EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000016241 (Gene tree)
Gene ID: 103682470
Gene Symbol: PYM1
Alias: -
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 17273 bases
Position: chrKK498531.1:266864-284136
Accession: 103682470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000022180	Mago-bind	PF09282.10	4.3e-14	1	1
ENSUMAP00000022177	Mago-bind	PF09282.10	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000026298	PYM1-201	1802	-	ENSUMAP00000022177	306 (aa)	-	-
ENSUMAT00000026300	PYM1-202	1135	-	ENSUMAP00000022180	221 (aa)	XP_008710288	UPI0004DFFF80

Gene Model

Click here to download ENSUMAG00000016241's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03013	RNA transport	KEGG
umr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000016241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000016241	PYM1	84	92.973	ENSG00000170473	PYM1	94	91.667	Homo_sapiens
ENSUMAG00000016241	PYM1	85	56.000	ENSAPOG00000023045	pym1	89	56.316	Acanthochromis_polyacanthus
ENSUMAG00000016241	PYM1	85	91.979	ENSAMEG00000003091	PYM1	93	91.979	Ailuropoda_melanoleuca
ENSUMAG00000016241	PYM1	85	55.024	ENSACIG00000012769	pym1	89	57.143	Amphilophus_citrinellus
ENSUMAG00000016241	PYM1	85	56.784	ENSAOCG00000021358	pym1	89	57.812	Amphiprion_ocellaris
ENSUMAG00000016241	PYM1	85	56.784	ENSAPEG00000022679	pym1	89	57.812	Amphiprion_percula
ENSUMAG00000016241	PYM1	86	55.941	ENSATEG00000024022	pym1	89	58.947	Anabas_testudineus
ENSUMAG00000016241	PYM1	87	61.951	ENSACAG00000005714	PYM1	94	61.951	Anolis_carolinensis
ENSUMAG00000016241	PYM1	84	91.892	ENSANAG00000036967	PYM1	94	90.576	Aotus_nancymaae
ENSUMAG00000016241	PYM1	90	53.271	ENSAMXG00000007650	pym1	91	55.779	Astyanax_mexicanus
ENSUMAG00000016241	PYM1	84	91.351	ENSBTAG00000031146	PYM1	91	91.351	Bos_taurus
ENSUMAG00000016241	PYM1	84	91.351	ENSCJAG00000041077	PYM1	94	90.052	Callithrix_jacchus
ENSUMAG00000016241	PYM1	84	92.432	ENSCAFG00000000076	PYM1	89	94.444	Canis_familiaris
ENSUMAG00000016241	PYM1	84	92.432	ENSCAFG00020026099	PYM1	89	94.444	Canis_lupus_dingo
ENSUMAG00000016241	PYM1	85	88.770	ENSCHIG00000026207	PYM1	92	91.620	Capra_hircus
ENSUMAG00000016241	PYM1	84	91.351	ENSTSYG00000000787	PYM1	94	90.625	Carlito_syrichta
ENSUMAG00000016241	PYM1	81	91.620	ENSCAPG00000010374	PYM1	93	92.135	Cavia_aperea
ENSUMAG00000016241	PYM1	84	89.730	ENSCPOG00000031546	PYM1	91	90.217	Cavia_porcellus
ENSUMAG00000016241	PYM1	82	94.475	ENSCCAG00000026187	PYM1	91	94.915	Cebus_capucinus
ENSUMAG00000016241	PYM1	88	89.691	ENSCATG00000018801	PYM1	94	90.104	Cercocebus_atys
ENSUMAG00000016241	PYM1	84	84.324	ENSCLAG00000007964	PYM1	91	84.324	Chinchilla_lanigera
ENSUMAG00000016241	PYM1	81	93.855	ENSCSAG00000005291	PYM1	92	93.889	Chlorocebus_sabaeus
ENSUMAG00000016241	PYM1	85	38.384	ENSCING00000006448	-	89	40.314	Ciona_intestinalis
ENSUMAG00000016241	PYM1	88	39.815	ENSCSAVG00000009805	-	89	39.806	Ciona_savignyi
ENSUMAG00000016241	PYM1	87	83.854	ENSCANG00000019757	-	84	88.108	Colobus_angolensis_palliatus
ENSUMAG00000016241	PYM1	84	91.892	ENSCANG00000020338	-	94	90.104	Colobus_angolensis_palliatus
ENSUMAG00000016241	PYM1	84	86.559	ENSCGRG00001018051	-	94	85.938	Cricetulus_griseus_chok1gshd
ENSUMAG00000016241	PYM1	81	74.719	ENSCGRG00001004231	-	93	73.298	Cricetulus_griseus_chok1gshd
ENSUMAG00000016241	PYM1	81	74.719	ENSCGRG00000018933	-	93	73.298	Cricetulus_griseus_crigri
ENSUMAG00000016241	PYM1	84	86.486	ENSCGRG00000012495	-	93	87.766	Cricetulus_griseus_crigri
ENSUMAG00000016241	PYM1	80	53.439	ENSCSEG00000021531	pym1	88	55.789	Cynoglossus_semilaevis
ENSUMAG00000016241	PYM1	89	59.709	ENSCVAG00000017360	pym1	82	60.825	Cyprinodon_variegatus
ENSUMAG00000016241	PYM1	89	54.082	ENSDARG00000046024	pym1	91	52.000	Danio_rerio
ENSUMAG00000016241	PYM1	94	81.731	ENSDNOG00000048414	PYM1	94	81.731	Dasypus_novemcinctus
ENSUMAG00000016241	PYM1	84	88.649	ENSDORG00000029448	Pym1	94	88.482	Dipodomys_ordii
ENSUMAG00000016241	PYM1	86	35.294	FBgn0034918	Pym	89	33.831	Drosophila_melanogaster
ENSUMAG00000016241	PYM1	81	84.916	ENSETEG00000004461	-	94	85.000	Echinops_telfairi
ENSUMAG00000016241	PYM1	80	94.350	ENSEASG00005002271	PYM1	80	94.350	Equus_asinus_asinus
ENSUMAG00000016241	PYM1	84	91.892	ENSECAG00000011870	PYM1	91	92.391	Equus_caballus
ENSUMAG00000016241	PYM1	82	55.615	ENSELUG00000024250	pym1	88	57.297	Esox_lucius
ENSUMAG00000016241	PYM1	84	92.973	ENSFCAG00000013967	PYM1	94	93.229	Felis_catus
ENSUMAG00000016241	PYM1	84	88.108	ENSFDAG00000006314	PYM1	93	88.947	Fukomys_damarensis
ENSUMAG00000016241	PYM1	82	56.477	ENSFHEG00000005884	pym1	90	56.477	Fundulus_heteroclitus
ENSUMAG00000016241	PYM1	81	58.378	ENSGMOG00000007239	pym1	91	57.895	Gadus_morhua
ENSUMAG00000016241	PYM1	81	67.760	ENSGALG00000046169	PYM1	90	68.394	Gallus_gallus
ENSUMAG00000016241	PYM1	85	59.204	ENSGAFG00000003280	pym1	89	58.639	Gambusia_affinis
ENSUMAG00000016241	PYM1	90	51.980	ENSGACG00000010703	pym1	90	52.941	Gasterosteus_aculeatus
ENSUMAG00000016241	PYM1	84	62.121	ENSGAGG00000001973	PYM1	86	62.121	Gopherus_agassizii
ENSUMAG00000016241	PYM1	84	92.432	ENSGGOG00000043246	PYM1	94	91.146	Gorilla_gorilla
ENSUMAG00000016241	PYM1	80	56.915	ENSHBUG00000012719	pym1	89	58.421	Haplochromis_burtoni
ENSUMAG00000016241	PYM1	84	91.351	ENSHGLG00000017155	PYM1	94	90.625	Heterocephalus_glaber_female
ENSUMAG00000016241	PYM1	84	91.351	ENSHGLG00100015341	PYM1	94	93.296	Heterocephalus_glaber_male
ENSUMAG00000016241	PYM1	91	53.810	ENSHCOG00000007987	pym1	81	54.040	Hippocampus_comes
ENSUMAG00000016241	PYM1	90	54.460	ENSIPUG00000005975	wibga	91	55.556	Ictalurus_punctatus
ENSUMAG00000016241	PYM1	84	91.351	ENSSTOG00000014206	PYM1	92	92.308	Ictidomys_tridecemlineatus
ENSUMAG00000016241	PYM1	86	85.714	ENSJJAG00000013338	Pym1	94	86.387	Jaculus_jaculus
ENSUMAG00000016241	PYM1	85	54.286	ENSKMAG00000006351	pym1	92	52.427	Kryptolebias_marmoratus
ENSUMAG00000016241	PYM1	88	56.931	ENSLBEG00000015707	pym1	90	57.368	Labrus_bergylta
ENSUMAG00000016241	PYM1	85	60.606	ENSLACG00000014398	PYM1	91	60.914	Latimeria_chalumnae
ENSUMAG00000016241	PYM1	85	87.701	ENSLAFG00000002369	PYM1	91	89.130	Loxodonta_africana
ENSUMAG00000016241	PYM1	82	93.923	ENSMFAG00000003048	PYM1	94	91.099	Macaca_fascicularis
ENSUMAG00000016241	PYM1	84	91.892	ENSMMUG00000011002	PYM1	91	91.892	Macaca_mulatta
ENSUMAG00000016241	PYM1	82	93.923	ENSMNEG00000034677	PYM1	94	91.099	Macaca_nemestrina
ENSUMAG00000016241	PYM1	82	93.923	ENSMLEG00000007971	PYM1	94	91.099	Mandrillus_leucophaeus
ENSUMAG00000016241	PYM1	85	52.404	ENSMAMG00000001588	pym1	89	55.941	Mastacembelus_armatus
ENSUMAG00000016241	PYM1	80	56.383	ENSMZEG00005026458	pym1	89	57.895	Maylandia_zebra
ENSUMAG00000016241	PYM1	84	85.946	ENSMAUG00000007318	Pym1	93	87.293	Mesocricetus_auratus
ENSUMAG00000016241	PYM1	84	90.270	ENSMICG00000032962	PYM1	94	90.576	Microcebus_murinus
ENSUMAG00000016241	PYM1	86	84.127	ENSMOCG00000010208	Pym1	94	84.817	Microtus_ochrogaster
ENSUMAG00000016241	PYM1	89	53.695	ENSMMOG00000009301	pym1	89	56.684	Mola_mola
ENSUMAG00000016241	PYM1	85	55.051	ENSMALG00000013496	pym1	89	57.592	Monopterus_albus
ENSUMAG00000016241	PYM1	84	87.568	MGP_CAROLIEiJ_G0015953	Pym1	94	87.500	Mus_caroli
ENSUMAG00000016241	PYM1	84	88.649	ENSMUSG00000064030	Pym1	94	88.542	Mus_musculus
ENSUMAG00000016241	PYM1	84	86.486	MGP_PahariEiJ_G0031131	Pym1	92	87.766	Mus_pahari
ENSUMAG00000016241	PYM1	84	88.649	MGP_SPRETEiJ_G0016778	Pym1	94	88.542	Mus_spretus
ENSUMAG00000016241	PYM1	84	93.514	ENSMPUG00000000931	PYM1	91	94.022	Mustela_putorius_furo
ENSUMAG00000016241	PYM1	85	88.298	ENSMLUG00000003586	PYM1	93	88.298	Myotis_lucifugus
ENSUMAG00000016241	PYM1	83	87.978	ENSNGAG00000019207	Pym1	88	88.462	Nannospalax_galili
ENSUMAG00000016241	PYM1	85	57.000	ENSNBRG00000006951	pym1	89	58.421	Neolamprologus_brichardi
ENSUMAG00000016241	PYM1	82	95.028	ENSNLEG00000017588	PYM1	94	91.146	Nomascus_leucogenys
ENSUMAG00000016241	PYM1	80	79.096	ENSMEUG00000001017	PYM1	93	79.096	Notamacropus_eugenii
ENSUMAG00000016241	PYM1	81	89.385	ENSOPRG00000007797	PYM1	94	85.938	Ochotona_princeps
ENSUMAG00000016241	PYM1	84	88.108	ENSODEG00000004289	PYM1	91	88.108	Octodon_degus
ENSUMAG00000016241	PYM1	80	56.021	ENSONIG00000016740	pym1	89	57.513	Oreochromis_niloticus
ENSUMAG00000016241	PYM1	93	83.010	ENSOCUG00000025969	PYM1	92	83.010	Oryctolagus_cuniculus
ENSUMAG00000016241	PYM1	89	56.098	ENSORLG00000030592	pym1	91	56.250	Oryzias_latipes
ENSUMAG00000016241	PYM1	86	57.286	ENSORLG00020011264	pym1	91	56.186	Oryzias_latipes_hni
ENSUMAG00000016241	PYM1	89	56.863	ENSORLG00015005287	pym1	91	57.068	Oryzias_latipes_hsok
ENSUMAG00000016241	PYM1	89	56.931	ENSOMEG00000022250	pym1	91	56.842	Oryzias_melastigma
ENSUMAG00000016241	PYM1	81	93.296	ENSOGAG00000007038	PYM1	88	93.333	Otolemur_garnettii
ENSUMAG00000016241	PYM1	85	89.840	ENSOARG00000010856	PYM1	91	90.323	Ovis_aries
ENSUMAG00000016241	PYM1	82	95.028	ENSPPAG00000043630	PYM1	94	91.667	Pan_paniscus
ENSUMAG00000016241	PYM1	84	91.351	ENSPPRG00000013243	PYM1	94	91.667	Panthera_pardus
ENSUMAG00000016241	PYM1	84	90.811	ENSPTIG00000017380	PYM1	94	91.146	Panthera_tigris_altaica
ENSUMAG00000016241	PYM1	84	92.973	ENSPTRG00000005067	PYM1	94	91.667	Pan_troglodytes
ENSUMAG00000016241	PYM1	87	89.119	ENSPANG00000009562	PYM1	94	90.576	Papio_anubis
ENSUMAG00000016241	PYM1	86	59.500	ENSPKIG00000006301	pym1	88	59.358	Paramormyrops_kingsleyae
ENSUMAG00000016241	PYM1	81	63.021	ENSPSIG00000003043	PYM1	90	63.402	Pelodiscus_sinensis
ENSUMAG00000016241	PYM1	90	56.311	ENSPMGG00000023161	pym1	91	57.068	Periophthalmus_magnuspinnatus
ENSUMAG00000016241	PYM1	86	84.127	ENSPEMG00000009372	Pym1	93	85.714	Peromyscus_maniculatus_bairdii
ENSUMAG00000016241	PYM1	80	80.791	ENSPCIG00000024658	PYM1	89	79.348	Phascolarctos_cinereus
ENSUMAG00000016241	PYM1	88	58.537	ENSPFOG00000008193	pym1	90	58.549	Poecilia_formosa
ENSUMAG00000016241	PYM1	85	58.794	ENSPLAG00000009228	pym1	89	58.730	Poecilia_latipinna
ENSUMAG00000016241	PYM1	85	58.794	ENSPMEG00000001505	pym1	89	58.730	Poecilia_mexicana
ENSUMAG00000016241	PYM1	81	94.413	ENSPPYG00000004635	PYM1	92	94.972	Pongo_abelii
ENSUMAG00000016241	PYM1	84	91.351	ENSPCOG00000019706	PYM1	94	91.304	Propithecus_coquereli
ENSUMAG00000016241	PYM1	81	95.531	ENSPVAG00000011437	PYM1	93	94.536	Pteropus_vampyrus
ENSUMAG00000016241	PYM1	80	58.289	ENSPNYG00000012871	pym1	89	58.201	Pundamilia_nyererei
ENSUMAG00000016241	PYM1	89	54.673	ENSPNAG00000018833	pym1	91	55.941	Pygocentrus_nattereri
ENSUMAG00000016241	PYM1	82	65.574	ENSRNOG00000049415	AABR07055413.1	91	65.054	Rattus_norvegicus
ENSUMAG00000016241	PYM1	81	88.268	ENSRNOG00000058130	Pym1	94	85.938	Rattus_norvegicus
ENSUMAG00000016241	PYM1	84	87.027	ENSRBIG00000033362	PYM1	94	84.896	Rhinopithecus_bieti
ENSUMAG00000016241	PYM1	82	93.923	ENSRROG00000043620	PYM1	94	91.099	Rhinopithecus_roxellana
ENSUMAG00000016241	PYM1	84	92.432	ENSSBOG00000029393	PYM1	94	90.625	Saimiri_boliviensis_boliviensis
ENSUMAG00000016241	PYM1	83	77.596	ENSSHAG00000008280	PYM1	90	77.596	Sarcophilus_harrisii
ENSUMAG00000016241	PYM1	83	58.947	ENSSFOG00015021475	pym1	91	58.947	Scleropages_formosus
ENSUMAG00000016241	PYM1	88	55.610	ENSSMAG00000020912	pym1	90	58.031	Scophthalmus_maximus
ENSUMAG00000016241	PYM1	85	53.695	ENSSDUG00000001807	pym1	89	56.633	Seriola_dumerili
ENSUMAG00000016241	PYM1	85	56.995	ENSSLDG00000013730	pym1	88	59.140	Seriola_lalandi_dorsalis
ENSUMAG00000016241	PYM1	81	88.827	ENSSARG00000009569	PYM1	94	88.889	Sorex_araneus
ENSUMAG00000016241	PYM1	81	65.079	ENSSPUG00000015059	PYM1	91	64.062	Sphenodon_punctatus
ENSUMAG00000016241	PYM1	85	55.941	ENSSPAG00000020100	pym1	88	56.842	Stegastes_partitus
ENSUMAG00000016241	PYM1	84	90.270	ENSSSCG00000040825	PYM1	91	90.761	Sus_scrofa
ENSUMAG00000016241	PYM1	85	56.345	ENSTRUG00000021367	pym1	89	57.527	Takifugu_rubripes
ENSUMAG00000016241	PYM1	86	52.404	ENSTNIG00000012534	pym1	88	55.191	Tetraodon_nigroviridis
ENSUMAG00000016241	PYM1	81	86.592	ENSTBEG00000004208	PYM1	94	86.667	Tupaia_belangeri
ENSUMAG00000016241	PYM1	83	91.304	ENSTTRG00000014971	PYM1	94	91.304	Tursiops_truncatus
ENSUMAG00000016241	PYM1	89	97.462	ENSUAMG00000014521	PYM1	95	99.479	Ursus_americanus
ENSUMAG00000016241	PYM1	84	92.432	ENSVVUG00000022749	PYM1	89	94.444	Vulpes_vulpes
ENSUMAG00000016241	PYM1	81	59.459	ENSXETG00000021850	pym1	92	58.763	Xenopus_tropicalis
ENSUMAG00000016241	PYM1	85	58.794	ENSXMAG00000011649	pym1	89	58.730	Xiphophorus_maculatus