EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000016220 (Gene tree)
Gene ID: 103677588
Gene Symbol: ZC3H13
Alias: DKFZp434D1812|KIAA0853|Xio
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 90658 bases
Position: chrKK498739.1:17638588-17729245
Accession: 20368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000022221	zf-CCCH	PF00642.24	5.8e-07	1	1
ENSUMAP00000022212	zf-CCCH	PF00642.24	7.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000026336	ZC3H13-201	4911	-	ENSUMAP00000022212	1636 (aa)	-	-
ENSUMAT00000026343	ZC3H13-202	4116	-	ENSUMAP00000022221	1368 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000016220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000016220's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000016220	ZC3H13	100	97.172	ENSAMEG00000013117	ZC3H13	100	97.172	Ailuropoda_melanoleuca
ENSUMAG00000016220	ZC3H13	52	84.371	ENSANAG00000033079	ZC3H13	53	85.504	Aotus_nancymaae
ENSUMAG00000016220	ZC3H13	52	84.371	ENSCJAG00000016756	ZC3H13	53	85.164	Callithrix_jacchus
ENSUMAG00000016220	ZC3H13	100	95.187	ENSCAFG00000004511	ZC3H13	53	90.940	Canis_familiaris
ENSUMAG00000016220	ZC3H13	100	95.427	ENSCAFG00020019269	ZC3H13	98	98.807	Canis_lupus_dingo
ENSUMAG00000016220	ZC3H13	52	83.257	ENSCPOG00000000646	ZC3H13	53	83.257	Cavia_porcellus
ENSUMAG00000016220	ZC3H13	52	83.812	ENSCLAG00000000610	ZC3H13	53	81.952	Chinchilla_lanigera
ENSUMAG00000016220	ZC3H13	84	95.575	ENSCHOG00000009724	ZC3H13	87	95.575	Choloepus_hoffmanni
ENSUMAG00000016220	ZC3H13	52	84.199	ENSCANG00000037422	ZC3H13	53	85.763	Colobus_angolensis_palliatus
ENSUMAG00000016220	ZC3H13	52	82.857	ENSDNOG00000005390	ZC3H13	53	82.743	Dasypus_novemcinctus
ENSUMAG00000016220	ZC3H13	52	81.193	ENSDORG00000000600	Zc3h13	53	82.514	Dipodomys_ordii
ENSUMAG00000016220	ZC3H13	50	96.765	ENSECAG00000022843	ZC3H13	54	88.316	Equus_caballus
ENSUMAG00000016220	ZC3H13	50	98.529	ENSFCAG00000004877	ZC3H13	52	88.991	Felis_catus
ENSUMAG00000016220	ZC3H13	84	50.316	ENSGACG00000015166	zc3h13	72	53.470	Gasterosteus_aculeatus
ENSUMAG00000016220	ZC3H13	52	81.106	ENSJJAG00000019971	Zc3h13	53	80.827	Jaculus_jaculus
ENSUMAG00000016220	ZC3H13	68	64.875	ENSKMAG00000010701	zc3h13	61	47.619	Kryptolebias_marmoratus
ENSUMAG00000016220	ZC3H13	62	66.620	ENSLACG00000003806	ZC3H13	56	69.118	Latimeria_chalumnae
ENSUMAG00000016220	ZC3H13	50	95.294	ENSMMUG00000017025	ZC3H13	54	85.973	Macaca_mulatta
ENSUMAG00000016220	ZC3H13	72	91.803	ENSMLEG00000039387	ZC3H13	70	92.063	Mandrillus_leucophaeus
ENSUMAG00000016220	ZC3H13	52	84.580	ENSMICG00000014772	ZC3H13	53	85.244	Microcebus_murinus
ENSUMAG00000016220	ZC3H13	52	79.931	MGP_CAROLIEiJ_G0019512	Zc3h13	50	80.114	Mus_caroli
ENSUMAG00000016220	ZC3H13	52	79.817	ENSMUSG00000022000	Zc3h13	50	80.000	Mus_musculus
ENSUMAG00000016220	ZC3H13	52	79.817	MGP_PahariEiJ_G0030530	Zc3h13	50	80.000	Mus_pahari
ENSUMAG00000016220	ZC3H13	52	79.702	MGP_SPRETEiJ_G0020407	Zc3h13	51	79.886	Mus_spretus
ENSUMAG00000016220	ZC3H13	99	97.442	ENSMPUG00000001602	ZC3H13	100	93.609	Mustela_putorius_furo
ENSUMAG00000016220	ZC3H13	52	84.842	ENSNLEG00000002498	ZC3H13	53	86.086	Nomascus_leucogenys
ENSUMAG00000016220	ZC3H13	52	83.028	ENSODEG00000005178	ZC3H13	53	82.664	Octodon_degus
ENSUMAG00000016220	ZC3H13	89	50.943	ENSONIG00000012236	zc3h13	55	50.392	Oreochromis_niloticus
ENSUMAG00000016220	ZC3H13	100	81.696	ENSOCUG00000015173	ZC3H13	53	86.239	Oryctolagus_cuniculus
ENSUMAG00000016220	ZC3H13	52	84.501	ENSOGAG00000012032	ZC3H13	52	84.845	Otolemur_garnettii
ENSUMAG00000016220	ZC3H13	100	94.284	ENSPPRG00000005440	ZC3H13	100	94.284	Panthera_pardus
ENSUMAG00000016220	ZC3H13	52	88.876	ENSPTIG00000014867	ZC3H13	53	88.991	Panthera_tigris_altaica
ENSUMAG00000016220	ZC3H13	81	94.779	ENSPCAG00000001146	ZC3H13	77	93.173	Procavia_capensis
ENSUMAG00000016220	ZC3H13	62	97.838	ENSPVAG00000012353	ZC3H13	63	94.545	Pteropus_vampyrus
ENSUMAG00000016220	ZC3H13	52	79.863	ENSRNOG00000011237	Zc3h13	50	80.046	Rattus_norvegicus
ENSUMAG00000016220	ZC3H13	52	85.294	ENSRBIG00000010463	ZC3H13	53	85.973	Rhinopithecus_bieti
ENSUMAG00000016220	ZC3H13	51	92.791	ENSSARG00000007106	ZC3H13	50	93.098	Sorex_araneus
ENSUMAG00000016220	ZC3H13	88	87.902	ENSTTRG00000003611	ZC3H13	72	86.324	Tursiops_truncatus
ENSUMAG00000016220	ZC3H13	84	89.650	ENSVPAG00000005179	ZC3H13	84	89.650	Vicugna_pacos
ENSUMAG00000016220	ZC3H13	99	96.930	ENSVVUG00000028395	ZC3H13	100	95.427	Vulpes_vulpes
ENSUMAG00000016220	ZC3H13	78	62.721	ENSXETG00000014637	zc3h13	97	61.732	Xenopus_tropicalis