EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000016523 (Gene tree)
Gene ID: 103667938
Gene Symbol: BMS1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Minus strand
Length: 45694 bases
Position: chrKK498624.1:28612090-28657783
Accession: 103667938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000022591	AARP2CN	PF08142.12	6.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000026778	BMS1-201	4502	XM_008696225	ENSUMAP00000022591	1279 (aa)	XP_008694447	UPI0004E01623

Gene Model

Click here to download ENSUMAG00000016523's gene model file

Pathways

Pathway ID	Pathway Name	Source
umr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000016523's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000016523	BMS1	99	90.484	ENSG00000165733	BMS1	99	90.094	Homo_sapiens
ENSUMAG00000016523	BMS1	71	73.077	ENSAPOG00000002296	bms1	99	60.000	Acanthochromis_polyacanthus
ENSUMAG00000016523	BMS1	99	98.441	ENSAMEG00000016834	BMS1	99	98.441	Ailuropoda_melanoleuca
ENSUMAG00000016523	BMS1	77	80.654	ENSACIG00000002588	bms1	85	78.000	Amphilophus_citrinellus
ENSUMAG00000016523	BMS1	86	68.537	ENSAOCG00000018088	bms1	99	62.109	Amphiprion_ocellaris
ENSUMAG00000016523	BMS1	84	69.936	ENSAPEG00000014673	bms1	99	61.533	Amphiprion_percula
ENSUMAG00000016523	BMS1	89	68.489	ENSATEG00000023465	bms1	53	65.697	Anabas_testudineus
ENSUMAG00000016523	BMS1	95	72.866	ENSAPLG00000003759	BMS1	100	72.661	Anas_platyrhynchos
ENSUMAG00000016523	BMS1	100	70.683	ENSACAG00000004537	-	100	71.308	Anolis_carolinensis
ENSUMAG00000016523	BMS1	99	89.166	ENSANAG00000023432	BMS1	99	88.854	Aotus_nancymaae
ENSUMAG00000016523	BMS1	88	68.452	ENSACLG00000001294	bms1	99	62.034	Astatotilapia_calliptera
ENSUMAG00000016523	BMS1	99	91.115	ENSBTAG00000012878	BMS1	99	91.504	Bos_taurus
ENSUMAG00000016523	BMS1	80	52.657	WBGene00022021	Y61A9LA.10	94	52.471	Caenorhabditis_elegans
ENSUMAG00000016523	BMS1	99	89.478	ENSCJAG00000021705	BMS1	99	89.322	Callithrix_jacchus
ENSUMAG00000016523	BMS1	100	95.105	ENSCAFG00000007114	BMS1	100	95.105	Canis_familiaris
ENSUMAG00000016523	BMS1	100	95.105	ENSCAFG00020025282	BMS1	100	95.105	Canis_lupus_dingo
ENSUMAG00000016523	BMS1	99	90.881	ENSCHIG00000023251	BMS1	99	91.037	Capra_hircus
ENSUMAG00000016523	BMS1	99	81.562	ENSCAPG00000008652	BMS1	99	80.781	Cavia_aperea
ENSUMAG00000016523	BMS1	99	85.469	ENSCPOG00000000502	BMS1	99	84.766	Cavia_porcellus
ENSUMAG00000016523	BMS1	99	74.688	ENSCCAG00000024969	-	99	74.377	Cebus_capucinus
ENSUMAG00000016523	BMS1	90	68.320	ENSCATG00000008695	-	97	68.265	Cercocebus_atys
ENSUMAG00000016523	BMS1	99	90.413	ENSCATG00000030625	-	99	90.335	Cercocebus_atys
ENSUMAG00000016523	BMS1	99	85.938	ENSCLAG00000002446	BMS1	99	85.312	Chinchilla_lanigera
ENSUMAG00000016523	BMS1	99	90.569	ENSCSAG00000011118	BMS1	99	90.647	Chlorocebus_sabaeus
ENSUMAG00000016523	BMS1	99	87.237	ENSCHOG00000011055	BMS1	99	87.947	Choloepus_hoffmanni
ENSUMAG00000016523	BMS1	99	74.557	ENSCPBG00000025581	BMS1	99	72.824	Chrysemys_picta_bellii
ENSUMAG00000016523	BMS1	79	58.937	ENSCING00000003181	-	99	58.937	Ciona_intestinalis
ENSUMAG00000016523	BMS1	67	55.904	ENSCSAVG00000004113	-	88	55.374	Ciona_savignyi
ENSUMAG00000016523	BMS1	99	91.426	ENSCANG00000011609	BMS1	99	90.413	Colobus_angolensis_palliatus
ENSUMAG00000016523	BMS1	99	86.014	ENSCGRG00001019461	Bms1	99	85.548	Cricetulus_griseus_chok1gshd
ENSUMAG00000016523	BMS1	99	86.014	ENSCGRG00000009016	Bms1	99	85.548	Cricetulus_griseus_crigri
ENSUMAG00000016523	BMS1	88	68.078	ENSCSEG00000002469	bms1	50	69.055	Cynoglossus_semilaevis
ENSUMAG00000016523	BMS1	85	69.094	ENSCVAG00000008371	bms1	96	68.062	Cyprinodon_variegatus
ENSUMAG00000016523	BMS1	88	67.244	ENSDARG00000054154	bms1	91	66.406	Danio_rerio
ENSUMAG00000016523	BMS1	99	89.078	ENSDNOG00000015761	BMS1	99	89.372	Dasypus_novemcinctus
ENSUMAG00000016523	BMS1	99	88.175	ENSDORG00000002982	Bms1	99	87.862	Dipodomys_ordii
ENSUMAG00000016523	BMS1	75	60.533	FBgn0036686	CG7728	90	58.680	Drosophila_melanogaster
ENSUMAG00000016523	BMS1	85	83.036	ENSETEG00000009554	BMS1	91	83.036	Echinops_telfairi
ENSUMAG00000016523	BMS1	100	92.350	ENSEASG00005006894	BMS1	100	92.896	Equus_asinus_asinus
ENSUMAG00000016523	BMS1	100	92.194	ENSECAG00000001358	BMS1	100	92.740	Equus_caballus
ENSUMAG00000016523	BMS1	89	67.085	ENSELUG00000001756	bms1	94	68.706	Esox_lucius
ENSUMAG00000016523	BMS1	100	94.946	ENSFCAG00000011220	BMS1	100	94.946	Felis_catus
ENSUMAG00000016523	BMS1	99	71.973	ENSFALG00000006882	BMS1	99	72.040	Ficedula_albicollis
ENSUMAG00000016523	BMS1	99	84.609	ENSFDAG00000001422	BMS1	99	83.438	Fukomys_damarensis
ENSUMAG00000016523	BMS1	85	69.729	ENSFHEG00000003367	bms1	55	66.109	Fundulus_heteroclitus
ENSUMAG00000016523	BMS1	99	62.778	ENSGMOG00000000718	bms1	87	74.510	Gadus_morhua
ENSUMAG00000016523	BMS1	100	73.262	ENSGALG00000002624	BMS1	99	73.547	Gallus_gallus
ENSUMAG00000016523	BMS1	99	59.262	ENSGACG00000015334	bms1	89	66.077	Gasterosteus_aculeatus
ENSUMAG00000016523	BMS1	100	73.791	ENSGAGG00000003467	BMS1	100	73.032	Gopherus_agassizii
ENSUMAG00000016523	BMS1	87	67.836	ENSHBUG00000022628	bms1	99	62.131	Haplochromis_burtoni
ENSUMAG00000016523	BMS1	99	84.688	ENSHGLG00000000477	BMS1	99	83.281	Heterocephalus_glaber_female
ENSUMAG00000016523	BMS1	99	84.766	ENSHGLG00100002176	BMS1	99	83.359	Heterocephalus_glaber_male
ENSUMAG00000016523	BMS1	89	67.374	ENSHCOG00000017604	bms1	55	65.426	Hippocampus_comes
ENSUMAG00000016523	BMS1	97	72.562	ENSIPUG00000017855	bms1	51	67.606	Ictalurus_punctatus
ENSUMAG00000016523	BMS1	99	88.612	ENSSTOG00000015063	BMS1	99	88.846	Ictidomys_tridecemlineatus
ENSUMAG00000016523	BMS1	99	87.461	ENSJJAG00000017328	Bms1	99	86.755	Jaculus_jaculus
ENSUMAG00000016523	BMS1	62	62.167	ENSKMAG00000021982	bms1	81	73.624	Kryptolebias_marmoratus
ENSUMAG00000016523	BMS1	87	66.453	ENSLBEG00000028208	bms1	99	60.789	Labrus_bergylta
ENSUMAG00000016523	BMS1	99	61.449	ENSLACG00000001600	BMS1	100	61.674	Latimeria_chalumnae
ENSUMAG00000016523	BMS1	84	74.831	ENSLOCG00000012914	bms1	99	63.199	Lepisosteus_oculatus
ENSUMAG00000016523	BMS1	99	87.626	ENSLAFG00000006250	BMS1	99	88.231	Loxodonta_africana
ENSUMAG00000016523	BMS1	84	90.511	ENSMFAG00000037771	BMS1	99	91.423	Macaca_fascicularis
ENSUMAG00000016523	BMS1	90	76.718	ENSMMUG00000007426	-	99	76.289	Macaca_mulatta
ENSUMAG00000016523	BMS1	85	72.084	ENSMLEG00000029084	-	97	71.809	Mandrillus_leucophaeus
ENSUMAG00000016523	BMS1	99	59.411	ENSMAMG00000020855	bms1	88	74.817	Mastacembelus_armatus
ENSUMAG00000016523	BMS1	97	61.384	ENSMZEG00005005663	bms1	99	61.957	Maylandia_zebra
ENSUMAG00000016523	BMS1	95	71.895	ENSMGAG00000001170	BMS1	99	72.574	Meleagris_gallopavo
ENSUMAG00000016523	BMS1	99	86.261	ENSMAUG00000002195	Bms1	99	85.948	Mesocricetus_auratus
ENSUMAG00000016523	BMS1	99	89.813	ENSMICG00000009977	BMS1	99	89.813	Microcebus_murinus
ENSUMAG00000016523	BMS1	99	85.257	ENSMOCG00000002038	Bms1	99	85.491	Microtus_ochrogaster
ENSUMAG00000016523	BMS1	86	67.769	ENSMMOG00000000977	bms1	91	73.843	Mola_mola
ENSUMAG00000016523	BMS1	99	79.077	ENSMODG00000001177	BMS1	99	79.477	Monodelphis_domestica
ENSUMAG00000016523	BMS1	99	60.541	ENSMALG00000009680	bms1	99	59.474	Monopterus_albus
ENSUMAG00000016523	BMS1	73	95.388	MGP_CAROLIEiJ_G0028785	-	85	95.388	Mus_caroli
ENSUMAG00000016523	BMS1	99	84.615	ENSMUSG00000030138	Bms1	99	84.771	Mus_musculus
ENSUMAG00000016523	BMS1	99	85.058	MGP_PahariEiJ_G0022539	Bms1	99	85.214	Mus_pahari
ENSUMAG00000016523	BMS1	99	84.550	MGP_SPRETEiJ_G0029816	Bms1	100	84.705	Mus_spretus
ENSUMAG00000016523	BMS1	100	97.109	ENSMPUG00000017276	BMS1	100	97.109	Mustela_putorius_furo
ENSUMAG00000016523	BMS1	99	91.037	ENSMLUG00000003260	BMS1	99	90.881	Myotis_lucifugus
ENSUMAG00000016523	BMS1	95	81.874	ENSNGAG00000015258	Bms1	99	81.592	Nannospalax_galili
ENSUMAG00000016523	BMS1	99	88.776	ENSNLEG00000015791	BMS1	99	88.698	Nomascus_leucogenys
ENSUMAG00000016523	BMS1	81	95.952	ENSOPRG00000005195	BMS1	81	95.952	Ochotona_princeps
ENSUMAG00000016523	BMS1	99	84.766	ENSODEG00000005554	BMS1	99	84.297	Octodon_degus
ENSUMAG00000016523	BMS1	90	68.102	ENSONIG00000007227	bms1	99	61.949	Oreochromis_niloticus
ENSUMAG00000016523	BMS1	100	76.959	ENSOANG00000000662	-	100	77.090	Ornithorhynchus_anatinus
ENSUMAG00000016523	BMS1	99	87.578	ENSOCUG00000005354	BMS1	99	86.973	Oryctolagus_cuniculus
ENSUMAG00000016523	BMS1	88	68.167	ENSORLG00000014655	bms1	99	68.750	Oryzias_latipes
ENSUMAG00000016523	BMS1	88	68.123	ENSORLG00020016246	bms1	81	68.493	Oryzias_latipes_hni
ENSUMAG00000016523	BMS1	88	68.659	ENSORLG00015014183	bms1	87	67.899	Oryzias_latipes_hsok
ENSUMAG00000016523	BMS1	88	69.763	ENSOMEG00000015042	bms1	54	66.922	Oryzias_melastigma
ENSUMAG00000016523	BMS1	99	90.450	ENSOGAG00000006511	BMS1	99	89.907	Otolemur_garnettii
ENSUMAG00000016523	BMS1	99	90.676	ENSOARG00000003900	BMS1	99	90.987	Ovis_aries
ENSUMAG00000016523	BMS1	99	86.906	ENSPPAG00000027837	BMS1	99	86.360	Pan_paniscus
ENSUMAG00000016523	BMS1	100	94.712	ENSPPRG00000001311	BMS1	100	94.712	Panthera_pardus
ENSUMAG00000016523	BMS1	100	93.157	ENSPTIG00000009652	BMS1	100	93.079	Panthera_tigris_altaica
ENSUMAG00000016523	BMS1	99	90.640	ENSPTRG00000002441	BMS1	99	90.250	Pan_troglodytes
ENSUMAG00000016523	BMS1	100	71.061	ENSPSIG00000006481	BMS1	99	73.012	Pelodiscus_sinensis
ENSUMAG00000016523	BMS1	99	79.300	ENSPEMG00000022467	Bms1	99	78.988	Peromyscus_maniculatus_bairdii
ENSUMAG00000016523	BMS1	95	93.960	ENSPCIG00000001339	BMS1	99	86.158	Phascolarctos_cinereus
ENSUMAG00000016523	BMS1	79	74.631	ENSPFOG00000015180	bms1	97	66.202	Poecilia_formosa
ENSUMAG00000016523	BMS1	79	74.877	ENSPMEG00000023176	bms1	92	65.581	Poecilia_mexicana
ENSUMAG00000016523	BMS1	79	74.752	ENSPREG00000002695	bms1	95	67.200	Poecilia_reticulata
ENSUMAG00000016523	BMS1	61	87.964	ENSPPYG00000002836	-	99	87.452	Pongo_abelii
ENSUMAG00000016523	BMS1	73	94.558	ENSPCAG00000014528	BMS1	73	94.558	Procavia_capensis
ENSUMAG00000016523	BMS1	95	85.218	ENSPCOG00000023834	-	100	85.218	Propithecus_coquereli
ENSUMAG00000016523	BMS1	99	88.447	ENSPVAG00000000725	BMS1	99	89.548	Pteropus_vampyrus
ENSUMAG00000016523	BMS1	82	82.136	ENSRNOG00000006576	Bms1	100	83.080	Rattus_norvegicus
ENSUMAG00000016523	BMS1	99	89.088	ENSRROG00000040101	BMS1	99	88.620	Rhinopithecus_roxellana
ENSUMAG00000016523	BMS1	74	45.681	YPL217C	-	82	46.186	Saccharomyces_cerevisiae
ENSUMAG00000016523	BMS1	99	89.945	ENSSBOG00000035778	BMS1	99	90.101	Saimiri_boliviensis_boliviensis
ENSUMAG00000016523	BMS1	99	78.264	ENSSHAG00000005062	BMS1	99	78.341	Sarcophilus_harrisii
ENSUMAG00000016523	BMS1	99	62.337	ENSSFOG00015022313	bms1	99	61.676	Scleropages_formosus
ENSUMAG00000016523	BMS1	70	78.595	ENSSARG00000014407	BMS1	100	78.818	Sorex_araneus
ENSUMAG00000016523	BMS1	99	73.062	ENSSPUG00000014454	BMS1	99	72.657	Sphenodon_punctatus
ENSUMAG00000016523	BMS1	99	92.140	ENSSSCG00000010198	BMS1	99	91.829	Sus_scrofa
ENSUMAG00000016523	BMS1	99	72.560	ENSTGUG00000006302	-	99	72.311	Taeniopygia_guttata
ENSUMAG00000016523	BMS1	87	64.469	ENSTRUG00000008028	bms1	92	70.276	Takifugu_rubripes
ENSUMAG00000016523	BMS1	99	58.783	ENSTNIG00000006216	bms1	84	70.709	Tetraodon_nigroviridis
ENSUMAG00000016523	BMS1	61	92.126	ENSTBEG00000001673	-	64	92.126	Tupaia_belangeri
ENSUMAG00000016523	BMS1	99	88.932	ENSTTRG00000007983	BMS1	99	88.698	Tursiops_truncatus
ENSUMAG00000016523	BMS1	100	99.765	ENSUAMG00000023996	BMS1	100	99.765	Ursus_americanus
ENSUMAG00000016523	BMS1	88	84.947	ENSVPAG00000007477	BMS1	99	85.827	Vicugna_pacos
ENSUMAG00000016523	BMS1	100	95.027	ENSVVUG00000021305	BMS1	100	95.027	Vulpes_vulpes
ENSUMAG00000016523	BMS1	98	64.933	ENSXETG00000008158	bms1	99	65.785	Xenopus_tropicalis
ENSUMAG00000016523	BMS1	86	66.527	ENSXCOG00000000506	bms1	96	75.550	Xiphophorus_couchianus
ENSUMAG00000016523	BMS1	85	66.829	ENSXMAG00000014236	bms1	97	65.891	Xiphophorus_maculatus