EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000015789 (Gene tree)
Gene ID: 103662677
Gene Symbol: NCL
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 10490 bases
Position: chrKK498593.1:8322875-8333364
Accession: 103662677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000021592	RRM_1	PF00076.22	2.3e-58	1	4
ENSUMAP00000021592	RRM_1	PF00076.22	2.3e-58	2	4
ENSUMAP00000021592	RRM_1	PF00076.22	2.3e-58	3	4
ENSUMAP00000021592	RRM_1	PF00076.22	2.3e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000025580	NCL-201	3412	-	ENSUMAP00000021592	712 (aa)	XP_008688572	UPI0004E0002D

Gene Model

Click here to download ENSUMAG00000015789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000015789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000015789	NCL	92	88.974	ENSG00000115053	NCL	100	90.541	Homo_sapiens
ENSUMAG00000015789	NCL	100	97.629	ENSAMEG00000016289	NCL	100	97.629	Ailuropoda_melanoleuca
ENSUMAG00000015789	NCL	92	88.515	ENSANAG00000035814	-	62	97.039	Aotus_nancymaae
ENSUMAG00000015789	NCL	99	70.085	ENSANAG00000024378	-	85	80.303	Aotus_nancymaae
ENSUMAG00000015789	NCL	77	92.977	ENSBTAG00000026909	-	95	92.977	Bos_taurus
ENSUMAG00000015789	NCL	89	90.952	ENSBTAG00000051320	-	77	90.610	Bos_taurus
ENSUMAG00000015789	NCL	54	90.984	ENSBTAG00000050728	-	81	90.984	Bos_taurus
ENSUMAG00000015789	NCL	94	87.281	ENSBTAG00000016174	NCL	61	98.633	Bos_taurus
ENSUMAG00000015789	NCL	92	85.258	ENSCJAG00000013538	NCL	100	86.750	Callithrix_jacchus
ENSUMAG00000015789	NCL	92	95.267	ENSCAFG00000011037	NCL	92	95.115	Canis_familiaris
ENSUMAG00000015789	NCL	84	95.183	ENSCAFG00020023145	NCL	89	95.017	Canis_lupus_dingo
ENSUMAG00000015789	NCL	85	87.150	ENSCHIG00000010894	-	66	98.178	Capra_hircus
ENSUMAG00000015789	NCL	92	80.728	ENSCHIG00000026149	-	53	91.029	Capra_hircus
ENSUMAG00000015789	NCL	92	96.903	ENSCHIG00000021052	-	99	96.853	Capra_hircus
ENSUMAG00000015789	NCL	92	64.264	ENSCHIG00000012143	-	60	82.850	Capra_hircus
ENSUMAG00000015789	NCL	90	74.844	ENSTSYG00000036886	-	75	85.185	Carlito_syrichta
ENSUMAG00000015789	NCL	92	87.215	ENSTSYG00000004355	-	53	96.834	Carlito_syrichta
ENSUMAG00000015789	NCL	95	85.017	ENSTSYG00000029779	-	50	95.973	Carlito_syrichta
ENSUMAG00000015789	NCL	91	79.263	ENSCAPG00000009405	NCL	61	89.749	Cavia_aperea
ENSUMAG00000015789	NCL	92	82.648	ENSCPOG00000001034	NCL	62	94.077	Cavia_porcellus
ENSUMAG00000015789	NCL	87	88.442	ENSCCAG00000000551	-	76	88.557	Cebus_capucinus
ENSUMAG00000015789	NCL	53	96.570	ENSCCAG00000021040	-	62	94.533	Cebus_capucinus
ENSUMAG00000015789	NCL	92	90.061	ENSCATG00000037033	NCL	62	97.494	Cercocebus_atys
ENSUMAG00000015789	NCL	92	82.801	ENSCLAG00000013080	NCL	100	82.427	Chinchilla_lanigera
ENSUMAG00000015789	NCL	62	97.273	ENSCSAG00000006660	NCL	95	97.273	Chlorocebus_sabaeus
ENSUMAG00000015789	NCL	61	77.346	ENSCHOG00000012860	NCL	78	81.746	Choloepus_hoffmanni
ENSUMAG00000015789	NCL	92	80.793	ENSCGRG00001024315	-	53	88.918	Cricetulus_griseus_chok1gshd
ENSUMAG00000015789	NCL	85	81.331	ENSCGRG00000017894	-	54	88.918	Cricetulus_griseus_crigri
ENSUMAG00000015789	NCL	92	87.823	ENSDNOG00000010783	-	92	87.519	Dasypus_novemcinctus
ENSUMAG00000015789	NCL	100	76.503	ENSDNOG00000046347	-	99	76.503	Dasypus_novemcinctus
ENSUMAG00000015789	NCL	92	77.761	ENSDORG00000012513	-	54	83.641	Dipodomys_ordii
ENSUMAG00000015789	NCL	51	73.224	ENSDORG00000023596	-	52	72.237	Dipodomys_ordii
ENSUMAG00000015789	NCL	85	79.672	ENSETEG00000018937	-	53	91.293	Echinops_telfairi
ENSUMAG00000015789	NCL	62	61.486	ENSETEG00000008553	-	82	64.267	Echinops_telfairi
ENSUMAG00000015789	NCL	72	66.938	ENSETEG00000008139	-	89	66.757	Echinops_telfairi
ENSUMAG00000015789	NCL	53	90.716	ENSETEG00000014756	-	86	90.765	Echinops_telfairi
ENSUMAG00000015789	NCL	89	91.446	ENSEASG00005008488	NCL	93	99.643	Equus_asinus_asinus
ENSUMAG00000015789	NCL	92	91.654	ENSECAG00000021868	NCL	100	94.737	Equus_caballus
ENSUMAG00000015789	NCL	85	81.579	ENSEEUG00000005913	NCL	54	90.501	Erinaceus_europaeus
ENSUMAG00000015789	NCL	92	94.055	ENSFCAG00000027622	NCL	92	94.207	Felis_catus
ENSUMAG00000015789	NCL	91	86.022	ENSFDAG00000014291	NCL	92	83.410	Fukomys_damarensis
ENSUMAG00000015789	NCL	92	89.313	ENSGGOG00000004300	NCL	81	88.383	Gorilla_gorilla
ENSUMAG00000015789	NCL	91	76.037	ENSHGLG00000011069	-	55	85.450	Heterocephalus_glaber_female
ENSUMAG00000015789	NCL	92	85.236	ENSHGLG00000002031	-	62	94.761	Heterocephalus_glaber_female
ENSUMAG00000015789	NCL	56	80.348	ENSHGLG00100000745	-	82	84.350	Heterocephalus_glaber_male
ENSUMAG00000015789	NCL	92	84.779	ENSHGLG00100014537	-	62	94.533	Heterocephalus_glaber_male
ENSUMAG00000015789	NCL	55	82.097	ENSJJAG00000016165	Ncl	55	82.097	Jaculus_jaculus
ENSUMAG00000015789	NCL	92	90.382	ENSMFAG00000040385	NCL	62	97.494	Macaca_fascicularis
ENSUMAG00000015789	NCL	92	90.382	ENSMMUG00000018094	NCL	62	97.494	Macaca_mulatta
ENSUMAG00000015789	NCL	62	93.439	ENSMNEG00000023839	NCL	64	97.494	Macaca_nemestrina
ENSUMAG00000015789	NCL	92	90.214	ENSMLEG00000028935	NCL	62	97.494	Mandrillus_leucophaeus
ENSUMAG00000015789	NCL	100	88.936	ENSMICG00000002538	-	92	87.615	Microcebus_murinus
ENSUMAG00000015789	NCL	92	71.669	ENSMICG00000029975	-	86	80.142	Microcebus_murinus
ENSUMAG00000015789	NCL	92	77.287	MGP_CAROLIEiJ_G0014362	Ncl	53	86.807	Mus_caroli
ENSUMAG00000015789	NCL	92	77.287	ENSMUSG00000026234	Ncl	53	86.544	Mus_musculus
ENSUMAG00000015789	NCL	92	77.660	MGP_PahariEiJ_G0027599	Ncl	53	86.544	Mus_pahari
ENSUMAG00000015789	NCL	92	77.169	MGP_SPRETEiJ_G0015164	Ncl	53	86.544	Mus_spretus
ENSUMAG00000015789	NCL	92	86.950	ENSMLUG00000014547	NCL	53	97.889	Myotis_lucifugus
ENSUMAG00000015789	NCL	92	80.360	ENSNGAG00000002454	-	53	89.974	Nannospalax_galili
ENSUMAG00000015789	NCL	53	73.867	ENSNGAG00000006188	-	54	73.087	Nannospalax_galili
ENSUMAG00000015789	NCL	85	75.686	ENSNLEG00000014107	-	60	82.390	Nomascus_leucogenys
ENSUMAG00000015789	NCL	91	81.193	ENSODEG00000003281	-	91	80.611	Octodon_degus
ENSUMAG00000015789	NCL	91	67.500	ENSODEG00000007803	-	90	66.964	Octodon_degus
ENSUMAG00000015789	NCL	62	79.365	ENSODEG00000002441	-	89	84.746	Octodon_degus
ENSUMAG00000015789	NCL	78	87.599	ENSOGAG00000027852	NCL	83	87.599	Otolemur_garnettii
ENSUMAG00000015789	NCL	54	80.570	ENSOARG00000004072	-	61	81.003	Ovis_aries
ENSUMAG00000015789	NCL	70	91.324	ENSOARG00000013710	-	64	96.042	Ovis_aries
ENSUMAG00000015789	NCL	91	84.018	ENSOARG00000020709	-	56	96.859	Ovis_aries
ENSUMAG00000015789	NCL	92	88.055	ENSPPAG00000011619	NCL	62	97.494	Pan_paniscus
ENSUMAG00000015789	NCL	92	94.046	ENSPPRG00000012603	NCL	92	94.198	Panthera_pardus
ENSUMAG00000015789	NCL	91	93.837	ENSPTIG00000010393	NCL	91	93.991	Panthera_tigris_altaica
ENSUMAG00000015789	NCL	92	89.787	ENSPTRG00000013025	NCL	81	88.383	Pan_troglodytes
ENSUMAG00000015789	NCL	92	90.382	ENSPANG00000010292	NCL	62	97.494	Papio_anubis
ENSUMAG00000015789	NCL	100	83.682	ENSPPYG00000013265	NCL	53	86.684	Pongo_abelii
ENSUMAG00000015789	NCL	92	88.280	ENSPCOG00000003051	-	53	96.306	Propithecus_coquereli
ENSUMAG00000015789	NCL	91	82.589	ENSPCOG00000004160	-	86	89.418	Propithecus_coquereli
ENSUMAG00000015789	NCL	92	90.244	ENSPVAG00000000297	NCL	62	98.633	Pteropus_vampyrus
ENSUMAG00000015789	NCL	92	79.818	ENSRNOG00000018273	Ncl	53	88.654	Rattus_norvegicus
ENSUMAG00000015789	NCL	92	84.839	ENSRBIG00000037525	-	54	94.459	Rhinopithecus_bieti
ENSUMAG00000015789	NCL	66	97.232	ENSRBIG00000035396	-	88	95.302	Rhinopithecus_bieti
ENSUMAG00000015789	NCL	99	85.763	ENSRROG00000036103	-	54	95.495	Rhinopithecus_roxellana
ENSUMAG00000015789	NCL	92	89.313	ENSRROG00000028756	-	86	98.577	Rhinopithecus_roxellana
ENSUMAG00000015789	NCL	81	89.294	ENSSBOG00000027549	-	94	89.294	Saimiri_boliviensis_boliviensis
ENSUMAG00000015789	NCL	53	96.306	ENSSBOG00000029193	-	62	96.811	Saimiri_boliviensis_boliviensis
ENSUMAG00000015789	NCL	90	74.429	ENSSBOG00000023094	-	76	74.661	Saimiri_boliviensis_boliviensis
ENSUMAG00000015789	NCL	92	89.157	ENSSSCG00000016275	NCL	52	97.889	Sus_scrofa
ENSUMAG00000015789	NCL	55	84.697	ENSTBEG00000001546	-	53	84.697	Tupaia_belangeri
ENSUMAG00000015789	NCL	65	81.870	ENSTBEG00000002469	-	66	81.714	Tupaia_belangeri
ENSUMAG00000015789	NCL	92	90.337	ENSTTRG00000009094	NCL	91	89.571	Tursiops_truncatus
ENSUMAG00000015789	NCL	74	99.231	ENSUAMG00000005639	NCL	100	99.205	Ursus_americanus
ENSUMAG00000015789	NCL	69	89.437	ENSVPAG00000001796	NCL	69	89.437	Vicugna_pacos
ENSUMAG00000015789	NCL	100	92.697	ENSVVUG00000025564	NCL	100	92.556	Vulpes_vulpes