231	ENSONIG00000019679	-	96	41.566	Oreochromis_niloticus
ENSUMAG00000014336	TNRC6B	100	96.034	ENSOCUG00000016128	TNRC6B	97	96.034	Oryctolagus_cuniculus
ENSUMAG00000014336	TNRC6B	100	92.005	ENSOGAG00000011096	TNRC6B	99	90.726	Otolemur_garnettii
ENSUMAG00000014336	TNRC6B	100	96.527	ENSOARG00000017238	TNRC6B	97	96.509	Ovis_aries
ENSUMAG00000014336	TNRC6B	100	97.043	ENSPPAG00000028514	TNRC6B	99	96.029	Pan_paniscus
ENSUMAG00000014336	TNRC6B	100	95.506	ENSPPRG00000017741	TNRC6B	99	96.034	Panthera_pardus
ENSUMAG00000014336	TNRC6B	100	91.839	ENSPTIG00000022064	TNRC6B	98	92.582	Panthera_tigris_altaica
ENSUMAG00000014336	TNRC6B	100	97.280	ENSPTRG00000047826	TNRC6B	99	96.913	Pan_troglodytes
ENSUMAG00000014336	TNRC6B	100	88.232	ENSPANG00000009271	TNRC6B	99	88.634	Papio_anubis
ENSUMAG00000014336	TNRC6B	100	88.706	ENSPSIG00000005318	TNRC6B	98	88.459	Pelodiscus_sinensis
ENSUMAG00000014336	TNRC6B	100	94.052	ENSPEMG00000011403	Tnrc6b	97	94.195	Peromyscus_maniculatus_bairdii
ENSUMAG00000014336	TNRC6B	100	86.985	ENSPCIG00000020347	TNRC6B	99	87.422	Phascolarctos_cinereus
ENSUMAG00000014336	TNRC6B	91	41.564	ENSPFOG00000006033	-	95	42.486	Poecilia_formosa
ENSUMAG00000014336	TNRC6B	100	94.027	ENSPPYG00000011849	TNRC6B	99	94.051	Pongo_abelii
ENSUMAG00000014336	TNRC6B	73	92.694	ENSPCAG00000008739	TNRC6B	74	91.515	Procavia_capensis
ENSUMAG00000014336	TNRC6B	100	97.104	ENSPCOG00000020790	TNRC6B	99	96.634	Propithecus_coquereli
ENSUMAG00000014336	TNRC6B	93	96.632	ENSPVAG00000004975	TNRC6B	91	96.632	Pteropus_vampyrus
ENSUMAG00000014336	TNRC6B	74	44.168	ENSPNAG00000011713	tnrc6b	76	45.189	Pygocentrus_nattereri
ENSUMAG00000014336	TNRC6B	100	93.834	ENSRNOG00000024907	Tnrc6b	97	94.098	Rattus_norvegicus
ENSUMAG00000014336	TNRC6B	100	96.690	ENSRBIG00000035576	TNRC6B	99	95.945	Rhinopithecus_bieti
ENSUMAG00000014336	TNRC6B	100	96.772	ENSRROG00000031135	TNRC6B	100	96.772	Rhinopithecus_roxellana
ENSUMAG00000014336	TNRC6B	100	93.794	ENSSBOG00000029743	TNRC6B	100	94.394	Saimiri_boliviensis_boliviensis
ENSUMAG00000014336	TNRC6B	100	81.777	ENSSHAG00000009692	TNRC6B	99	81.733	Sarcophilus_harrisii
ENSUMAG00000014336	TNRC6B	67	85.789	ENSSARG00000007971	-	70	85.789	Sorex_araneus
ENSUMAG00000014336	TNRC6B	92	82.374	ENSSPUG00000010801	TNRC6B	100	81.721	Sphenodon_punctatus
ENSUMAG00000014336	TNRC6B	100	97.734	ENSSSCG00000000078	TNRC6B	99	97.734	Sus_scrofa
ENSUMAG00000014336	TNRC6B	93	85.262	ENSTGUG00000010138	-	99	84.475	Taeniopygia_guttata
ENSUMAG00000014336	TNRC6B	100	91.839	ENSTTRG00000011465	TNRC6B	97	91.898	Tursiops_truncatus
ENSUMAG00000014336	TNRC6B	100	100.000	ENSUAMG00000007174	TNRC6B	99	99.148	Ursus_americanus
ENSUMAG00000014336	TNRC6B	67	91.957	ENSVPAG00000001467	TNRC6B	71	89.352	Vicugna_pacos
ENSUMAG00000014336	TNRC6B	100	99.378	ENSVVUG00000007064	TNRC6B	99	99.378	Vulpes_vulpes