EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000015124 (Gene tree)
Gene ID: -
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 10111 bases
Position: chrKK499555.1:1177075-1187185
Accession: 13917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000020781	ResIII	PF04851.15	7.5e-08	1	1
ENSUMAP00000020768	ResIII	PF04851.15	1.2e-07	1	1
ENSUMAP00000020791	ResIII	PF04851.15	5.2e-06	1	1
ENSUMAP00000020781	DEAD	PF00270.29	3.3e-39	1	1
ENSUMAP00000020768	DEAD	PF00270.29	5.3e-39	1	1
ENSUMAP00000020791	DEAD	PF00270.29	3.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000024634	DDX39B-203	603	-	ENSUMAP00000020791	200 (aa)	-	-
ENSUMAT00000024608	DDX39B-201	1218	-	ENSUMAP00000020768	405 (aa)	-	-
ENSUMAT00000024622	DDX39B-202	921	-	ENSUMAP00000020781	306 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000015124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000015124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000015124	DDX39B	100	82.944	ENSUMAG00000004317	DDX39A	99	82.944
ENSUMAG00000015124	DDX39B	86	30.933	ENSUMAG00000010366	DDX3Y	53	30.933
ENSUMAG00000015124	DDX39B	87	33.060	ENSUMAG00000016980	-	68	33.060
ENSUMAG00000015124	DDX39B	87	33.243	ENSUMAG00000016558	-	88	33.243
ENSUMAG00000015124	DDX39B	87	33.803	ENSUMAG00000000993	DDX6	73	33.521
ENSUMAG00000015124	DDX39B	84	32.486	ENSUMAG00000006489	DDX49	75	32.486
ENSUMAG00000015124	DDX39B	94	34.536	ENSUMAG00000014617	EIF4A3	97	35.942
ENSUMAG00000015124	DDX39B	78	35.093	ENSUMAG00000002358	DDX47	70	35.093
ENSUMAG00000015124	DDX39B	87	36.034	ENSUMAG00000004240	EIF4A2	87	36.034
ENSUMAG00000015124	DDX39B	75	30.149	ENSUMAG00000016796	DDX3X	60	30.149
ENSUMAG00000015124	DDX39B	89	30.026	ENSUMAG00000001803	DDX25	77	30.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000015124	DDX39B	100	90.888	ENSG00000198563	DDX39B	100	90.888	Homo_sapiens
ENSUMAG00000015124	DDX39B	100	91.121	ENSAMEG00000009508	DDX39B	99	91.121	Ailuropoda_melanoleuca
ENSUMAG00000015124	DDX39B	99	84.543	ENSACIG00000004534	ddx39b	98	84.543	Amphilophus_citrinellus
ENSUMAG00000015124	DDX39B	100	84.259	ENSATEG00000012366	ddx39b	100	84.259	Anabas_testudineus
ENSUMAG00000015124	DDX39B	100	88.112	ENSACAG00000012240	DDX39B	100	88.112	Anolis_carolinensis
ENSUMAG00000015124	DDX39B	100	90.888	ENSANAG00000030372	DDX39B	100	90.888	Aotus_nancymaae
ENSUMAG00000015124	DDX39B	99	81.797	ENSACLG00000018759	ddx39b	99	81.797	Astatotilapia_calliptera
ENSUMAG00000015124	DDX39B	100	83.945	ENSAMXG00000017837	ddx39b	100	83.945	Astyanax_mexicanus
ENSUMAG00000015124	DDX39B	100	90.654	ENSBTAG00000014490	DDX39B	100	90.654	Bos_taurus
ENSUMAG00000015124	DDX39B	100	90.888	ENSCJAG00000003152	DDX39B	100	90.888	Callithrix_jacchus
ENSUMAG00000015124	DDX39B	100	90.888	ENSCAFG00000000509	DDX39B	100	94.839	Canis_familiaris
ENSUMAG00000015124	DDX39B	100	90.888	ENSCAFG00020020530	DDX39B	100	90.888	Canis_lupus_dingo
ENSUMAG00000015124	DDX39B	100	90.654	ENSCHIG00000004579	DDX39B	100	90.654	Capra_hircus
ENSUMAG00000015124	DDX39B	100	81.517	ENSTSYG00000029741	-	94	81.492	Carlito_syrichta
ENSUMAG00000015124	DDX39B	100	90.888	ENSTSYG00000010226	-	100	90.888	Carlito_syrichta
ENSUMAG00000015124	DDX39B	100	90.654	ENSCAPG00000010066	DDX39B	100	90.654	Cavia_aperea
ENSUMAG00000015124	DDX39B	100	90.654	ENSCPOG00000002335	DDX39B	100	90.654	Cavia_porcellus
ENSUMAG00000015124	DDX39B	100	90.888	ENSCCAG00000027897	DDX39B	100	90.888	Cebus_capucinus
ENSUMAG00000015124	DDX39B	99	82.588	ENSCATG00000043709	DDX39B	99	82.588	Cercocebus_atys
ENSUMAG00000015124	DDX39B	100	90.654	ENSCLAG00000014555	DDX39B	100	90.654	Chinchilla_lanigera
ENSUMAG00000015124	DDX39B	99	90.588	ENSCSAG00000008517	DDX39B	100	90.588	Chlorocebus_sabaeus
ENSUMAG00000015124	DDX39B	66	94.139	ENSCPBG00000014671	-	100	94.139	Chrysemys_picta_bellii
ENSUMAG00000015124	DDX39B	100	90.888	ENSCANG00000041217	DDX39B	100	90.888	Colobus_angolensis_palliatus
ENSUMAG00000015124	DDX39B	96	76.289	ENSCGRG00001021916	-	95	75.773	Cricetulus_griseus_chok1gshd
ENSUMAG00000015124	DDX39B	99	85.185	ENSCGRG00001017315	-	100	85.185	Cricetulus_griseus_chok1gshd
ENSUMAG00000015124	DDX39B	94	86.829	ENSCGRG00000000078	-	90	87.317	Cricetulus_griseus_crigri
ENSUMAG00000015124	DDX39B	96	85.358	ENSCGRG00000012479	-	100	85.358	Cricetulus_griseus_crigri
ENSUMAG00000015124	DDX39B	100	83.678	ENSDARG00000036069	ddx39b	100	83.908	Danio_rerio
ENSUMAG00000015124	DDX39B	100	90.888	ENSDNOG00000010215	DDX39B	100	90.888	Dasypus_novemcinctus
ENSUMAG00000015124	DDX39B	94	88.780	ENSDORG00000004985	Ddx39b	100	89.840	Dipodomys_ordii
ENSUMAG00000015124	DDX39B	94	86.829	ENSETEG00000009649	DDX39B	87	80.749	Echinops_telfairi
ENSUMAG00000015124	DDX39B	100	90.888	ENSEASG00005017156	DDX39B	100	90.888	Equus_asinus_asinus
ENSUMAG00000015124	DDX39B	100	90.888	ENSECAG00000007750	DDX39B	100	90.888	Equus_caballus
ENSUMAG00000015124	DDX39B	100	83.759	ENSELUG00000017904	ddx39b	100	83.759	Esox_lucius
ENSUMAG00000015124	DDX39B	100	91.121	ENSFCAG00000004497	DDX39B	100	91.121	Felis_catus
ENSUMAG00000015124	DDX39B	100	90.654	ENSFDAG00000011074	DDX39B	100	90.654	Fukomys_damarensis
ENSUMAG00000015124	DDX39B	77	94.620	ENSGAGG00000001300	-	80	94.620	Gopherus_agassizii
ENSUMAG00000015124	DDX39B	100	90.888	ENSGGOG00000005989	DDX39B	100	90.888	Gorilla_gorilla
ENSUMAG00000015124	DDX39B	97	75.701	ENSHBUG00000022054	-	79	75.701	Haplochromis_burtoni
ENSUMAG00000015124	DDX39B	100	90.187	ENSHGLG00000019248	DDX39B	100	90.187	Heterocephalus_glaber_female
ENSUMAG00000015124	DDX39B	100	90.187	ENSHGLG00100011850	DDX39B	100	90.187	Heterocephalus_glaber_male
ENSUMAG00000015124	DDX39B	100	82.798	ENSIPUG00000015733	DDX39B	94	83.257	Ictalurus_punctatus
ENSUMAG00000015124	DDX39B	100	90.421	ENSSTOG00000012838	DDX39B	100	90.421	Ictidomys_tridecemlineatus
ENSUMAG00000015124	DDX39B	100	90.187	ENSJJAG00000005660	-	100	90.187	Jaculus_jaculus
ENSUMAG00000015124	DDX39B	94	64.878	ENSLBEG00000017177	-	86	66.935	Labrus_bergylta
ENSUMAG00000015124	DDX39B	99	71.327	ENSLBEG00000012254	ddx39b	99	71.158	Labrus_bergylta
ENSUMAG00000015124	DDX39B	100	80.876	ENSLACG00000002110	DDX39B	100	80.876	Latimeria_chalumnae
ENSUMAG00000015124	DDX39B	100	91.101	ENSLAFG00000014202	DDX39B	100	91.101	Loxodonta_africana
ENSUMAG00000015124	DDX39B	100	90.888	ENSMFAG00000034233	DDX39B	100	90.888	Macaca_fascicularis
ENSUMAG00000015124	DDX39B	100	90.888	ENSMMUG00000008839	DDX39B	100	90.888	Macaca_mulatta
ENSUMAG00000015124	DDX39B	100	90.888	ENSMNEG00000041059	DDX39B	100	90.888	Macaca_nemestrina
ENSUMAG00000015124	DDX39B	100	90.888	ENSMLEG00000043791	DDX39B	100	90.888	Mandrillus_leucophaeus
ENSUMAG00000015124	DDX39B	99	81.797	ENSMZEG00005017654	ddx39b	99	81.797	Maylandia_zebra
ENSUMAG00000015124	DDX39B	100	90.187	ENSMAUG00000008059	Ddx39b	100	90.187	Mesocricetus_auratus
ENSUMAG00000015124	DDX39B	100	90.888	ENSMICG00000017349	DDX39B	100	90.888	Microcebus_murinus
ENSUMAG00000015124	DDX39B	100	90.421	ENSMOCG00000011169	Ddx39b	100	90.421	Microtus_ochrogaster
ENSUMAG00000015124	DDX39B	94	88.293	ENSMODG00000015791	DDX39B	88	89.362	Monodelphis_domestica
ENSUMAG00000015124	DDX39B	84	82.609	MGP_CAROLIEiJ_G0021519	-	100	82.609	Mus_caroli
ENSUMAG00000015124	DDX39B	100	90.421	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSUMAG00000015124	DDX39B	100	90.421	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSUMAG00000015124	DDX39B	100	90.421	MGP_SPRETEiJ_G0022424	Ddx39b	100	90.421	Mus_spretus
ENSUMAG00000015124	DDX39B	100	91.121	ENSMPUG00000011407	DDX39B	100	91.121	Mustela_putorius_furo
ENSUMAG00000015124	DDX39B	75	94.855	ENSMLUG00000001681	DDX39B	100	94.855	Myotis_lucifugus
ENSUMAG00000015124	DDX39B	100	90.888	ENSNGAG00000022948	Ddx39b	100	90.888	Nannospalax_galili
ENSUMAG00000015124	DDX39B	100	73.723	ENSNLEG00000006094	DDX39B	100	73.723	Nomascus_leucogenys
ENSUMAG00000015124	DDX39B	85	92.793	ENSMEUG00000008264	DDX39B	86	92.793	Notamacropus_eugenii
ENSUMAG00000015124	DDX39B	100	91.121	ENSOPRG00000011923	DDX39B	100	91.121	Ochotona_princeps
ENSUMAG00000015124	DDX39B	100	90.421	ENSODEG00000018083	DDX39B	100	90.421	Octodon_degus
ENSUMAG00000015124	DDX39B	100	83.102	ENSONIG00000004740	ddx39b	100	83.102	Oreochromis_niloticus
ENSUMAG00000015124	DDX39B	94	88.293	ENSOANG00000008361	DDX39B	95	89.451	Ornithorhynchus_anatinus
ENSUMAG00000015124	DDX39B	100	87.810	ENSOCUG00000024126	DDX39B	100	87.810	Oryctolagus_cuniculus
ENSUMAG00000015124	DDX39B	87	87.433	ENSOGAG00000009067	-	100	93.519	Otolemur_garnettii
ENSUMAG00000015124	DDX39B	100	89.977	ENSOGAG00000028850	-	100	89.977	Otolemur_garnettii
ENSUMAG00000015124	DDX39B	100	90.654	ENSOARG00000008787	DDX39B	98	90.654	Ovis_aries
ENSUMAG00000015124	DDX39B	100	90.888	ENSPPAG00000043072	DDX39B	100	90.888	Pan_paniscus
ENSUMAG00000015124	DDX39B	100	91.121	ENSPPRG00000001913	DDX39B	100	91.121	Panthera_pardus
ENSUMAG00000015124	DDX39B	100	90.421	ENSPTIG00000017669	DDX39B	100	90.421	Panthera_tigris_altaica
ENSUMAG00000015124	DDX39B	100	90.888	ENSPTRG00000032509	DDX39B	100	90.888	Pan_troglodytes
ENSUMAG00000015124	DDX39B	100	90.888	ENSPANG00000018609	DDX39B	100	90.888	Papio_anubis
ENSUMAG00000015124	DDX39B	100	82.380	ENSPKIG00000011324	ddx39b	100	83.066	Paramormyrops_kingsleyae
ENSUMAG00000015124	DDX39B	100	90.187	ENSPEMG00000016905	Ddx39b	100	90.187	Peromyscus_maniculatus_bairdii
ENSUMAG00000015124	DDX39B	100	90.888	ENSPCIG00000017572	DDX39B	100	90.888	Phascolarctos_cinereus
ENSUMAG00000015124	DDX39B	100	90.888	ENSPPYG00000016433	DDX39B	100	90.888	Pongo_abelii
ENSUMAG00000015124	DDX39B	69	94.014	ENSPCAG00000003484	DDX39B	100	94.014	Procavia_capensis
ENSUMAG00000015124	DDX39B	100	90.888	ENSPCOG00000018656	DDX39B	100	90.888	Propithecus_coquereli
ENSUMAG00000015124	DDX39B	100	90.421	ENSPVAG00000004653	DDX39B	100	90.421	Pteropus_vampyrus
ENSUMAG00000015124	DDX39B	98	73.585	ENSPNYG00000010382	ddx39b	98	73.770	Pundamilia_nyererei
ENSUMAG00000015124	DDX39B	100	83.716	ENSPNAG00000026926	ddx39b	100	83.716	Pygocentrus_nattereri
ENSUMAG00000015124	DDX39B	100	90.421	ENSRNOG00000000841	Ddx39b	100	90.421	Rattus_norvegicus
ENSUMAG00000015124	DDX39B	100	85.545	ENSRBIG00000031309	DDX39B	100	85.545	Rhinopithecus_bieti
ENSUMAG00000015124	DDX39B	100	90.888	ENSRROG00000039517	DDX39B	100	90.888	Rhinopithecus_roxellana
ENSUMAG00000015124	DDX39B	100	85.545	ENSSBOG00000035513	-	100	85.545	Saimiri_boliviensis_boliviensis
ENSUMAG00000015124	DDX39B	65	82.192	ENSSBOG00000030486	-	97	82.192	Saimiri_boliviensis_boliviensis
ENSUMAG00000015124	DDX39B	100	90.888	ENSSHAG00000003209	DDX39B	100	90.888	Sarcophilus_harrisii
ENSUMAG00000015124	DDX39B	100	82.151	ENSSFOG00015016107	ddx39b	100	82.838	Scleropages_formosus
ENSUMAG00000015124	DDX39B	100	84.722	ENSSDUG00000011557	ddx39b	100	84.954	Seriola_dumerili
ENSUMAG00000015124	DDX39B	100	84.491	ENSSLDG00000015763	ddx39b	100	84.722	Seriola_lalandi_dorsalis
ENSUMAG00000015124	DDX39B	94	88.293	ENSSARG00000005245	DDX39B	100	82.086	Sorex_araneus
ENSUMAG00000015124	DDX39B	100	88.785	ENSSPUG00000012805	DDX39B	100	88.785	Sphenodon_punctatus
ENSUMAG00000015124	DDX39B	100	90.888	ENSSSCG00000001400	DDX39B	100	95.376	Sus_scrofa
ENSUMAG00000015124	DDX39B	100	70.588	ENSTBEG00000003721	DDX39B	100	69.647	Tupaia_belangeri
ENSUMAG00000015124	DDX39B	100	82.448	ENSTTRG00000014074	DDX39B	100	82.448	Tursiops_truncatus
ENSUMAG00000015124	DDX39B	100	84.434	ENSUAMG00000027335	DDX39B	100	84.670	Ursus_americanus
ENSUMAG00000015124	DDX39B	59	79.646	ENSVPAG00000009167	-	74	79.646	Vicugna_pacos
ENSUMAG00000015124	DDX39B	100	90.888	ENSVVUG00000019518	DDX39B	99	90.888	Vulpes_vulpes
ENSUMAG00000015124	DDX39B	100	74.884	ENSXETG00000002498	ddx39b	99	74.884	Xenopus_tropicalis