EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000016389 (Gene tree)
Gene ID: 103672411
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 33185 bases
Position: chrKK498660.1:672547-705731
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000022428	EST1	PF10374.9	7.6e-25	1	1
ENSUMAP00000022421	EST1	PF10374.9	8.1e-25	1	1
ENSUMAP00000022428	EST1_DNA_bind	PF10373.9	1.8e-55	1	1
ENSUMAP00000022421	EST1_DNA_bind	PF10373.9	2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000026575	SMG7-202	3231	-	ENSUMAP00000022428	1048 (aa)	-	-
ENSUMAT00000026565	SMG7-201	3381	-	ENSUMAP00000022421	1098 (aa)	-	-

Gene Model

Click here to download ENSUMAG00000016389's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000016389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000016389	SMG7	100	97.426	ENSG00000116698	SMG7	100	97.487	Homo_sapiens
ENSUMAG00000016389	SMG7	89	70.394	ENSAPOG00000009611	smg7	92	71.019	Acanthochromis_polyacanthus
ENSUMAG00000016389	SMG7	100	95.542	ENSAMEG00000002357	SMG7	100	95.542	Ailuropoda_melanoleuca
ENSUMAG00000016389	SMG7	100	63.309	ENSACIG00000015152	smg7	99	63.579	Amphilophus_citrinellus
ENSUMAG00000016389	SMG7	100	63.466	ENSAOCG00000013538	smg7	97	64.122	Amphiprion_ocellaris
ENSUMAG00000016389	SMG7	100	63.328	ENSAPEG00000007851	smg7	97	63.983	Amphiprion_percula
ENSUMAG00000016389	SMG7	100	62.986	ENSATEG00000006931	smg7	96	63.218	Anabas_testudineus
ENSUMAG00000016389	SMG7	100	85.559	ENSAPLG00000015811	SMG7	96	85.468	Anas_platyrhynchos
ENSUMAG00000016389	SMG7	100	84.762	ENSACAG00000014989	SMG7	96	84.762	Anolis_carolinensis
ENSUMAG00000016389	SMG7	97	97.081	ENSANAG00000028114	SMG7	96	93.275	Aotus_nancymaae
ENSUMAG00000016389	SMG7	100	64.114	ENSACLG00000022079	smg7	97	63.706	Astatotilapia_calliptera
ENSUMAG00000016389	SMG7	100	66.580	ENSAMXG00000020809	smg7	97	66.868	Astyanax_mexicanus
ENSUMAG00000016389	SMG7	100	96.997	ENSBTAG00000008003	SMG7	94	96.997	Bos_taurus
ENSUMAG00000016389	SMG7	100	97.088	ENSCJAG00000005135	SMG7	94	97.088	Callithrix_jacchus
ENSUMAG00000016389	SMG7	100	98.816	ENSCAFG00000013276	SMG7	94	98.816	Canis_familiaris
ENSUMAG00000016389	SMG7	100	98.816	ENSCAFG00020015475	SMG7	94	98.816	Canis_lupus_dingo
ENSUMAG00000016389	SMG7	100	96.997	ENSCHIG00000018192	SMG7	96	96.997	Capra_hircus
ENSUMAG00000016389	SMG7	100	96.633	ENSTSYG00000002667	SMG7	100	92.751	Carlito_syrichta
ENSUMAG00000016389	SMG7	100	97.177	ENSCPOG00000008906	SMG7	97	97.177	Cavia_porcellus
ENSUMAG00000016389	SMG7	100	93.537	ENSCCAG00000028596	SMG7	100	93.537	Cebus_capucinus
ENSUMAG00000016389	SMG7	100	97.543	ENSCATG00000011063	SMG7	100	93.624	Cercocebus_atys
ENSUMAG00000016389	SMG7	100	96.633	ENSCLAG00000010751	SMG7	96	96.633	Chinchilla_lanigera
ENSUMAG00000016389	SMG7	100	97.361	ENSCSAG00000012654	SMG7	94	97.361	Chlorocebus_sabaeus
ENSUMAG00000016389	SMG7	95	87.966	ENSCHOG00000010522	SMG7	93	88.443	Choloepus_hoffmanni
ENSUMAG00000016389	SMG7	100	88.240	ENSCPBG00000015724	SMG7	96	87.892	Chrysemys_picta_bellii
ENSUMAG00000016389	SMG7	100	93.537	ENSCANG00000015680	SMG7	100	93.537	Colobus_angolensis_palliatus
ENSUMAG00000016389	SMG7	100	95.632	ENSCGRG00001013705	Smg7	96	95.450	Cricetulus_griseus_chok1gshd
ENSUMAG00000016389	SMG7	100	95.632	ENSCGRG00000018401	Smg7	96	95.450	Cricetulus_griseus_crigri
ENSUMAG00000016389	SMG7	97	68.500	ENSCVAG00000011842	smg7	98	68.000	Cyprinodon_variegatus
ENSUMAG00000016389	SMG7	100	65.751	ENSDARG00000060767	smg7	97	64.576	Danio_rerio
ENSUMAG00000016389	SMG7	100	96.269	ENSDORG00000007331	Smg7	96	96.269	Dipodomys_ordii
ENSUMAG00000016389	SMG7	97	94.915	ENSETEG00000002654	SMG7	96	95.009	Echinops_telfairi
ENSUMAG00000016389	SMG7	100	98.271	ENSEASG00005006524	SMG7	96	98.271	Equus_asinus_asinus
ENSUMAG00000016389	SMG7	100	98.379	ENSECAG00000004313	SMG7	99	98.335	Equus_caballus
ENSUMAG00000016389	SMG7	97	97.366	ENSEEUG00000002024	SMG7	91	97.366	Erinaceus_europaeus
ENSUMAG00000016389	SMG7	100	65.634	ENSELUG00000010293	smg7	97	64.936	Esox_lucius
ENSUMAG00000016389	SMG7	100	98.569	ENSFCAG00000010900	SMG7	99	98.544	Felis_catus
ENSUMAG00000016389	SMG7	100	82.726	ENSFALG00000003047	SMG7	98	82.726	Ficedula_albicollis
ENSUMAG00000016389	SMG7	100	96.724	ENSFDAG00000012121	SMG7	97	96.724	Fukomys_damarensis
ENSUMAG00000016389	SMG7	100	61.566	ENSFHEG00000011073	smg7	96	61.956	Fundulus_heteroclitus
ENSUMAG00000016389	SMG7	97	55.974	ENSGMOG00000004916	smg7	88	66.821	Gadus_morhua
ENSUMAG00000016389	SMG7	100	85.572	ENSGALG00000004667	SMG7	96	85.481	Gallus_gallus
ENSUMAG00000016389	SMG7	100	61.786	ENSGAFG00000019000	smg7	96	61.773	Gambusia_affinis
ENSUMAG00000016389	SMG7	97	64.286	ENSGACG00000001634	smg7	96	64.022	Gasterosteus_aculeatus
ENSUMAG00000016389	SMG7	100	97.361	ENSGGOG00000002342	SMG7	100	93.450	Gorilla_gorilla
ENSUMAG00000016389	SMG7	100	64.109	ENSHBUG00000003726	smg7	94	72.081	Haplochromis_burtoni
ENSUMAG00000016389	SMG7	100	96.997	ENSHGLG00000009353	SMG7	98	96.997	Heterocephalus_glaber_female
ENSUMAG00000016389	SMG7	100	88.899	ENSHGLG00100004878	-	96	88.717	Heterocephalus_glaber_male
ENSUMAG00000016389	SMG7	100	95.268	ENSHGLG00100009637	-	98	95.268	Heterocephalus_glaber_male
ENSUMAG00000016389	SMG7	100	66.464	ENSIPUG00000016997	smg7	97	65.909	Ictalurus_punctatus
ENSUMAG00000016389	SMG7	100	97.807	ENSSTOG00000000401	SMG7	96	97.807	Ictidomys_tridecemlineatus
ENSUMAG00000016389	SMG7	100	94.359	ENSJJAG00000012351	Smg7	96	94.449	Jaculus_jaculus
ENSUMAG00000016389	SMG7	100	59.982	ENSKMAG00000004900	smg7	96	70.000	Kryptolebias_marmoratus
ENSUMAG00000016389	SMG7	100	64.318	ENSLBEG00000002983	smg7	96	64.050	Labrus_bergylta
ENSUMAG00000016389	SMG7	52	64.623	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSUMAG00000016389	SMG7	100	75.850	ENSLACG00000000972	SMG7	96	75.760	Latimeria_chalumnae
ENSUMAG00000016389	SMG7	100	67.068	ENSLOCG00000002010	smg7	96	66.495	Lepisosteus_oculatus
ENSUMAG00000016389	SMG7	100	96.997	ENSLAFG00000008186	SMG7	96	96.997	Loxodonta_africana
ENSUMAG00000016389	SMG7	100	97.712	ENSMFAG00000031653	SMG7	100	93.712	Macaca_fascicularis
ENSUMAG00000016389	SMG7	100	97.543	ENSMMUG00000018458	SMG7	94	97.543	Macaca_mulatta
ENSUMAG00000016389	SMG7	100	93.624	ENSMNEG00000034798	SMG7	100	93.624	Macaca_nemestrina
ENSUMAG00000016389	SMG7	100	97.543	ENSMLEG00000037170	SMG7	100	93.624	Mandrillus_leucophaeus
ENSUMAG00000016389	SMG7	88	62.344	ENSMAMG00000018733	smg7	81	64.407	Mastacembelus_armatus
ENSUMAG00000016389	SMG7	100	63.976	ENSMZEG00005015247	smg7	97	63.706	Maylandia_zebra
ENSUMAG00000016389	SMG7	98	85.093	ENSMGAG00000001561	SMG7	95	85.000	Meleagris_gallopavo
ENSUMAG00000016389	SMG7	100	96.087	ENSMAUG00000019484	Smg7	97	95.905	Mesocricetus_auratus
ENSUMAG00000016389	SMG7	100	97.723	ENSMICG00000007145	SMG7	96	97.723	Microcebus_murinus
ENSUMAG00000016389	SMG7	100	95.905	ENSMOCG00000020748	Smg7	96	95.723	Microtus_ochrogaster
ENSUMAG00000016389	SMG7	100	61.538	ENSMMOG00000001524	smg7	96	61.918	Mola_mola
ENSUMAG00000016389	SMG7	92	88.812	ENSMODG00000007139	SMG7	96	88.911	Monodelphis_domestica
ENSUMAG00000016389	SMG7	97	69.154	ENSMALG00000000061	smg7	90	69.154	Monopterus_albus
ENSUMAG00000016389	SMG7	100	95.723	MGP_CAROLIEiJ_G0014704	Smg7	96	95.177	Mus_caroli
ENSUMAG00000016389	SMG7	100	95.632	ENSMUSG00000042772	Smg7	96	95.450	Mus_musculus
ENSUMAG00000016389	SMG7	100	95.632	MGP_PahariEiJ_G0027940	Smg7	96	95.450	Mus_pahari
ENSUMAG00000016389	SMG7	100	95.723	MGP_SPRETEiJ_G0015511	Smg7	96	95.541	Mus_spretus
ENSUMAG00000016389	SMG7	100	99.089	ENSMPUG00000011732	SMG7	95	99.089	Mustela_putorius_furo
ENSUMAG00000016389	SMG7	100	97.361	ENSMLUG00000015417	SMG7	96	97.361	Myotis_lucifugus
ENSUMAG00000016389	SMG7	100	96.084	ENSNGAG00000009836	Smg7	97	96.084	Nannospalax_galili
ENSUMAG00000016389	SMG7	100	59.946	ENSNBRG00000024343	smg7	96	69.668	Neolamprologus_brichardi
ENSUMAG00000016389	SMG7	100	97.634	ENSNLEG00000018018	SMG7	100	93.712	Nomascus_leucogenys
ENSUMAG00000016389	SMG7	77	84.724	ENSMEUG00000004681	SMG7	74	85.077	Notamacropus_eugenii
ENSUMAG00000016389	SMG7	97	84.920	ENSOPRG00000013942	SMG7	93	84.920	Ochotona_princeps
ENSUMAG00000016389	SMG7	100	96.542	ENSODEG00000010390	SMG7	96	96.542	Octodon_degus
ENSUMAG00000016389	SMG7	100	63.709	ENSONIG00000000277	smg7	96	63.289	Oreochromis_niloticus
ENSUMAG00000016389	SMG7	100	90.670	ENSOANG00000000994	SMG7	98	90.761	Ornithorhynchus_anatinus
ENSUMAG00000016389	SMG7	100	89.900	ENSOCUG00000005887	SMG7	90	90.082	Oryctolagus_cuniculus
ENSUMAG00000016389	SMG7	100	61.843	ENSORLG00000007314	smg7	96	62.360	Oryzias_latipes
ENSUMAG00000016389	SMG7	100	62.188	ENSORLG00020015779	smg7	96	62.705	Oryzias_latipes_hni
ENSUMAG00000016389	SMG7	100	63.830	ENSORLG00015012289	smg7	96	62.318	Oryzias_latipes_hsok
ENSUMAG00000016389	SMG7	100	62.060	ENSOMEG00000002328	smg7	96	62.436	Oryzias_melastigma
ENSUMAG00000016389	SMG7	97	96.795	ENSOGAG00000003107	SMG7	90	96.324	Otolemur_garnettii
ENSUMAG00000016389	SMG7	100	96.815	ENSOARG00000001352	SMG7	98	96.759	Ovis_aries
ENSUMAG00000016389	SMG7	100	93.624	ENSPPAG00000031619	SMG7	100	93.624	Pan_paniscus
ENSUMAG00000016389	SMG7	100	98.725	ENSPPRG00000011222	SMG7	94	98.725	Panthera_pardus
ENSUMAG00000016389	SMG7	97	98.775	ENSPTIG00000007242	SMG7	100	94.755	Panthera_tigris_altaica
ENSUMAG00000016389	SMG7	97	97.458	ENSPTRG00000001764	SMG7	100	93.624	Pan_troglodytes
ENSUMAG00000016389	SMG7	100	97.543	ENSPANG00000004520	SMG7	94	97.543	Papio_anubis
ENSUMAG00000016389	SMG7	100	63.510	ENSPKIG00000007242	smg7	96	68.500	Paramormyrops_kingsleyae
ENSUMAG00000016389	SMG7	100	90.727	ENSPSIG00000012201	SMG7	96	90.091	Pelodiscus_sinensis
ENSUMAG00000016389	SMG7	73	41.044	ENSPMGG00000021833	smg7	89	57.500	Periophthalmus_magnuspinnatus
ENSUMAG00000016389	SMG7	100	94.995	ENSPEMG00000011315	Smg7	96	94.813	Peromyscus_maniculatus_bairdii
ENSUMAG00000016389	SMG7	100	88.918	ENSPCIG00000003786	SMG7	96	90.909	Phascolarctos_cinereus
ENSUMAG00000016389	SMG7	100	61.387	ENSPFOG00000019219	smg7	97	61.387	Poecilia_formosa
ENSUMAG00000016389	SMG7	100	61.628	ENSPLAG00000001446	smg7	96	61.538	Poecilia_latipinna
ENSUMAG00000016389	SMG7	96	60.777	ENSPMEG00000005218	smg7	96	60.685	Poecilia_mexicana
ENSUMAG00000016389	SMG7	87	59.055	ENSPREG00000019039	smg7	90	58.325	Poecilia_reticulata
ENSUMAG00000016389	SMG7	100	93.607	ENSPPYG00000000427	SMG7	96	93.607	Pongo_abelii
ENSUMAG00000016389	SMG7	97	85.136	ENSPCAG00000008360	SMG7	92	84.948	Procavia_capensis
ENSUMAG00000016389	SMG7	100	97.805	ENSPCOG00000011996	SMG7	96	97.805	Propithecus_coquereli
ENSUMAG00000016389	SMG7	92	92.056	ENSPVAG00000000851	SMG7	86	92.056	Pteropus_vampyrus
ENSUMAG00000016389	SMG7	100	63.962	ENSPNYG00000007643	smg7	97	63.473	Pundamilia_nyererei
ENSUMAG00000016389	SMG7	100	65.835	ENSPNAG00000011374	smg7	95	69.192	Pygocentrus_nattereri
ENSUMAG00000016389	SMG7	100	95.273	ENSRNOG00000027962	Smg7	100	96.429	Rattus_norvegicus
ENSUMAG00000016389	SMG7	100	97.452	ENSRBIG00000036316	SMG7	100	93.537	Rhinopithecus_bieti
ENSUMAG00000016389	SMG7	100	97.452	ENSRROG00000035719	SMG7	100	93.537	Rhinopithecus_roxellana
ENSUMAG00000016389	SMG7	100	97.426	ENSSBOG00000023454	SMG7	100	93.450	Saimiri_boliviensis_boliviensis
ENSUMAG00000016389	SMG7	100	88.595	ENSSHAG00000013147	SMG7	96	88.332	Sarcophilus_harrisii
ENSUMAG00000016389	SMG7	92	77.368	ENSSFOG00015017252	smg7	96	77.368	Scleropages_formosus
ENSUMAG00000016389	SMG7	100	64.151	ENSSMAG00000006067	smg7	99	63.432	Scophthalmus_maximus
ENSUMAG00000016389	SMG7	100	62.742	ENSSDUG00000017543	smg7	96	63.158	Seriola_dumerili
ENSUMAG00000016389	SMG7	100	85.623	ENSSPUG00000002064	SMG7	96	85.532	Sphenodon_punctatus
ENSUMAG00000016389	SMG7	100	65.202	ENSSPAG00000008733	smg7	96	64.690	Stegastes_partitus
ENSUMAG00000016389	SMG7	100	98.093	ENSSSCG00000015558	SMG7	96	98.093	Sus_scrofa
ENSUMAG00000016389	SMG7	100	85.662	ENSTGUG00000003928	SMG7	97	85.662	Taeniopygia_guttata
ENSUMAG00000016389	SMG7	100	63.400	ENSTNIG00000002802	smg7	96	62.924	Tetraodon_nigroviridis
ENSUMAG00000016389	SMG7	77	95.339	ENSTBEG00000003220	SMG7	72	95.339	Tupaia_belangeri
ENSUMAG00000016389	SMG7	97	97.646	ENSTTRG00000014778	SMG7	91	97.646	Tursiops_truncatus
ENSUMAG00000016389	SMG7	100	100.000	ENSUAMG00000017473	SMG7	100	100.000	Ursus_americanus
ENSUMAG00000016389	SMG7	100	99.046	ENSVVUG00000008976	SMG7	96	99.046	Vulpes_vulpes
ENSUMAG00000016389	SMG7	100	68.817	ENSXETG00000012528	smg7	96	69.037	Xenopus_tropicalis
ENSUMAG00000016389	SMG7	100	62.032	ENSXMAG00000007123	smg7	96	62.121	Xiphophorus_maculatus