EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000015574 (Gene tree)
Gene ID: 103656484
Gene Symbol: -
Alias: -
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 32243 bases
Position: chrKK499694.1:397340-429582
Accession: 103656484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000021316	MMR_HSR1	PF01926.23	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000025245	-	1394	-	ENSUMAP00000021316	206 (aa)	XP_008682099	UPI0004DFED28

Gene Model

Click here to download ENSUMAG00000015574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000015574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000015574	-	85	31.461	ENSUMAG00000000492	RAB36	54	33.750
ENSUMAG00000015574	-	81	33.133	ENSUMAG00000011722	NRAS	87	33.133
ENSUMAG00000015574	-	92	45.833	ENSUMAG00000003596	RAB14	76	49.390
ENSUMAG00000015574	-	94	40.299	ENSUMAG00000018376	RAB25	79	43.529
ENSUMAG00000015574	-	87	50.000	ENSUMAG00000004940	RAB2B	84	50.000
ENSUMAG00000015574	-	79	34.132	ENSUMAG00000022558	DNAJC27	61	34.132
ENSUMAG00000015574	-	83	39.884	ENSUMAG00000017386	RAB39B	81	39.884
ENSUMAG00000015574	-	93	45.876	ENSUMAG00000021038	RAB1A	91	47.253
ENSUMAG00000015574	-	79	39.521	ENSUMAG00000015081	RAB7A	90	39.521
ENSUMAG00000015574	-	95	36.683	ENSUMAG00000001213	RAB9B	83	39.759
ENSUMAG00000015574	-	82	48.521	ENSUMAG00000023572	RAB30	83	48.521
ENSUMAG00000015574	-	70	45.578	ENSUMAG00000011821	RAB33A	63	45.578
ENSUMAG00000015574	-	66	48.905	ENSUMAG00000014594	RAB11B	67	48.905
ENSUMAG00000015574	-	90	35.052	ENSUMAG00000018629	RAB23	81	35.052
ENSUMAG00000015574	-	94	31.795	ENSUMAG00000005506	-	87	32.530
ENSUMAG00000015574	-	93	46.392	ENSUMAG00000011180	RAB1B	81	43.077
ENSUMAG00000015574	-	93	41.624	ENSUMAG00000018295	RAB5A	85	43.784
ENSUMAG00000015574	-	92	40.415	ENSUMAG00000023270	RAB5C	85	41.081
ENSUMAG00000015574	-	94	31.188	ENSUMAG00000014965	MRAS	71	35.882
ENSUMAG00000015574	-	93	37.755	ENSUMAG00000019370	-	84	39.645
ENSUMAG00000015574	-	87	39.130	ENSUMAG00000014975	RAB33B	82	39.130
ENSUMAG00000015574	-	94	35.644	ENSUMAG00000010248	RAB6A	84	41.935
ENSUMAG00000015574	-	92	31.053	ENSUMAG00000003274	KRAS	87	33.537
ENSUMAG00000015574	-	78	47.531	ENSUMAG00000012273	RAB11A	75	47.531
ENSUMAG00000015574	-	87	42.778	ENSUMAG00000016263	RAB5B	80	42.778
ENSUMAG00000015574	-	72	34.641	ENSUMAG00000002671	RERG	74	34.641
ENSUMAG00000015574	-	72	38.255	ENSUMAG00000017116	-	65	38.255
ENSUMAG00000015574	-	93	36.923	ENSUMAG00000005348	-	84	38.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000015574	-	100	87.864	ENSAPOG00000010760	rab18a	100	87.864	Acanthochromis_polyacanthus
ENSUMAG00000015574	-	100	75.728	ENSACIG00000009617	rab18a	100	75.728	Amphilophus_citrinellus
ENSUMAG00000015574	-	100	87.379	ENSAOCG00000016233	rab18a	100	87.379	Amphiprion_ocellaris
ENSUMAG00000015574	-	100	87.379	ENSAPEG00000005392	rab18a	100	87.379	Amphiprion_percula
ENSUMAG00000015574	-	100	88.350	ENSATEG00000021911	rab18a	100	88.350	Anabas_testudineus
ENSUMAG00000015574	-	100	92.718	ENSACAG00000005463	-	100	92.233	Anolis_carolinensis
ENSUMAG00000015574	-	100	86.893	ENSACLG00000011484	rab18a	100	86.893	Astatotilapia_calliptera
ENSUMAG00000015574	-	100	94.175	ENSCPBG00000015839	-	100	94.175	Chrysemys_picta_bellii
ENSUMAG00000015574	-	96	71.144	ENSCPBG00000027619	-	93	73.404	Chrysemys_picta_bellii
ENSUMAG00000015574	-	97	74.500	ENSCING00000006838	-	95	77.249	Ciona_intestinalis
ENSUMAG00000015574	-	97	72.500	ENSCSAVG00000010348	-	94	75.532	Ciona_savignyi
ENSUMAG00000015574	-	100	87.864	ENSCSEG00000011816	rab18a	100	87.864	Cynoglossus_semilaevis
ENSUMAG00000015574	-	91	88.830	ENSCVAG00000015451	rab18a	100	86.408	Cyprinodon_variegatus
ENSUMAG00000015574	-	100	81.553	ENSDARG00000055291	rab18a	100	81.068	Danio_rerio
ENSUMAG00000015574	-	100	89.320	ENSELUG00000003805	rab18a	100	89.320	Esox_lucius
ENSUMAG00000015574	-	91	90.426	ENSFHEG00000019455	rab18a	100	87.864	Fundulus_heteroclitus
ENSUMAG00000015574	-	91	89.362	ENSGAFG00000002790	rab18a	100	87.864	Gambusia_affinis
ENSUMAG00000015574	-	100	94.175	ENSGAGG00000015642	-	100	94.175	Gopherus_agassizii
ENSUMAG00000015574	-	100	86.893	ENSHBUG00000001518	rab18a	100	86.893	Haplochromis_burtoni
ENSUMAG00000015574	-	99	88.293	ENSLBEG00000005861	rab18a	95	88.293	Labrus_bergylta
ENSUMAG00000015574	-	93	94.792	ENSLACG00000009310	rab18a	100	94.175	Latimeria_chalumnae
ENSUMAG00000015574	-	100	91.262	ENSLOCG00000007491	rab18a	100	91.262	Lepisosteus_oculatus
ENSUMAG00000015574	-	100	88.350	ENSMAMG00000014320	rab18a	100	88.350	Mastacembelus_armatus
ENSUMAG00000015574	-	100	86.408	ENSMZEG00005017235	rab18a	100	86.408	Maylandia_zebra
ENSUMAG00000015574	-	100	88.835	ENSMALG00000009813	rab18a	100	88.835	Monopterus_albus
ENSUMAG00000015574	-	100	86.893	ENSNBRG00000013507	rab18a	100	86.893	Neolamprologus_brichardi
ENSUMAG00000015574	-	91	89.362	ENSORLG00000004624	rab18a	100	86.408	Oryzias_latipes
ENSUMAG00000015574	-	91	89.894	ENSORLG00020008333	rab18a	100	86.893	Oryzias_latipes_hni
ENSUMAG00000015574	-	91	89.362	ENSORLG00015004739	rab18a	100	86.408	Oryzias_latipes_hsok
ENSUMAG00000015574	-	91	89.362	ENSOMEG00000020605	rab18a	100	86.893	Oryzias_melastigma
ENSUMAG00000015574	-	100	88.350	ENSPKIG00000009825	rab18a	100	88.350	Paramormyrops_kingsleyae
ENSUMAG00000015574	-	100	85.437	ENSPMGG00000020409	-	100	85.437	Periophthalmus_magnuspinnatus
ENSUMAG00000015574	-	91	89.894	ENSPFOG00000007571	rab18a	100	88.350	Poecilia_formosa
ENSUMAG00000015574	-	91	89.894	ENSPLAG00000010104	rab18a	100	88.350	Poecilia_latipinna
ENSUMAG00000015574	-	91	89.894	ENSPMEG00000013085	rab18a	100	88.350	Poecilia_mexicana
ENSUMAG00000015574	-	91	89.894	ENSPREG00000005923	rab18a	83	88.350	Poecilia_reticulata
ENSUMAG00000015574	-	100	86.893	ENSPNYG00000007064	rab18a	100	86.893	Pundamilia_nyererei
ENSUMAG00000015574	-	99	82.266	ENSPNAG00000011548	rab18a	92	87.432	Pygocentrus_nattereri
ENSUMAG00000015574	-	91	93.085	ENSSFOG00015017444	rab18a	84	89.320	Scleropages_formosus
ENSUMAG00000015574	-	89	91.848	ENSSMAG00000002969	rab18a	100	87.440	Scophthalmus_maximus
ENSUMAG00000015574	-	91	92.021	ENSSDUG00000003823	rab18a	100	88.835	Seriola_dumerili
ENSUMAG00000015574	-	91	92.021	ENSSLDG00000006977	rab18a	100	88.835	Seriola_lalandi_dorsalis
ENSUMAG00000015574	-	100	94.175	ENSSPUG00000017677	-	100	94.175	Sphenodon_punctatus
ENSUMAG00000015574	-	100	85.922	ENSTRUG00000004984	rab18a	100	85.922	Takifugu_rubripes
ENSUMAG00000015574	-	100	89.806	ENSXETG00000004556	rab18	100	89.806	Xenopus_tropicalis
ENSUMAG00000015574	-	91	89.894	ENSXMAG00000024122	rab18a	100	88.350	Xiphophorus_maculatus