EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000015351 (Gene tree)
Gene ID: 103678265
Gene Symbol: CNOT4
Alias: -
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 137601 bases
Position: chrKK498746.1:1802723-1940323
Accession: 103678265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000020989	RRM_1	PF00076.22	9.6e-06	1	1
ENSUMAP00000020978	RRM_1	PF00076.22	1.3e-05	1	1
ENSUMAP00000020975	RRM_1	PF00076.22	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000024860	CNOT4-202	3338	-	ENSUMAP00000020978	676 (aa)	-	-
ENSUMAT00000024857	CNOT4-201	3551	-	ENSUMAP00000020975	747 (aa)	-	-
ENSUMAT00000024871	CNOT4-203	2312	-	ENSUMAP00000020989	575 (aa)	XP_008705823	UPI00004BC502

Gene Model

Click here to download ENSUMAG00000015351's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000015351's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000015351	CNOT4	100	99.478	ENSG00000080802	CNOT4	100	99.478	Homo_sapiens
ENSUMAG00000015351	CNOT4	94	89.299	ENSAPOG00000016272	cnot4a	95	77.355	Acanthochromis_polyacanthus
ENSUMAG00000015351	CNOT4	94	99.815	ENSAMEG00000012081	CNOT4	91	98.636	Ailuropoda_melanoleuca
ENSUMAG00000015351	CNOT4	94	65.094	ENSACIG00000003011	cnot4a	99	60.848	Amphilophus_citrinellus
ENSUMAG00000015351	CNOT4	95	89.299	ENSAOCG00000010792	cnot4a	91	89.299	Amphiprion_ocellaris
ENSUMAG00000015351	CNOT4	95	89.299	ENSAPEG00000004680	cnot4a	91	89.299	Amphiprion_percula
ENSUMAG00000015351	CNOT4	95	88.930	ENSATEG00000017580	cnot4a	91	88.930	Anabas_testudineus
ENSUMAG00000015351	CNOT4	95	88.771	ENSAPLG00000016441	CNOT4	99	88.771	Anas_platyrhynchos
ENSUMAG00000015351	CNOT4	95	88.639	ENSACAG00000011154	CNOT4	99	88.639	Anolis_carolinensis
ENSUMAG00000015351	CNOT4	100	98.957	ENSANAG00000032156	CNOT4	100	98.957	Aotus_nancymaae
ENSUMAG00000015351	CNOT4	95	88.321	ENSACLG00000002514	cnot4a	91	88.321	Astatotilapia_calliptera
ENSUMAG00000015351	CNOT4	94	74.275	ENSAMXG00000001373	cnot4a	99	71.779	Astyanax_mexicanus
ENSUMAG00000015351	CNOT4	93	93.962	ENSAMXG00000011473	cnot4b	99	71.791	Astyanax_mexicanus
ENSUMAG00000015351	CNOT4	100	99.652	ENSBTAG00000017919	CNOT4	100	99.652	Bos_taurus
ENSUMAG00000015351	CNOT4	100	98.957	ENSCJAG00000012532	CNOT4	100	98.957	Callithrix_jacchus
ENSUMAG00000015351	CNOT4	100	99.304	ENSCAFG00000003223	CNOT4	100	99.304	Canis_familiaris
ENSUMAG00000015351	CNOT4	100	99.304	ENSCAFG00020000093	CNOT4	100	99.304	Canis_lupus_dingo
ENSUMAG00000015351	CNOT4	100	99.130	ENSCHIG00000010955	CNOT4	100	99.130	Capra_hircus
ENSUMAG00000015351	CNOT4	100	99.130	ENSTSYG00000000893	CNOT4	100	99.130	Carlito_syrichta
ENSUMAG00000015351	CNOT4	94	97.959	ENSCAPG00000006213	CNOT4	99	95.768	Cavia_aperea
ENSUMAG00000015351	CNOT4	100	97.913	ENSCPOG00000011526	CNOT4	100	97.913	Cavia_porcellus
ENSUMAG00000015351	CNOT4	100	99.652	ENSCCAG00000024414	CNOT4	100	99.652	Cebus_capucinus
ENSUMAG00000015351	CNOT4	100	99.652	ENSCATG00000022607	CNOT4	100	99.652	Cercocebus_atys
ENSUMAG00000015351	CNOT4	100	98.435	ENSCLAG00000001857	CNOT4	100	98.435	Chinchilla_lanigera
ENSUMAG00000015351	CNOT4	95	98.872	ENSCSAG00000009096	CNOT4	99	98.872	Chlorocebus_sabaeus
ENSUMAG00000015351	CNOT4	67	99.465	ENSCHOG00000010412	CNOT4	65	99.465	Choloepus_hoffmanni
ENSUMAG00000015351	CNOT4	95	96.186	ENSCPBG00000004959	CNOT4	99	96.186	Chrysemys_picta_bellii
ENSUMAG00000015351	CNOT4	100	98.783	ENSCANG00000029319	CNOT4	100	98.783	Colobus_angolensis_palliatus
ENSUMAG00000015351	CNOT4	100	99.478	ENSCGRG00001014651	Cnot4	100	99.478	Cricetulus_griseus_chok1gshd
ENSUMAG00000015351	CNOT4	100	98.783	ENSCGRG00000005727	Cnot4	100	98.783	Cricetulus_griseus_crigri
ENSUMAG00000015351	CNOT4	94	89.299	ENSCSEG00000015080	cnot4a	84	89.299	Cynoglossus_semilaevis
ENSUMAG00000015351	CNOT4	95	88.321	ENSCVAG00000009399	cnot4a	99	74.080	Cyprinodon_variegatus
ENSUMAG00000015351	CNOT4	94	68.627	ENSDARG00000007639	cnot4b	99	66.335	Danio_rerio
ENSUMAG00000015351	CNOT4	95	69.816	ENSDARG00000007045	cnot4a	99	69.330	Danio_rerio
ENSUMAG00000015351	CNOT4	95	98.449	ENSDNOG00000009409	CNOT4	99	98.449	Dasypus_novemcinctus
ENSUMAG00000015351	CNOT4	100	99.478	ENSDORG00000012268	Cnot4	100	99.478	Dipodomys_ordii
ENSUMAG00000015351	CNOT4	94	95.941	ENSETEG00000013407	CNOT4	89	95.387	Echinops_telfairi
ENSUMAG00000015351	CNOT4	100	99.304	ENSEASG00005014430	CNOT4	100	99.304	Equus_asinus_asinus
ENSUMAG00000015351	CNOT4	100	99.304	ENSECAG00000020262	CNOT4	100	99.304	Equus_caballus
ENSUMAG00000015351	CNOT4	94	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSUMAG00000015351	CNOT4	96	73.235	ENSELUG00000011540	cnot4b	97	71.508	Esox_lucius
ENSUMAG00000015351	CNOT4	100	99.304	ENSFCAG00000011904	CNOT4	100	99.304	Felis_catus
ENSUMAG00000015351	CNOT4	95	89.168	ENSFALG00000011194	CNOT4	99	89.168	Ficedula_albicollis
ENSUMAG00000015351	CNOT4	100	99.478	ENSFDAG00000013525	CNOT4	100	99.478	Fukomys_damarensis
ENSUMAG00000015351	CNOT4	94	88.321	ENSFHEG00000006608	cnot4a	99	73.435	Fundulus_heteroclitus
ENSUMAG00000015351	CNOT4	94	60.156	ENSGMOG00000001329	cnot4a	97	62.468	Gadus_morhua
ENSUMAG00000015351	CNOT4	94	96.863	ENSGALG00000011682	CNOT4	99	95.480	Gallus_gallus
ENSUMAG00000015351	CNOT4	94	75.134	ENSGACG00000004276	cnot4a	99	70.929	Gasterosteus_aculeatus
ENSUMAG00000015351	CNOT4	95	95.621	ENSGAGG00000017331	CNOT4	99	95.621	Gopherus_agassizii
ENSUMAG00000015351	CNOT4	91	98.081	ENSGGOG00000000142	CNOT4	99	98.113	Gorilla_gorilla
ENSUMAG00000015351	CNOT4	95	88.321	ENSHBUG00000000027	cnot4a	91	88.321	Haplochromis_burtoni
ENSUMAG00000015351	CNOT4	100	99.478	ENSHGLG00000011533	CNOT4	100	99.478	Heterocephalus_glaber_female
ENSUMAG00000015351	CNOT4	100	99.478	ENSHGLG00100013058	CNOT4	100	99.478	Heterocephalus_glaber_male
ENSUMAG00000015351	CNOT4	94	87.226	ENSHCOG00000015815	cnot4a	91	87.226	Hippocampus_comes
ENSUMAG00000015351	CNOT4	94	71.728	ENSIPUG00000016994	cnot4b	99	70.387	Ictalurus_punctatus
ENSUMAG00000015351	CNOT4	94	73.381	ENSIPUG00000006393	cnot4	99	71.756	Ictalurus_punctatus
ENSUMAG00000015351	CNOT4	100	99.130	ENSSTOG00000007717	CNOT4	100	99.130	Ictidomys_tridecemlineatus
ENSUMAG00000015351	CNOT4	100	81.217	ENSJJAG00000019991	-	100	81.217	Jaculus_jaculus
ENSUMAG00000015351	CNOT4	100	98.783	ENSJJAG00000016618	Cnot4	100	98.783	Jaculus_jaculus
ENSUMAG00000015351	CNOT4	94	75.492	ENSKMAG00000004581	cnot4a	99	72.477	Kryptolebias_marmoratus
ENSUMAG00000015351	CNOT4	95	66.749	ENSLBEG00000009999	cnot4a	99	66.749	Labrus_bergylta
ENSUMAG00000015351	CNOT4	94	84.175	ENSLACG00000002647	CNOT4	99	84.012	Latimeria_chalumnae
ENSUMAG00000015351	CNOT4	94	79.054	ENSLOCG00000016126	cnot4a	99	77.243	Lepisosteus_oculatus
ENSUMAG00000015351	CNOT4	95	98.025	ENSLAFG00000000709	CNOT4	99	98.025	Loxodonta_africana
ENSUMAG00000015351	CNOT4	100	98.957	ENSMFAG00000046349	CNOT4	100	98.957	Macaca_fascicularis
ENSUMAG00000015351	CNOT4	100	99.652	ENSMMUG00000016181	CNOT4	100	99.652	Macaca_mulatta
ENSUMAG00000015351	CNOT4	100	98.957	ENSMNEG00000042164	CNOT4	100	98.957	Macaca_nemestrina
ENSUMAG00000015351	CNOT4	100	98.957	ENSMLEG00000032709	CNOT4	100	98.957	Mandrillus_leucophaeus
ENSUMAG00000015351	CNOT4	95	89.299	ENSMAMG00000023194	cnot4a	91	89.299	Mastacembelus_armatus
ENSUMAG00000015351	CNOT4	95	88.321	ENSMZEG00005007312	cnot4a	91	88.321	Maylandia_zebra
ENSUMAG00000015351	CNOT4	95	88.639	ENSMGAG00000011788	CNOT4	99	88.639	Meleagris_gallopavo
ENSUMAG00000015351	CNOT4	100	99.478	ENSMAUG00000020415	Cnot4	100	99.478	Mesocricetus_auratus
ENSUMAG00000015351	CNOT4	100	100.000	ENSMICG00000001667	CNOT4	100	100.000	Microcebus_murinus
ENSUMAG00000015351	CNOT4	100	99.304	ENSMOCG00000020955	Cnot4	100	99.304	Microtus_ochrogaster
ENSUMAG00000015351	CNOT4	94	75.774	ENSMMOG00000014565	cnot4a	97	74.875	Mola_mola
ENSUMAG00000015351	CNOT4	95	96.610	ENSMODG00000014068	CNOT4	99	96.610	Monodelphis_domestica
ENSUMAG00000015351	CNOT4	94	89.299	ENSMALG00000011662	cnot4a	82	69.492	Monopterus_albus
ENSUMAG00000015351	CNOT4	100	99.133	MGP_CAROLIEiJ_G0028217	Cnot4	100	99.133	Mus_caroli
ENSUMAG00000015351	CNOT4	100	99.304	ENSMUSG00000038784	Cnot4	100	99.304	Mus_musculus
ENSUMAG00000015351	CNOT4	100	99.304	MGP_PahariEiJ_G0021974	Cnot4	100	99.304	Mus_pahari
ENSUMAG00000015351	CNOT4	100	98.957	MGP_SPRETEiJ_G0029216	Cnot4	100	98.957	Mus_spretus
ENSUMAG00000015351	CNOT4	95	99.436	ENSMPUG00000004089	CNOT4	99	99.436	Mustela_putorius_furo
ENSUMAG00000015351	CNOT4	94	99.816	ENSMLUG00000008260	CNOT4	99	99.373	Myotis_lucifugus
ENSUMAG00000015351	CNOT4	100	99.304	ENSNGAG00000015030	Cnot4	100	99.304	Nannospalax_galili
ENSUMAG00000015351	CNOT4	94	72.531	ENSNBRG00000021144	cnot4a	99	71.407	Neolamprologus_brichardi
ENSUMAG00000015351	CNOT4	100	99.130	ENSNLEG00000013352	CNOT4	100	99.130	Nomascus_leucogenys
ENSUMAG00000015351	CNOT4	92	80.290	ENSOPRG00000001023	CNOT4	90	80.290	Ochotona_princeps
ENSUMAG00000015351	CNOT4	100	98.783	ENSODEG00000012975	CNOT4	100	98.783	Octodon_degus
ENSUMAG00000015351	CNOT4	95	88.321	ENSONIG00000008656	cnot4a	91	88.321	Oreochromis_niloticus
ENSUMAG00000015351	CNOT4	95	95.634	ENSOANG00000005006	CNOT4	99	95.634	Ornithorhynchus_anatinus
ENSUMAG00000015351	CNOT4	95	98.731	ENSOCUG00000013448	CNOT4	99	98.731	Oryctolagus_cuniculus
ENSUMAG00000015351	CNOT4	94	75.868	ENSORLG00000003727	cnot4a	99	72.657	Oryzias_latipes
ENSUMAG00000015351	CNOT4	94	75.315	ENSORLG00020015684	cnot4a	99	72.231	Oryzias_latipes_hni
ENSUMAG00000015351	CNOT4	94	75.868	ENSORLG00015008470	cnot4a	99	72.657	Oryzias_latipes_hsok
ENSUMAG00000015351	CNOT4	94	74.406	ENSOMEG00000011084	cnot4a	99	71.889	Oryzias_melastigma
ENSUMAG00000015351	CNOT4	95	99.577	ENSOGAG00000015499	CNOT4	99	99.577	Otolemur_garnettii
ENSUMAG00000015351	CNOT4	95	99.011	ENSOARG00000008803	CNOT4	99	99.011	Ovis_aries
ENSUMAG00000015351	CNOT4	100	99.304	ENSPPAG00000041937	CNOT4	100	99.304	Pan_paniscus
ENSUMAG00000015351	CNOT4	100	100.000	ENSPPRG00000023940	CNOT4	100	100.000	Panthera_pardus
ENSUMAG00000015351	CNOT4	100	99.304	ENSPTIG00000016601	CNOT4	100	99.304	Panthera_tigris_altaica
ENSUMAG00000015351	CNOT4	100	99.304	ENSPTRG00000019727	CNOT4	100	99.304	Pan_troglodytes
ENSUMAG00000015351	CNOT4	100	99.478	ENSPANG00000017724	CNOT4	100	99.478	Papio_anubis
ENSUMAG00000015351	CNOT4	94	73.443	ENSPKIG00000018137	cnot4a	99	71.651	Paramormyrops_kingsleyae
ENSUMAG00000015351	CNOT4	95	87.995	ENSPSIG00000011256	CNOT4	99	87.995	Pelodiscus_sinensis
ENSUMAG00000015351	CNOT4	99	72.978	ENSPMGG00000005671	cnot4a	99	73.030	Periophthalmus_magnuspinnatus
ENSUMAG00000015351	CNOT4	100	99.304	ENSPEMG00000021566	Cnot4	100	99.304	Peromyscus_maniculatus_bairdii
ENSUMAG00000015351	CNOT4	94	97.238	ENSPCIG00000029622	CNOT4	95	96.186	Phascolarctos_cinereus
ENSUMAG00000015351	CNOT4	55	88.321	ENSPFOG00000002228	cnot4a	99	59.828	Poecilia_formosa
ENSUMAG00000015351	CNOT4	94	75.681	ENSPLAG00000001780	cnot4a	99	72.713	Poecilia_latipinna
ENSUMAG00000015351	CNOT4	94	75.681	ENSPMEG00000006852	cnot4a	99	72.713	Poecilia_mexicana
ENSUMAG00000015351	CNOT4	94	74.240	ENSPREG00000008171	cnot4a	99	70.929	Poecilia_reticulata
ENSUMAG00000015351	CNOT4	95	98.731	ENSPPYG00000018026	CNOT4	99	98.731	Pongo_abelii
ENSUMAG00000015351	CNOT4	100	99.304	ENSPCOG00000019907	CNOT4	100	99.304	Propithecus_coquereli
ENSUMAG00000015351	CNOT4	94	99.446	ENSPVAG00000004905	CNOT4	90	97.391	Pteropus_vampyrus
ENSUMAG00000015351	CNOT4	95	88.321	ENSPNYG00000004276	cnot4a	91	88.321	Pundamilia_nyererei
ENSUMAG00000015351	CNOT4	95	91.513	ENSPNAG00000020433	cnot4a	99	71.918	Pygocentrus_nattereri
ENSUMAG00000015351	CNOT4	94	76.408	ENSPNAG00000008679	cnot4b	99	74.513	Pygocentrus_nattereri
ENSUMAG00000015351	CNOT4	94	98.339	ENSRNOG00000010795	Cnot4	99	97.320	Rattus_norvegicus
ENSUMAG00000015351	CNOT4	100	99.652	ENSRBIG00000043977	CNOT4	100	99.652	Rhinopithecus_bieti
ENSUMAG00000015351	CNOT4	100	98.783	ENSSBOG00000020808	CNOT4	100	98.783	Saimiri_boliviensis_boliviensis
ENSUMAG00000015351	CNOT4	94	97.601	ENSSHAG00000013639	CNOT4	99	96.469	Sarcophilus_harrisii
ENSUMAG00000015351	CNOT4	95	92.251	ENSSFOG00015017285	CNOT4	91	92.251	Scleropages_formosus
ENSUMAG00000015351	CNOT4	95	90.406	ENSSFOG00015002019	cnot4a	90	90.406	Scleropages_formosus
ENSUMAG00000015351	CNOT4	94	74.506	ENSSMAG00000008614	cnot4a	99	72.961	Scophthalmus_maximus
ENSUMAG00000015351	CNOT4	95	89.299	ENSSDUG00000022635	cnot4a	91	89.299	Seriola_dumerili
ENSUMAG00000015351	CNOT4	94	72.101	ENSSDUG00000018585	cnot4b	99	71.207	Seriola_dumerili
ENSUMAG00000015351	CNOT4	94	62.887	ENSSLDG00000014347	cnot4b	99	57.377	Seriola_lalandi_dorsalis
ENSUMAG00000015351	CNOT4	95	89.299	ENSSLDG00000015770	cnot4a	91	89.299	Seriola_lalandi_dorsalis
ENSUMAG00000015351	CNOT4	94	97.053	ENSSPUG00000004677	CNOT4	99	96.075	Sphenodon_punctatus
ENSUMAG00000015351	CNOT4	95	89.299	ENSSPAG00000012329	cnot4a	91	89.299	Stegastes_partitus
ENSUMAG00000015351	CNOT4	100	99.826	ENSSSCG00000021354	CNOT4	100	99.826	Sus_scrofa
ENSUMAG00000015351	CNOT4	95	89.300	ENSTGUG00000009161	CNOT4	99	89.300	Taeniopygia_guttata
ENSUMAG00000015351	CNOT4	95	82.508	ENSTRUG00000016861	cnot4a	95	82.508	Takifugu_rubripes
ENSUMAG00000015351	CNOT4	94	73.022	ENSTNIG00000016000	cnot4a	99	70.396	Tetraodon_nigroviridis
ENSUMAG00000015351	CNOT4	94	97.601	ENSTBEG00000002202	CNOT4	86	94.196	Tupaia_belangeri
ENSUMAG00000015351	CNOT4	94	99.263	ENSTTRG00000005122	CNOT4	90	98.553	Tursiops_truncatus
ENSUMAG00000015351	CNOT4	100	100.000	ENSUAMG00000026759	CNOT4	100	100.000	Ursus_americanus
ENSUMAG00000015351	CNOT4	100	100.000	ENSVVUG00000006200	CNOT4	100	100.000	Vulpes_vulpes
ENSUMAG00000015351	CNOT4	94	98.182	ENSXETG00000010594	cnot4	89	98.182	Xenopus_tropicalis
ENSUMAG00000015351	CNOT4	94	72.396	ENSXCOG00000020824	cnot4a	98	71.341	Xiphophorus_couchianus
ENSUMAG00000015351	CNOT4	94	74.725	ENSXMAG00000016984	cnot4a	99	71.096	Xiphophorus_maculatus