EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000014435 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 4435 bases
Position: chrKK498718.1:401958-406392
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000019736	APOBEC_N	PF08210.11	9.4e-43	1	1
ENSUMAP00000019740	APOBEC_N	PF08210.11	1.2e-42	1	1
ENSUMAP00000019736	APOBEC_C	PF05240.14	3.3e-31	1	1
ENSUMAP00000019740	APOBEC_C	PF05240.14	4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000023336	-	931	-	ENSUMAP00000019740	211 (aa)	-	-
ENSUMAT00000023332	-	889	-	ENSUMAP00000019736	194 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000014435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000014435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000014435	-	89	34.426	ENSUMAG00000014441	-	85	34.426
ENSUMAG00000014435	-	78	35.882	ENSUMAG00000014447	-	84	35.882
ENSUMAG00000014435	-	78	33.333	ENSUMAG00000016552	APOBEC1	64	33.333
ENSUMAG00000014435	-	97	36.082	ENSUMAG00000016540	AICDA	97	36.082
ENSUMAG00000014435	-	89	34.500	ENSUMAG00000002249	-	93	34.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000014435	-	91	50.829	ENSG00000100298	APOBEC3H	99	50.829	Homo_sapiens
ENSUMAG00000014435	-	100	85.930	ENSAMEG00000010818	-	87	86.070	Ailuropoda_melanoleuca
ENSUMAG00000014435	-	99	49.751	ENSANAG00000025410	APOBEC3H	90	49.751	Aotus_nancymaae
ENSUMAG00000014435	-	96	57.222	ENSBTAG00000007755	APOBEC3H	96	57.143	Bos_taurus
ENSUMAG00000014435	-	91	50.556	ENSCJAG00000012524	APOBEC3H	91	52.143	Callithrix_jacchus
ENSUMAG00000014435	-	99	66.321	ENSCAFG00000001361	APOBEC3Z3	100	66.321	Canis_familiaris
ENSUMAG00000014435	-	92	63.483	ENSCAFG00020002584	-	92	63.483	Canis_lupus_dingo
ENSUMAG00000014435	-	95	57.627	ENSCHIG00000026580	-	96	57.865	Capra_hircus
ENSUMAG00000014435	-	89	53.757	ENSTSYG00000032894	-	99	53.757	Carlito_syrichta
ENSUMAG00000014435	-	99	52.356	ENSCPOG00000009257	-	90	52.356	Cavia_porcellus
ENSUMAG00000014435	-	99	50.500	ENSCCAG00000008525	APOBEC3H	94	50.500	Cebus_capucinus
ENSUMAG00000014435	-	91	52.778	ENSCATG00000030302	APOBEC3H	99	52.778	Cercocebus_atys
ENSUMAG00000014435	-	98	52.850	ENSCLAG00000016615	-	96	52.850	Chinchilla_lanigera
ENSUMAG00000014435	-	99	54.040	ENSCSAG00000006371	APOBEC3H	94	54.040	Chlorocebus_sabaeus
ENSUMAG00000014435	-	98	53.846	ENSCGRG00001022976	Apobec3	91	53.846	Cricetulus_griseus_chok1gshd
ENSUMAG00000014435	-	98	53.846	ENSCGRG00000005621	Apobec3	91	53.846	Cricetulus_griseus_crigri
ENSUMAG00000014435	-	91	53.591	ENSDORG00000027271	-	97	53.846	Dipodomys_ordii
ENSUMAG00000014435	-	98	58.854	ENSECAG00000007726	APOBEC3H	97	54.222	Equus_caballus
ENSUMAG00000014435	-	99	64.767	ENSFCAG00000005251	APOBEC3Z3	99	64.767	Felis_catus
ENSUMAG00000014435	-	91	56.983	ENSSTOG00000007125	-	86	56.983	Ictidomys_tridecemlineatus
ENSUMAG00000014435	-	90	55.556	ENSJJAG00000016840	-	88	55.556	Jaculus_jaculus
ENSUMAG00000014435	-	95	48.000	ENSLAFG00000027404	-	96	48.000	Loxodonta_africana
ENSUMAG00000014435	-	99	53.535	ENSMFAG00000031827	APOBEC3H	95	54.422	Macaca_fascicularis
ENSUMAG00000014435	-	99	53.299	ENSMMUG00000001016	APOBEC3H	95	55.102	Macaca_mulatta
ENSUMAG00000014435	-	99	53.535	ENSMNEG00000039259	APOBEC3H	95	54.422	Macaca_nemestrina
ENSUMAG00000014435	-	99	52.525	ENSMLEG00000033417	APOBEC3H	95	53.061	Mandrillus_leucophaeus
ENSUMAG00000014435	-	98	55.307	ENSMAUG00000011683	Apobec3	91	54.359	Mesocricetus_auratus
ENSUMAG00000014435	-	99	50.711	ENSMOCG00000021576	Apobec3	82	54.802	Microtus_ochrogaster
ENSUMAG00000014435	-	99	50.867	MGP_CAROLIEiJ_G0020029	Apobec3	100	42.353	Mus_caroli
ENSUMAG00000014435	-	99	50.761	ENSMUSG00000009585	Apobec3	100	51.485	Mus_musculus
ENSUMAG00000014435	-	99	48.744	MGP_PahariEiJ_G0020031	-	87	48.744	Mus_pahari
ENSUMAG00000014435	-	99	51.031	MGP_SPRETEiJ_G0020927	Apobec3	92	51.031	Mus_spretus
ENSUMAG00000014435	-	99	68.912	ENSMPUG00000013239	-	92	68.912	Mustela_putorius_furo
ENSUMAG00000014435	-	99	52.332	ENSNGAG00000018998	Apobec3	98	52.880	Nannospalax_galili
ENSUMAG00000014435	-	99	51.515	ENSNLEG00000015218	-	94	51.515	Nomascus_leucogenys
ENSUMAG00000014435	-	95	44.000	ENSOCUG00000023913	-	89	44.000	Oryctolagus_cuniculus
ENSUMAG00000014435	-	95	57.778	ENSOARG00000016290	APOBEC3F	97	58.011	Ovis_aries
ENSUMAG00000014435	-	91	51.934	ENSPPAG00000036522	APOBEC3H	98	51.934	Pan_paniscus
ENSUMAG00000014435	-	91	35.676	ENSPPRG00000003675	-	95	35.676	Panthera_pardus
ENSUMAG00000014435	-	99	66.495	ENSPPRG00000003941	-	99	66.495	Panthera_pardus
ENSUMAG00000014435	-	99	66.495	ENSPTIG00000010283	-	99	66.495	Panthera_tigris_altaica
ENSUMAG00000014435	-	91	51.934	ENSPTRG00000014390	APOBEC3H	98	51.934	Pan_troglodytes
ENSUMAG00000014435	-	99	52.792	ENSPANG00000010774	APOBEC3H	94	52.792	Papio_anubis
ENSUMAG00000014435	-	99	52.792	ENSPEMG00000000456	Apobec3	86	52.792	Peromyscus_maniculatus_bairdii
ENSUMAG00000014435	-	99	51.515	ENSPPYG00000011834	-	94	51.515	Pongo_abelii
ENSUMAG00000014435	-	90	45.143	ENSPCAG00000015655	-	98	45.143	Procavia_capensis
ENSUMAG00000014435	-	64	34.677	ENSPVAG00000024267	-	94	34.677	Pteropus_vampyrus
ENSUMAG00000014435	-	64	36.290	ENSPVAG00000024161	-	94	36.290	Pteropus_vampyrus
ENSUMAG00000014435	-	91	54.802	ENSPVAG00000009462	-	99	54.802	Pteropus_vampyrus
ENSUMAG00000014435	-	99	49.457	ENSRNOG00000016852	Apobec3	92	49.457	Rattus_norvegicus
ENSUMAG00000014435	-	99	52.020	ENSRBIG00000029088	APOBEC3H	94	52.020	Rhinopithecus_bieti
ENSUMAG00000014435	-	99	52.525	ENSRROG00000024699	APOBEC3H	94	52.525	Rhinopithecus_roxellana
ENSUMAG00000014435	-	91	50.000	ENSSBOG00000030005	APOBEC3H	100	51.064	Saimiri_boliviensis_boliviensis
ENSUMAG00000014435	-	99	57.216	ENSSSCG00000000091	APOBEC3B	84	57.216	Sus_scrofa
ENSUMAG00000014435	-	87	57.396	ENSTBEG00000001532	-	99	57.396	Tupaia_belangeri
ENSUMAG00000014435	-	92	57.865	ENSTTRG00000001266	-	100	57.865	Tursiops_truncatus
ENSUMAG00000014435	-	92	94.086	ENSUAMG00000004427	-	85	94.149	Ursus_americanus
ENSUMAG00000014435	-	65	58.268	ENSVPAG00000011108	-	99	58.268	Vicugna_pacos
ENSUMAG00000014435	-	92	64.964	ENSVVUG00000014624	-	60	64.964	Vulpes_vulpes