EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUMAG00000016401 (Gene tree)
Gene ID: 103661439
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 81277 bases
Position: chrKK498578.1:14600421-14681697
Accession: 103661439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000022456	ResIII	PF04851.15	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000026610	-	2736	-	ENSUMAP00000022456	911 (aa)	XP_008687370	UPI0004E015D7

Gene Model

Click here to download ENSUMAG00000016401's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000016401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUMAG00000016401	-	55	34.638	ENSUMAG00000004073	SMARCA1	67	31.410
ENSUMAG00000016401	-	52	36.232	ENSUMAG00000004748	HELLS	64	35.749
ENSUMAG00000016401	-	56	30.224	ENSUMAG00000009733	CHD1L	54	30.682
ENSUMAG00000016401	-	77	41.494	ENSUMAG00000023603	RAD54L	92	40.664

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000016401	-	80	91.034	ENSG00000265817	FSBP	99	91.034	Homo_sapiens
ENSUMAG00000016401	-	99	87.912	ENSG00000197275	RAD54B	99	87.912	Homo_sapiens
ENSUMAG00000016401	-	100	98.353	ENSAMEG00000005834	-	100	98.353	Ailuropoda_melanoleuca
ENSUMAG00000016401	-	99	54.723	ENSACIG00000013005	rad54b	99	54.723	Amphilophus_citrinellus
ENSUMAG00000016401	-	99	55.579	ENSAOCG00000008523	rad54b	99	55.579	Amphiprion_ocellaris
ENSUMAG00000016401	-	99	55.266	ENSAPEG00000001673	rad54b	99	55.375	Amphiprion_percula
ENSUMAG00000016401	-	99	54.208	ENSATEG00000001527	rad54b	99	54.208	Anabas_testudineus
ENSUMAG00000016401	-	99	68.962	ENSAPLG00000014366	-	99	68.962	Anas_platyrhynchos
ENSUMAG00000016401	-	87	71.843	ENSACAG00000003671	-	99	71.843	Anolis_carolinensis
ENSUMAG00000016401	-	71	88.426	ENSANAG00000019528	-	99	88.426	Aotus_nancymaae
ENSUMAG00000016401	-	99	54.417	ENSACLG00000007826	rad54b	92	59.824	Astatotilapia_calliptera
ENSUMAG00000016401	-	85	58.015	ENSAMXG00000039985	rad54b	94	57.881	Astyanax_mexicanus
ENSUMAG00000016401	-	100	87.706	ENSBTAG00000000632	RAD54B	100	87.706	Bos_taurus
ENSUMAG00000016401	-	80	35.020	WBGene00013792	Y116A8C.13	84	35.224	Caenorhabditis_elegans
ENSUMAG00000016401	-	99	85.840	ENSCJAG00000000080	-	99	88.828	Callithrix_jacchus
ENSUMAG00000016401	-	100	92.975	ENSCAFG00000009179	RAD54B	99	92.975	Canis_familiaris
ENSUMAG00000016401	-	100	93.085	ENSCAFG00020012084	-	99	93.085	Canis_lupus_dingo
ENSUMAG00000016401	-	100	87.267	ENSCHIG00000008230	-	100	87.267	Capra_hircus
ENSUMAG00000016401	-	100	85.730	ENSTSYG00000013234	-	100	85.730	Carlito_syrichta
ENSUMAG00000016401	-	100	82.656	ENSCPOG00000011643	-	99	82.656	Cavia_porcellus
ENSUMAG00000016401	-	99	85.730	ENSCCAG00000011754	-	99	88.828	Cebus_capucinus
ENSUMAG00000016401	-	99	86.813	ENSCATG00000030661	-	99	90.207	Cercocebus_atys
ENSUMAG00000016401	-	99	83.516	ENSCLAG00000010476	-	99	83.516	Chinchilla_lanigera
ENSUMAG00000016401	-	99	86.813	ENSCSAG00000012712	-	99	86.813	Chlorocebus_sabaeus
ENSUMAG00000016401	-	99	69.499	ENSCPBG00000003204	-	99	69.976	Chrysemys_picta_bellii
ENSUMAG00000016401	-	99	87.143	ENSCANG00000017939	-	99	90.345	Colobus_angolensis_palliatus
ENSUMAG00000016401	-	100	78.532	ENSCGRG00001020184	Rad54b	100	78.532	Cricetulus_griseus_chok1gshd
ENSUMAG00000016401	-	100	77.327	ENSCGRG00000016752	Rad54b	100	77.327	Cricetulus_griseus_crigri
ENSUMAG00000016401	-	86	58.386	ENSCSEG00000001601	rad54b	93	58.386	Cynoglossus_semilaevis
ENSUMAG00000016401	-	99	57.096	ENSCVAG00000009200	rad54b	99	57.096	Cyprinodon_variegatus
ENSUMAG00000016401	-	100	53.706	ENSDARG00000092134	rad54b	100	60.429	Danio_rerio
ENSUMAG00000016401	-	99	84.464	ENSDNOG00000015535	-	99	84.464	Dasypus_novemcinctus
ENSUMAG00000016401	-	100	82.785	ENSDORG00000002492	Rad54b	100	82.785	Dipodomys_ordii
ENSUMAG00000016401	-	87	81.266	ENSETEG00000010605	-	100	81.266	Echinops_telfairi
ENSUMAG00000016401	-	99	47.430	ENSEBUG00000009104	rad54b	98	47.228	Eptatretus_burgeri
ENSUMAG00000016401	-	97	88.249	ENSEASG00005004021	-	100	88.249	Equus_asinus_asinus
ENSUMAG00000016401	-	100	88.596	ENSECAG00000021949	-	99	88.596	Equus_caballus
ENSUMAG00000016401	-	83	84.472	ENSEEUG00000008056	-	83	84.472	Erinaceus_europaeus
ENSUMAG00000016401	-	99	53.919	ENSELUG00000009287	rad54b	99	53.919	Esox_lucius
ENSUMAG00000016401	-	100	93.963	ENSFCAG00000015513	-	100	95.041	Felis_catus
ENSUMAG00000016401	-	99	68.221	ENSFALG00000005467	-	99	68.221	Ficedula_albicollis
ENSUMAG00000016401	-	99	84.396	ENSFDAG00000020541	-	100	84.396	Fukomys_damarensis
ENSUMAG00000016401	-	89	57.491	ENSFHEG00000014382	rad54b	90	57.491	Fundulus_heteroclitus
ENSUMAG00000016401	-	86	56.663	ENSGMOG00000014774	rad54b	98	56.663	Gadus_morhua
ENSUMAG00000016401	-	99	67.612	ENSGALG00000043597	RAD54B	99	67.612	Gallus_gallus
ENSUMAG00000016401	-	99	56.004	ENSGAFG00000007901	rad54b	99	56.004	Gambusia_affinis
ENSUMAG00000016401	-	99	55.508	ENSGACG00000009128	rad54b	99	55.508	Gasterosteus_aculeatus
ENSUMAG00000016401	-	99	69.399	ENSGAGG00000018747	-	99	69.399	Gopherus_agassizii
ENSUMAG00000016401	-	100	87.596	ENSGGOG00000023516	-	100	87.596	Gorilla_gorilla
ENSUMAG00000016401	-	99	54.516	ENSHBUG00000016017	rad54b	99	54.516	Haplochromis_burtoni
ENSUMAG00000016401	-	100	83.769	ENSHGLG00000008263	RAD54B	99	83.769	Heterocephalus_glaber_female
ENSUMAG00000016401	-	100	83.009	ENSHGLG00100008108	-	99	83.009	Heterocephalus_glaber_male
ENSUMAG00000016401	-	99	52.922	ENSHCOG00000004764	rad54b	99	54.819	Hippocampus_comes
ENSUMAG00000016401	-	100	52.637	ENSIPUG00000018531	rad54b	99	52.637	Ictalurus_punctatus
ENSUMAG00000016401	-	99	83.554	ENSSTOG00000010791	-	99	83.554	Ictidomys_tridecemlineatus
ENSUMAG00000016401	-	100	81.360	ENSJJAG00000010314	Rad54b	100	81.360	Jaculus_jaculus
ENSUMAG00000016401	-	99	54.148	ENSKMAG00000004744	rad54b	99	54.148	Kryptolebias_marmoratus
ENSUMAG00000016401	-	82	69.251	ENSLACG00000000859	-	100	69.251	Latimeria_chalumnae
ENSUMAG00000016401	-	99	57.569	ENSLOCG00000010100	rad54b	94	63.648	Lepisosteus_oculatus
ENSUMAG00000016401	-	89	85.785	ENSLAFG00000015315	-	100	85.785	Loxodonta_africana
ENSUMAG00000016401	-	99	86.703	ENSMFAG00000031629	-	99	89.931	Macaca_fascicularis
ENSUMAG00000016401	-	99	86.703	ENSMMUG00000005659	-	99	86.703	Macaca_mulatta
ENSUMAG00000016401	-	99	86.703	ENSMNEG00000016408	-	99	86.703	Macaca_nemestrina
ENSUMAG00000016401	-	99	86.923	ENSMLEG00000006946	-	99	86.923	Mandrillus_leucophaeus
ENSUMAG00000016401	-	99	55.157	ENSMAMG00000012269	rad54b	99	55.157	Mastacembelus_armatus
ENSUMAG00000016401	-	99	54.516	ENSMZEG00005005281	rad54b	95	59.698	Maylandia_zebra
ENSUMAG00000016401	-	99	67.865	ENSMGAG00000012024	-	99	67.865	Meleagris_gallopavo
ENSUMAG00000016401	-	100	77.875	ENSMAUG00000013586	Rad54b	100	77.875	Mesocricetus_auratus
ENSUMAG00000016401	-	99	83.297	ENSMICG00000000754	-	99	83.297	Microcebus_murinus
ENSUMAG00000016401	-	100	76.805	ENSMOCG00000020035	Rad54b	99	76.805	Microtus_ochrogaster
ENSUMAG00000016401	-	99	53.871	ENSMMOG00000003394	rad54b	99	53.871	Mola_mola
ENSUMAG00000016401	-	88	77.114	ENSMODG00000007343	-	99	77.114	Monodelphis_domestica
ENSUMAG00000016401	-	71	59.845	ENSMALG00000001520	rad54b	99	59.752	Monopterus_albus
ENSUMAG00000016401	-	100	78.642	MGP_CAROLIEiJ_G0025810	Rad54b	100	78.642	Mus_caroli
ENSUMAG00000016401	-	100	78.180	ENSMUSG00000078773	Rad54b	100	78.180	Mus_musculus
ENSUMAG00000016401	-	100	78.751	MGP_PahariEiJ_G0023933	Rad54b	100	78.751	Mus_pahari
ENSUMAG00000016401	-	100	78.728	MGP_SPRETEiJ_G0026758	Rad54b	100	78.728	Mus_spretus
ENSUMAG00000016401	-	89	94.815	ENSMPUG00000008878	-	100	94.815	Mustela_putorius_furo
ENSUMAG00000016401	-	99	85.965	ENSMLUG00000008953	-	99	85.965	Myotis_lucifugus
ENSUMAG00000016401	-	100	82.026	ENSNGAG00000017537	Rad54b	100	82.026	Nannospalax_galili
ENSUMAG00000016401	-	99	54.635	ENSNBRG00000013394	rad54b	99	54.635	Neolamprologus_brichardi
ENSUMAG00000016401	-	99	87.692	ENSNLEG00000003062	-	99	90.897	Nomascus_leucogenys
ENSUMAG00000016401	-	82	74.180	ENSMEUG00000012426	-	82	74.180	Notamacropus_eugenii
ENSUMAG00000016401	-	100	82.127	ENSODEG00000019564	-	100	82.127	Octodon_degus
ENSUMAG00000016401	-	89	79.234	ENSODEG00000002650	-	96	86.308	Octodon_degus
ENSUMAG00000016401	-	99	54.793	ENSONIG00000006067	rad54b	99	54.951	Oreochromis_niloticus
ENSUMAG00000016401	-	83	76.361	ENSOANG00000011348	-	100	76.361	Ornithorhynchus_anatinus
ENSUMAG00000016401	-	100	83.662	ENSOCUG00000016478	-	99	83.662	Oryctolagus_cuniculus
ENSUMAG00000016401	-	99	55.026	ENSORLG00000008918	rad54b	99	62.906	Oryzias_latipes
ENSUMAG00000016401	-	71	62.906	ENSORLG00020012171	rad54b	99	62.906	Oryzias_latipes_hni
ENSUMAG00000016401	-	99	55.000	ENSORLG00015018536	rad54b	99	55.000	Oryzias_latipes_hsok
ENSUMAG00000016401	-	84	60.516	ENSOMEG00000004345	rad54b	99	60.516	Oryzias_melastigma
ENSUMAG00000016401	-	99	85.071	ENSOGAG00000007854	-	99	85.071	Otolemur_garnettii
ENSUMAG00000016401	-	89	89.545	ENSOARG00000007691	-	100	89.545	Ovis_aries
ENSUMAG00000016401	-	99	86.264	ENSPPAG00000029572	-	99	86.264	Pan_paniscus
ENSUMAG00000016401	-	100	93.853	ENSPPRG00000007571	-	100	95.041	Panthera_pardus
ENSUMAG00000016401	-	80	95.041	ENSPTIG00000012670	-	100	95.041	Panthera_tigris_altaica
ENSUMAG00000016401	-	99	87.692	ENSPTRG00000020427	-	99	90.897	Pan_troglodytes
ENSUMAG00000016401	-	99	87.033	ENSPANG00000019566	-	99	87.033	Papio_anubis
ENSUMAG00000016401	-	99	58.297	ENSPKIG00000014974	rad54b	99	58.297	Paramormyrops_kingsleyae
ENSUMAG00000016401	-	99	67.612	ENSPSIG00000002383	-	97	72.898	Pelodiscus_sinensis
ENSUMAG00000016401	-	100	78.970	ENSPEMG00000012133	Rad54b	100	78.970	Peromyscus_maniculatus_bairdii
ENSUMAG00000016401	-	86	58.427	ENSPMAG00000002916	rad54b	99	58.677	Petromyzon_marinus
ENSUMAG00000016401	-	89	76.914	ENSPCIG00000020151	-	94	77.375	Phascolarctos_cinereus
ENSUMAG00000016401	-	99	55.272	ENSPFOG00000023411	rad54b	99	55.272	Poecilia_formosa
ENSUMAG00000016401	-	99	55.272	ENSPLAG00000010430	rad54b	99	55.272	Poecilia_latipinna
ENSUMAG00000016401	-	99	55.378	ENSPMEG00000016873	rad54b	95	59.803	Poecilia_mexicana
ENSUMAG00000016401	-	99	56.707	ENSPREG00000018443	rad54b	99	56.707	Poecilia_reticulata
ENSUMAG00000016401	-	99	87.473	ENSPPYG00000018750	-	99	87.473	Pongo_abelii
ENSUMAG00000016401	-	99	87.486	ENSPCOG00000026845	-	99	89.655	Propithecus_coquereli
ENSUMAG00000016401	-	87	90.553	ENSPVAG00000000261	-	92	90.553	Pteropus_vampyrus
ENSUMAG00000016401	-	86	59.748	ENSPNYG00000018303	rad54b	96	59.748	Pundamilia_nyererei
ENSUMAG00000016401	-	99	54.104	ENSPNAG00000000295	rad54b	99	54.104	Pygocentrus_nattereri
ENSUMAG00000016401	-	100	75.246	ENSRNOG00000039949	Rad54b	100	75.246	Rattus_norvegicus
ENSUMAG00000016401	-	99	86.374	ENSRBIG00000020419	-	99	86.374	Rhinopithecus_bieti
ENSUMAG00000016401	-	99	86.374	ENSRROG00000039897	-	99	86.374	Rhinopithecus_roxellana
ENSUMAG00000016401	-	83	35.962	YBR073W	RDH54	61	42.045	Saccharomyces_cerevisiae
ENSUMAG00000016401	-	99	85.620	ENSSBOG00000028501	-	99	85.620	Saimiri_boliviensis_boliviensis
ENSUMAG00000016401	-	99	73.165	ENSSHAG00000017038	-	99	73.165	Sarcophilus_harrisii
ENSUMAG00000016401	-	65	64.966	ENSSFOG00015008483	rad54b	91	64.966	Scleropages_formosus
ENSUMAG00000016401	-	99	53.838	ENSSMAG00000018659	rad54b	99	54.167	Scophthalmus_maximus
ENSUMAG00000016401	-	99	54.255	ENSSDUG00000001122	rad54b	98	54.255	Seriola_dumerili
ENSUMAG00000016401	-	99	54.211	ENSSLDG00000013787	rad54b	99	54.211	Seriola_lalandi_dorsalis
ENSUMAG00000016401	-	99	68.018	ENSSPUG00000016497	-	99	68.018	Sphenodon_punctatus
ENSUMAG00000016401	-	99	55.543	ENSSPAG00000012800	rad54b	99	55.543	Stegastes_partitus
ENSUMAG00000016401	-	99	86.374	ENSSSCG00000006101	-	99	90.250	Sus_scrofa
ENSUMAG00000016401	-	99	67.900	ENSTGUG00000011880	-	99	67.900	Taeniopygia_guttata
ENSUMAG00000016401	-	99	53.871	ENSTRUG00000010015	rad54b	99	53.871	Takifugu_rubripes
ENSUMAG00000016401	-	100	84.413	ENSTTRG00000006312	-	100	84.413	Tursiops_truncatus
ENSUMAG00000016401	-	100	86.718	ENSVPAG00000003157	-	100	86.718	Vicugna_pacos
ENSUMAG00000016401	-	99	55.398	ENSXETG00000025924	rad54b	99	59.776	Xenopus_tropicalis
ENSUMAG00000016401	-	99	55.786	ENSXMAG00000013141	rad54b	99	55.786	Xiphophorus_maculatus