EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUMAG00000016729 (Gene tree)
Gene ID: 103670253
Gene Symbol: SETX
Alias: -
Full Name: senataxin
Gene Type: protein_coding
Species: Ursus_maritimus
Status: putative
Strand: Plus strand
Length: 78814 bases
Position: chrKK498643.1:652898-731711
Accession: 103670253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUMAP00000023071	UvrD-helicase	PF00580.21	3.2e-08	1	1
ENSUMAP00000023071	ResIII	PF04851.15	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUMAT00000027351	SETX-203	2520	-	ENSUMAP00000023071	839 (aa)	-	-
ENSUMAT00000027343	SETX-202	7965	-	ENSUMAP00000023065	2654 (aa)	-	-
ENSUMAT00000027342	SETX-201	8079	-	ENSUMAP00000023064	2692 (aa)	XP_008696902	UPI0004DFD1D2

Gene Model

Click here to download ENSUMAG00000016729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUMAG00000016729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUMAG00000016729	SETX	92	88.129	ENSG00000107290	SETX	84	86.507	Homo_sapiens
ENSUMAG00000016729	SETX	96	87.823	ENSCAFG00020024489	SETX	96	87.823	Canis_lupus_dingo
ENSUMAG00000016729	SETX	98	79.356	ENSTSYG00000030808	-	98	79.356	Carlito_syrichta
ENSUMAG00000016729	SETX	98	85.562	ENSGGOG00000027664	SETX	99	85.562	Gorilla_gorilla
ENSUMAG00000016729	SETX	98	84.970	ENSPPAG00000004108	SETX	99	84.970	Pan_paniscus
ENSUMAG00000016729	SETX	98	84.852	ENSPTRG00000021495	SETX	99	84.852	Pan_troglodytes